RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 RREB1Q92766 1687 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 SPATA31A3Q5VYP0 1347 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 GOLGA8CPA6NN73 597 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 PPP1R3GB7ZBB8 358 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 BHMG1C9JSJ3 638 aaPredicted RBP8.59□□□□□ -1.03
SPTA1-209ENST00000498708 APBA3O96018 575 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 EPAS1Q99814 870 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 DAPK1P53355 1430 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 E9PCH4 1651 aa8.59□□□□□ -1.03
SPTA1-209ENST00000498708 NUTM2FA1L443 756 aa8.58□□□□□ -1.04
SPTA1-209ENST00000498708 FAM83GA6ND36 823 aa8.58□□□□□ -1.04
SPTA1-209ENST00000498708 DPYSL4O14531 572 aa8.58□□□□□ -1.04
SPTA1-209ENST00000498708 MRPL50Q8N5N7 158 aaKnown RBP8.58□□□□□ -1.04
SPTA1-209ENST00000498708 ANKRD30AQ9BXX3 1397 aa8.58□□□□□ -1.04
SPTA1-209ENST00000498708 GIGYF1O75420 1035 aaPredicted RBP8.57□□□□□ -1.04
SPTA1-209ENST00000498708 NBPF8Q3BBV2 869 aa8.57□□□□□ -1.04
SPTA1-209ENST00000498708 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
SPTA1-209ENST00000498708 NRAPQ86VF7 1730 aa8.57□□□□□ -1.04
SPTA1-209ENST00000498708 HAP1P54257 671 aaPredicted RBP8.56□□□□□ -1.04
SPTA1-209ENST00000498708 NRKQ7Z2Y5 1582 aa8.56□□□□□ -1.04
SPTA1-209ENST00000498708 IQGAP3Q86VI3 1631 aa8.55□□□□□ -1.04
SPTA1-209ENST00000498708 ZNF326Q5BKZ1 582 aaKnown RBP8.55□□□□□ -1.04
SPTA1-209ENST00000498708 KRT28Q7Z3Y7 464 aa8.55□□□□□ -1.04
SPTA1-209ENST00000498708 PDGFDQ9GZP0 370 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-209ENST00000498708 PARD3Q8TEW0 1356 aa8.55□□□□□ -1.04
SPTA1-209ENST00000498708 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
SPTA1-209ENST00000498708 ADGRB2O60241 1585 aa8.55□□□□□ -1.04
SPTA1-209ENST00000498708 MYOM1P52179 1685 aa8.55□□□□□ -1.04
SPTA1-209ENST00000498708 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
SPTA1-209ENST00000498708 THSD7AQ9UPZ6 1657 aa8.54□□□□□ -1.04
SPTA1-209ENST00000498708 LRPPRCP42704 1394 aaKnown RBP8.54□□□□□ -1.04
SPTA1-209ENST00000498708 FAM50AQ14320 339 aaKnown RBP8.54□□□□□ -1.04
SPTA1-209ENST00000498708 PAXIP1Q6ZW49 1069 aaPredicted RBP8.54□□□□□ -1.04
SPTA1-209ENST00000498708 WNT2BQ93097 391 aa8.54□□□□□ -1.04
SPTA1-209ENST00000498708 BTG4Q9NY30 223 aa8.54□□□□□ -1.04
SPTA1-209ENST00000498708 RABGEF1Q9UJ41 708 aa8.54□□□□□ -1.04
SPTA1-209ENST00000498708 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-209ENST00000498708 PTPN5P54829 565 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 THSD4Q6ZMP0 1018 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 FAM196AQ6ZSG2 479 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 CFAP44Q96MT7 982 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 SYT17Q9BSW7 474 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 SPATA31A5Q5VU36 1347 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 SPATA31A7Q8IWB4 1347 aa8.53□□□□□ -1.04
SPTA1-209ENST00000498708 ZBTB7AO95365 584 aa8.52□□□□□ -1.05
SPTA1-209ENST00000498708 E2F4Q16254 413 aa8.52□□□□□ -1.05
SPTA1-209ENST00000498708 C6orf132Q5T0Z8 1188 aa8.52□□□□□ -1.05
SPTA1-209ENST00000498708 FHDC1Q9C0D6 1143 aaPredicted RBP8.52□□□□□ -1.05
SPTA1-209ENST00000498708 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
SPTA1-209ENST00000498708 CDC42BPGQ6DT37 1551 aa8.52□□□□□ -1.05
SPTA1-209ENST00000498708 NEXMIFQ5QGS0 1516 aa8.51□□□□□ -1.05
SPTA1-209ENST00000498708 COL9A1P20849 921 aa8.51□□□□□ -1.05
SPTA1-209ENST00000498708 PDIA6Q15084 440 aa8.51□□□□□ -1.05
SPTA1-209ENST00000498708 HFM1A2PYH4 1435 aa8.51□□□□□ -1.05
SPTA1-209ENST00000498708 PROX2Q3B8N5 592 aa8.5□□□□□ -1.05
SPTA1-209ENST00000498708 TNS3Q68CZ2 1445 aa8.5□□□□□ -1.05
SPTA1-209ENST00000498708 LMOD2Q6P5Q4 547 aa8.5□□□□□ -1.05
SPTA1-209ENST00000498708 LAPTM4BQ86VI4 370 aa8.5□□□□□ -1.05
SPTA1-209ENST00000498708 DDX12PQ92771 950 aa8.5□□□□□ -1.05
SPTA1-209ENST00000498708 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
SPTA1-209ENST00000498708 SHANK3Q9BYB0 1731 aa8.49□□□□□ -1.05
SPTA1-209ENST00000498708 CCDC144AA2RUR9 1427 aa8.49□□□□□ -1.05
SPTA1-209ENST00000498708 NAIPQ13075 1403 aa8.49□□□□□ -1.05
SPTA1-209ENST00000498708 PRAG1Q86YV5 1406 aa8.49□□□□□ -1.05
SPTA1-209ENST00000498708 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
SPTA1-209ENST00000498708 ANKK1Q8NFD2 765 aa8.49□□□□□ -1.05
SPTA1-209ENST00000498708 ARIH1Q9Y4X5 557 aaPredicted RBP8.49□□□□□ -1.05
SPTA1-209ENST00000498708 ITGAEP38570 1179 aa8.48□□□□□ -1.05
SPTA1-209ENST00000498708 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
SPTA1-209ENST00000498708 KIF1AQ12756 1690 aa8.47□□□□□ -1.05
SPTA1-209ENST00000498708 NBR1Q14596 966 aa8.47□□□□□ -1.05
SPTA1-209ENST00000498708 PPARGC1BQ86YN6 1023 aaKnown RBP8.47□□□□□ -1.05
SPTA1-209ENST00000498708 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
SPTA1-209ENST00000498708 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
SPTA1-209ENST00000498708 FMN2Q9NZ56 1722 aa8.46□□□□□ -1.05
SPTA1-209ENST00000498708 MAP3K7O43318 606 aa8.46□□□□□ -1.06
SPTA1-209ENST00000498708 PSME1Q06323 249 aa8.46□□□□□ -1.06
SPTA1-209ENST00000498708 DLC1Q96QB1 1528 aa8.45□□□□□ -1.06
SPTA1-209ENST00000498708 TRIM6-TRIM34B2RNG4 842 aa8.45□□□□□ -1.06
SPTA1-209ENST00000498708 HSPA6P17066 643 aa8.45□□□□□ -1.06
SPTA1-209ENST00000498708 PDE3BQ13370 1112 aa8.45□□□□□ -1.06
SPTA1-209ENST00000498708 GPR162Q16538 588 aa8.45□□□□□ -1.06
SPTA1-209ENST00000498708 SBNO1A3KN83 1393 aa8.45□□□□□ -1.06
SPTA1-209ENST00000498708 PLEKHH1Q9ULM0 1364 aa8.45□□□□□ -1.06
SPTA1-209ENST00000498708 STK26Q9P289 416 aa8.44□□□□□ -1.06
SPTA1-209ENST00000498708 USP35Q9P2H5 1018 aa8.44□□□□□ -1.06
SPTA1-209ENST00000498708 ARHGEF10O15013 1369 aa8.44□□□□□ -1.06
SPTA1-209ENST00000498708 CLTCL1P53675 1640 aa8.43□□□□□ -1.06
SPTA1-209ENST00000498708 COL13A1Q5TAT6 717 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-209ENST00000498708 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
SPTA1-209ENST00000498708 PACS2Q86VP3 889 aa8.43□□□□□ -1.06
SPTA1-209ENST00000498708 ZFRQ96KR1 1074 aaKnown RBP8.43□□□□□ -1.06
SPTA1-209ENST00000498708 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
SPTA1-209ENST00000498708 NUP155O75694 1391 aa8.43□□□□□ -1.06
SPTA1-209ENST00000498708 TECPR2O15040 1411 aa8.43□□□□□ -1.06
SPTA1-209ENST00000498708 RRBP1Q9P2E9 1410 aaKnown RBP8.43□□□□□ -1.06
SPTA1-209ENST00000498708 SOWAHBA6NEL2 793 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms