RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
LINC01550-202ENST00000502187 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
LINC01550-202ENST00000502187 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
LINC01550-202ENST00000502187 PRDM11Q9NQV5 511 aa11.84□□□□□ -0.51
LINC01550-202ENST00000502187 AXIN2Q9Y2T1 843 aa11.84□□□□□ -0.51
LINC01550-202ENST00000502187 ADAMTS2O95450 1211 aa11.83□□□□□ -0.52
LINC01550-202ENST00000502187 RIPK4P57078 832 aa11.83□□□□□ -0.52
LINC01550-202ENST00000502187 NFE2L2Q16236 605 aa11.83□□□□□ -0.52
LINC01550-202ENST00000502187 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
LINC01550-202ENST00000502187 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
LINC01550-202ENST00000502187 ERBB3P21860 1342 aa11.82□□□□□ -0.52
LINC01550-202ENST00000502187 LMO7Q8WWI1 1683 aa11.82□□□□□ -0.52
LINC01550-202ENST00000502187 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
LINC01550-202ENST00000502187 E9PSI1 815 aa11.81□□□□□ -0.52
LINC01550-202ENST00000502187 WDR63Q8IWG1 891 aa11.81□□□□□ -0.52
LINC01550-202ENST00000502187 SLFN5Q08AF3 891 aa11.81□□□□□ -0.52
LINC01550-202ENST00000502187 NBPF6Q5VWK0 638 aa11.81□□□□□ -0.52
LINC01550-202ENST00000502187 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
LINC01550-202ENST00000502187 NBPF4Q96M43 638 aa11.81□□□□□ -0.52
LINC01550-202ENST00000502187 NCAPD2Q15021 1401 aa11.8□□□□□ -0.52
LINC01550-202ENST00000502187 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
LINC01550-202ENST00000502187 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
LINC01550-202ENST00000502187 CSB-PGBD3P0DP91 1061 aa11.8□□□□□ -0.52
LINC01550-202ENST00000502187 JCADQ9P266 1359 aa11.79□□□□□ -0.52
LINC01550-202ENST00000502187 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
LINC01550-202ENST00000502187 EVA1CP58658 441 aa11.79□□□□□ -0.52
LINC01550-202ENST00000502187 DUSP27Q5VZP5 1158 aa11.79□□□□□ -0.52
LINC01550-202ENST00000502187 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
LINC01550-202ENST00000502187 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
LINC01550-202ENST00000502187 BRPF1P55201 1214 aaPredicted RBP11.78□□□□□ -0.52
LINC01550-202ENST00000502187 GAS2L2Q8NHY3 880 aa11.78□□□□□ -0.52
LINC01550-202ENST00000502187 BTG4Q9NY30 223 aa11.78□□□□□ -0.52
LINC01550-202ENST00000502187 COL5A2P05997 1499 aaPredicted RBP11.77□□□□□ -0.52
LINC01550-202ENST00000502187 IL16Q14005 1332 aa11.77□□□□□ -0.52
LINC01550-202ENST00000502187 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
LINC01550-202ENST00000502187 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.53
LINC01550-202ENST00000502187 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
LINC01550-202ENST00000502187 SUPT16HQ9Y5B9 1047 aaKnown RBP11.77□□□□□ -0.53
LINC01550-202ENST00000502187 MTHFSDQ2M296 383 aaKnown RBP11.77□□□□□ -0.53
LINC01550-202ENST00000502187 MYH16Q9H6N6 1097 aa11.77□□□□□ -0.53
LINC01550-202ENST00000502187 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
LINC01550-202ENST00000502187 PLCH1Q4KWH8 1693 aa11.76□□□□□ -0.53
LINC01550-202ENST00000502187 NEFLP07196 543 aa11.76□□□□□ -0.53
LINC01550-202ENST00000502187 NGLY1Q96IV0 654 aa11.76□□□□□ -0.53
LINC01550-202ENST00000502187 WDR17Q8IZU2 1322 aa11.75□□□□□ -0.53
LINC01550-202ENST00000502187 MEX3CQ5U5Q3 659 aaKnown RBP11.75□□□□□ -0.53
LINC01550-202ENST00000502187 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
LINC01550-202ENST00000502187 C8orf37Q96NL8 207 aa11.75□□□□□ -0.53
LINC01550-202ENST00000502187 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
LINC01550-202ENST00000502187 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
LINC01550-202ENST00000502187 TOM1L2Q6ZVM7 507 aa11.75□□□□□ -0.53
LINC01550-202ENST00000502187 RTF1Q92541 710 aaKnown RBP11.75□□□□□ -0.53
LINC01550-202ENST00000502187 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
LINC01550-202ENST00000502187 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
LINC01550-202ENST00000502187 SPATA31A6Q5VVP1 1343 aa11.74□□□□□ -0.53
LINC01550-202ENST00000502187 LRRC37A3O60309 1634 aa11.74□□□□□ -0.53
LINC01550-202ENST00000502187 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
LINC01550-202ENST00000502187 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
LINC01550-202ENST00000502187 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
LINC01550-202ENST00000502187 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
LINC01550-202ENST00000502187 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
LINC01550-202ENST00000502187 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
LINC01550-202ENST00000502187 DCTN1Q14203 1278 aa11.73□□□□□ -0.53
LINC01550-202ENST00000502187 PKD1L3Q7Z443 1732 aa11.73□□□□□ -0.53
LINC01550-202ENST00000502187 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
LINC01550-202ENST00000502187 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
LINC01550-202ENST00000502187 TATP17735 454 aaPredicted RBP11.72□□□□□ -0.53
LINC01550-202ENST00000502187 MEGF6O75095 1541 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 GNAI1P63096 354 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 MCM10Q7L590 875 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 TSR2Q969E8 191 aaKnown RBP11.72□□□□□ -0.53
LINC01550-202ENST00000502187 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
LINC01550-202ENST00000502187 NRAPQ86VF7 1730 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
LINC01550-202ENST00000502187 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.53
LINC01550-202ENST00000502187 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.53
LINC01550-202ENST00000502187 CRB1P82279 1406 aa11.71□□□□□ -0.54
LINC01550-202ENST00000502187 AKAP4Q5JQC9 854 aa11.7□□□□□ -0.54
LINC01550-202ENST00000502187 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
LINC01550-202ENST00000502187 CARD10Q9BWT7 1032 aa11.7□□□□□ -0.54
LINC01550-202ENST00000502187 RNF123Q5XPI4 1314 aa11.7□□□□□ -0.54
LINC01550-202ENST00000502187 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
LINC01550-202ENST00000502187 WNK3Q9BYP7 1800 aa11.69□□□□□ -0.54
LINC01550-202ENST00000502187 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
LINC01550-202ENST00000502187 SPG7Q9UQ90 795 aa11.69□□□□□ -0.54
LINC01550-202ENST00000502187 CT47B1P0C2W7 299 aaPredicted RBP11.68□□□□□ -0.54
LINC01550-202ENST00000502187 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
LINC01550-202ENST00000502187 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
LINC01550-202ENST00000502187 MBIPQ9NS73 344 aa11.68□□□□□ -0.54
LINC01550-202ENST00000502187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC01550-202ENST00000502187 SCN11AQ9UI33 1791 aa11.68□□□□□ -0.54
LINC01550-202ENST00000502187 UNC5CLQ8IV45 518 aa11.68□□□□□ -0.54
LINC01550-202ENST00000502187 USP21Q9UK80 565 aa11.68□□□□□ -0.54
LINC01550-202ENST00000502187 LRP6O75581 1613 aa11.68□□□□□ -0.54
LINC01550-202ENST00000502187 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
LINC01550-202ENST00000502187 IL2RBP14784 551 aa11.67□□□□□ -0.54
LINC01550-202ENST00000502187 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms