RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 C10orf71Q711Q0 1435 aa7.72□□□□□ -1.17
CSTF1-207ENST00000498689 MNX1P50219 401 aaPredicted RBP7.72□□□□□ -1.17
CSTF1-207ENST00000498689 MSL1Q68DK7 614 aa7.72□□□□□ -1.17
CSTF1-207ENST00000498689 KIF13BQ9NQT8 1826 aa7.72□□□□□ -1.17
CSTF1-207ENST00000498689 EEA1Q15075 1411 aa7.71□□□□□ -1.17
CSTF1-207ENST00000498689 USP54Q70EL1 1684 aa7.71□□□□□ -1.18
CSTF1-207ENST00000498689 WAPLQ7Z5K2 1190 aa7.71□□□□□ -1.18
CSTF1-207ENST00000498689 AIDAQ96BJ3 306 aa7.71□□□□□ -1.18
CSTF1-207ENST00000498689 PLSCR2Q9NRY7 297 aa7.71□□□□□ -1.18
CSTF1-207ENST00000498689 LY75O60449 1722 aa7.71□□□□□ -1.18
CSTF1-207ENST00000498689 COL18A1P39060 1754 aa7.71□□□□□ -1.18
CSTF1-207ENST00000498689 PLEKHH1Q9ULM0 1364 aa7.71□□□□□ -1.18
CSTF1-207ENST00000498689 C11orf95C9JLR9 678 aaPredicted RBP7.7□□□□□ -1.18
CSTF1-207ENST00000498689 ZC3H6P61129 1189 aaKnown RBP7.7□□□□□ -1.18
CSTF1-207ENST00000498689 WBP1LQ9NX94 342 aa7.7□□□□□ -1.18
CSTF1-207ENST00000498689 CD2APQ9Y5K6 639 aa7.7□□□□□ -1.18
CSTF1-207ENST00000498689 PPLO60437 1756 aa7.69□□□□□ -1.18
CSTF1-207ENST00000498689 KCNQ4P56696 695 aa7.69□□□□□ -1.18
CSTF1-207ENST00000498689 EVA1CP58658 441 aa7.69□□□□□ -1.18
CSTF1-207ENST00000498689 ZNF326Q5BKZ1 582 aaKnown RBP7.69□□□□□ -1.18
CSTF1-207ENST00000498689 HABP4Q5JVS0 413 aaKnown RBP7.69□□□□□ -1.18
CSTF1-207ENST00000498689 TSPYL2Q9H2G4 693 aaPredicted RBP7.69□□□□□ -1.18
CSTF1-207ENST00000498689 TRPM1Q7Z4N2 1603 aa7.69□□□□□ -1.18
CSTF1-207ENST00000498689 MS4A3Q96HJ5 214 aa7.68□□□□□ -1.18
CSTF1-207ENST00000498689 CNTNAP1P78357 1384 aa7.68□□□□□ -1.18
CSTF1-207ENST00000498689 BCL9O00512 1426 aa7.68□□□□□ -1.18
CSTF1-207ENST00000498689 VCANP13611 3396 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 LTBP1Q14766 1721 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 ITSN1Q15811 1721 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 TAF1LQ8IZX4 1826 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 POTEB2H3BUK9 544 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 VEGFBP49765 207 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 SOX10P56693 466 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 DDB1Q16531 1140 aa7.67□□□□□ -1.18
CSTF1-207ENST00000498689 TIAM2Q8IVF5 1701 aa7.66□□□□□ -1.18
CSTF1-207ENST00000498689 FXR1P51114 621 aaKnown RBP eCLIP7.66□□□□□ -1.18
CSTF1-207ENST00000498689 OTUD5Q96G74 571 aa7.66□□□□□ -1.18
CSTF1-207ENST00000498689 MCOLN1Q9GZU1 580 aa7.66□□□□□ -1.18
CSTF1-207ENST00000498689 TFCP2L1Q9NZI6 479 aa7.66□□□□□ -1.18
CSTF1-207ENST00000498689 THRAP3Q9Y2W1 955 aaKnown RBP7.66□□□□□ -1.18
CSTF1-207ENST00000498689 COL5A2P05997 1499 aaPredicted RBP7.66□□□□□ -1.18
CSTF1-207ENST00000498689 C9orf131Q5VYM1 1079 aa7.65□□□□□ -1.18
CSTF1-207ENST00000498689 COL23A1Q86Y22 540 aaPredicted RBP7.65□□□□□ -1.18
CSTF1-207ENST00000498689 SLC17A8Q8NDX2 589 aa7.65□□□□□ -1.18
CSTF1-207ENST00000498689 ACSBG1Q96GR2 724 aa7.65□□□□□ -1.18
CSTF1-207ENST00000498689 TRIOBPQ9H2D6 2365 aa7.64□□□□□ -1.19
CSTF1-207ENST00000498689 BRCA2P51587 3418 aa7.64□□□□□ -1.19
CSTF1-207ENST00000498689 MYOM3Q5VTT5 1437 aa7.64□□□□□ -1.19
CSTF1-207ENST00000498689 ARHGAP27Q6ZUM4 889 aa7.64□□□□□ -1.19
CSTF1-207ENST00000498689 CHIC2Q9UKJ5 165 aa7.64□□□□□ -1.19
CSTF1-207ENST00000498689 TOGARAM1Q9Y4F4 1720 aa7.64□□□□□ -1.19
CSTF1-207ENST00000498689 C5P01031 1676 aa7.63□□□□□ -1.19
CSTF1-207ENST00000498689 THSD7BQ9C0I4 1608 aa7.63□□□□□ -1.19
CSTF1-207ENST00000498689 SPTBN5Q9NRC6 3674 aaKnown RBP7.63□□□□□ -1.19
CSTF1-207ENST00000498689 KDM2BQ8NHM5 1336 aa7.63□□□□□ -1.19
CSTF1-207ENST00000498689 HIRIP3Q9BW71 556 aaPredicted RBP7.63□□□□□ -1.19
CSTF1-207ENST00000498689 STK26Q9P289 416 aa7.63□□□□□ -1.19
CSTF1-207ENST00000498689 TSKSQ9UJT2 592 aa7.63□□□□□ -1.19
CSTF1-207ENST00000498689 CRB1P82279 1406 aa7.62□□□□□ -1.19
CSTF1-207ENST00000498689 PLEKHG2Q9H7P9 1386 aa7.62□□□□□ -1.19
CSTF1-207ENST00000498689 NUTM2GQ5VZR2 741 aa7.62□□□□□ -1.19
CSTF1-207ENST00000498689 SMIM5Q71RC9 77 aa7.62□□□□□ -1.19
CSTF1-207ENST00000498689 METRNQ9UJH8 293 aa7.62□□□□□ -1.19
CSTF1-207ENST00000498689 RANBP2P49792 3224 aaKnown RBP7.62□□□□□ -1.19
CSTF1-207ENST00000498689 MEGF6O75095 1541 aa7.62□□□□□ -1.19
CSTF1-207ENST00000498689 UBR3Q6ZT12 1888 aa7.62□□□□□ -1.19
CSTF1-207ENST00000498689 DAPK1P53355 1430 aa7.61□□□□□ -1.19
CSTF1-207ENST00000498689 CEP290O15078 2479 aa7.61□□□□□ -1.19
CSTF1-207ENST00000498689 USP6P35125 1406 aa7.61□□□□□ -1.19
CSTF1-207ENST00000498689 CACNA1AO00555 2505 aa7.6□□□□□ -1.19
CSTF1-207ENST00000498689 BRD4O60885 1362 aaPredicted RBP7.6□□□□□ -1.19
CSTF1-207ENST00000498689 ATMINO43313 823 aaPredicted RBP7.6□□□□□ -1.19
CSTF1-207ENST00000498689 ASTLQ6HA08 431 aaPredicted RBP7.6□□□□□ -1.19
CSTF1-207ENST00000498689 BCS1LQ9Y276 419 aa7.6□□□□□ -1.19
CSTF1-207ENST00000498689 CENPFP49454 3210 aa7.59□□□□□ -1.19
CSTF1-207ENST00000498689 LAMB4A4D0S4 1761 aa7.59□□□□□ -1.19
CSTF1-207ENST00000498689 DICER1Q9UPY3 1922 aaKnown RBP7.59□□□□□ -1.19
CSTF1-207ENST00000498689 MIER1Q8N108 512 aa7.59□□□□□ -1.19
CSTF1-207ENST00000498689 SLC39A7Q92504 469 aa7.59□□□□□ -1.19
CSTF1-207ENST00000498689 GCC1Q96CN9 775 aa7.59□□□□□ -1.19
CSTF1-207ENST00000498689 DOT1LQ8TEK3 1739 aa7.58□□□□□ -1.2
CSTF1-207ENST00000498689 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
CSTF1-207ENST00000498689 POTECB2RU33 542 aa7.58□□□□□ -1.2
CSTF1-207ENST00000498689 CCDC61Q9Y6R9 512 aa7.58□□□□□ -1.2
CSTF1-207ENST00000498689 PRR36Q9H6K5 1346 aa7.57□□□□□ -1.2
CSTF1-207ENST00000498689 POTEJP0CG39 1038 aa7.57□□□□□ -1.2
CSTF1-207ENST00000498689 DGKZQ13574 1117 aa7.57□□□□□ -1.2
CSTF1-207ENST00000498689 RNF181Q9P0P0 153 aa7.57□□□□□ -1.2
CSTF1-207ENST00000498689 ANKRD30AQ9BXX3 1397 aa7.57□□□□□ -1.2
CSTF1-207ENST00000498689 SPATA31E1Q6ZUB1 1445 aa7.56□□□□□ -1.2
CSTF1-207ENST00000498689 C7P10643 843 aa7.56□□□□□ -1.2
CSTF1-207ENST00000498689 ATN1P54259 1190 aaPredicted RBP7.56□□□□□ -1.2
CSTF1-207ENST00000498689 GPRASP1Q5JY77 1395 aa7.56□□□□□ -1.2
CSTF1-207ENST00000498689 A0A0G2JLW4 131 aa7.55□□□□□ -1.2
CSTF1-207ENST00000498689 POTEMA6NI47 508 aa7.55□□□□□ -1.2
CSTF1-207ENST00000498689 VEGFAP15692 232 aaPredicted RBP7.55□□□□□ -1.2
CSTF1-207ENST00000498689 KIF12Q96FN5 646 aa7.55□□□□□ -1.2
CSTF1-207ENST00000498689 ABCC6O95255 1503 aa7.55□□□□□ -1.2
CSTF1-207ENST00000498689 ERBB3P21860 1342 aa7.54□□□□□ -1.2
CSTF1-207ENST00000498689 EYSQ5T1H1 3165 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms