RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 HSP90AB2PQ58FF8 381 aa20.01■□□□□ 0.79
HDLBP-247ENST00000498595 USHBP1Q8N6Y0 703 aa20.01■□□□□ 0.79
HDLBP-247ENST00000498595 PPM1GO15355 546 aaPredicted RBP20■□□□□ 0.79
HDLBP-247ENST00000498595 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
HDLBP-247ENST00000498595 SLC27A3Q5K4L6 730 aa20■□□□□ 0.79
HDLBP-247ENST00000498595 MEGF6O75095 1541 aa20■□□□□ 0.79
HDLBP-247ENST00000498595 ATF5Q9Y2D1 282 aaPredicted RBP19.99■□□□□ 0.79
HDLBP-247ENST00000498595 BTAF1O14981 1849 aa19.98■□□□□ 0.79
HDLBP-247ENST00000498595 PDGFDQ9GZP0 370 aaPredicted RBP19.98■□□□□ 0.79
HDLBP-247ENST00000498595 MTFR1LQ9H019 292 aa19.98■□□□□ 0.79
HDLBP-247ENST00000498595 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
HDLBP-247ENST00000498595 MYOM1P52179 1685 aa19.97■□□□□ 0.79
HDLBP-247ENST00000498595 EMILIN1Q9Y6C2 1016 aa19.97■□□□□ 0.79
HDLBP-247ENST00000498595 PCDH11XQ9BZA7 1347 aa19.96■□□□□ 0.79
HDLBP-247ENST00000498595 PCDH11YQ9BZA8 1340 aa19.96■□□□□ 0.79
HDLBP-247ENST00000498595 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
HDLBP-247ENST00000498595 LRRC4BQ9NT99 713 aa19.94■□□□□ 0.78
HDLBP-247ENST00000498595 HMGB2P26583 209 aaKnown RBP19.93■□□□□ 0.78
HDLBP-247ENST00000498595 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
HDLBP-247ENST00000498595 KAT6BQ8WYB5 2073 aa19.92■□□□□ 0.78
HDLBP-247ENST00000498595 PTGER2P43116 358 aa19.92■□□□□ 0.78
HDLBP-247ENST00000498595 ZNF827Q17R98 1081 aa19.92■□□□□ 0.78
HDLBP-247ENST00000498595 TFCP2L1Q9NZI6 479 aa19.92■□□□□ 0.78
HDLBP-247ENST00000498595 DOT1LQ8TEK3 1739 aa19.92■□□□□ 0.78
HDLBP-247ENST00000498595 WASHC2AQ641Q2 1341 aa19.92■□□□□ 0.78
HDLBP-247ENST00000498595 CCNL1Q9UK58 526 aaPredicted RBP19.91■□□□□ 0.78
HDLBP-247ENST00000498595 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
HDLBP-247ENST00000498595 TNNT2P45379 298 aaPredicted RBP19.9■□□□□ 0.78
HDLBP-247ENST00000498595 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
HDLBP-247ENST00000498595 NSD2O96028 1365 aa19.89■□□□□ 0.77
HDLBP-247ENST00000498595 SLC16A10Q8TF71 515 aa19.89■□□□□ 0.77
HDLBP-247ENST00000498595 AKT1S1Q96B36 256 aa19.89■□□□□ 0.77
HDLBP-247ENST00000498595 ARXQ96QS3 562 aa19.88■□□□□ 0.77
HDLBP-247ENST00000498595 PANK3Q9H999 370 aa19.88■□□□□ 0.77
HDLBP-247ENST00000498595 POLKQ9UBT6 870 aa19.88■□□□□ 0.77
HDLBP-247ENST00000498595 SHANK3Q9BYB0 1731 aa19.88■□□□□ 0.77
HDLBP-247ENST00000498595 YY1P25490 414 aa19.87■□□□□ 0.77
HDLBP-247ENST00000498595 POLD1P28340 1107 aa19.87■□□□□ 0.77
HDLBP-247ENST00000498595 KCNQ4P56696 695 aa19.87■□□□□ 0.77
HDLBP-247ENST00000498595 MPRIPQ6WCQ1 1025 aa19.87■□□□□ 0.77
HDLBP-247ENST00000498595 FHDC1Q9C0D6 1143 aaPredicted RBP19.87■□□□□ 0.77
HDLBP-247ENST00000498595 CYP27B1O15528 508 aa19.85■□□□□ 0.77
HDLBP-247ENST00000498595 MSH5O43196 834 aa19.85■□□□□ 0.77
HDLBP-247ENST00000498595 SMARCC1Q92922 1105 aaPredicted RBP19.85■□□□□ 0.77
HDLBP-247ENST00000498595 EYA1Q99502 592 aa19.85■□□□□ 0.77
HDLBP-247ENST00000498595 SGIP1Q9BQI5 828 aa19.84■□□□□ 0.77
HDLBP-247ENST00000498595 SYT17Q9BSW7 474 aa19.84■□□□□ 0.77
HDLBP-247ENST00000498595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.775e-13■□□□□ 10.3
HDLBP-247ENST00000498595 PNPLA7Q6ZV29 1317 aa19.83■□□□□ 0.77
HDLBP-247ENST00000498595 ANKRD26Q9UPS8 1709 aa19.83■□□□□ 0.77
HDLBP-247ENST00000498595 MORC1Q86VD1 984 aa19.83■□□□□ 0.77
HDLBP-247ENST00000498595 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.77
HDLBP-247ENST00000498595 NCAPD2Q15021 1401 aa19.83■□□□□ 0.76
HDLBP-247ENST00000498595 PALLDQ8WX93 1383 aa19.83■□□□□ 0.76
HDLBP-247ENST00000498595 EIF4A2Q14240 407 aaKnown RBP19.81■□□□□ 0.76
HDLBP-247ENST00000498595 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
HDLBP-247ENST00000498595 LY75O60449 1722 aa19.81■□□□□ 0.76
HDLBP-247ENST00000498595 NKX1-1Q15270 411 aaPredicted RBP19.8■□□□□ 0.76
HDLBP-247ENST00000498595 IFNL2Q8IZJ0 200 aa19.8■□□□□ 0.76
HDLBP-247ENST00000498595 FLAD1Q8NFF5 587 aa19.79■□□□□ 0.76
HDLBP-247ENST00000498595 TMOD3Q9NYL9 352 aa19.79■□□□□ 0.76
HDLBP-247ENST00000498595 QSER1Q2KHR3 1735 aa19.79■□□□□ 0.76
HDLBP-247ENST00000498595 PKD1L3Q7Z443 1732 aa19.79■□□□□ 0.76
HDLBP-247ENST00000498595 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
HDLBP-247ENST00000498595 MAP3K5Q99683 1374 aa19.78■□□□□ 0.76
HDLBP-247ENST00000498595 PIGBQ92521 554 aa19.77■□□□□ 0.76
HDLBP-247ENST00000498595 AK7Q96M32 723 aa19.77■□□□□ 0.76
HDLBP-247ENST00000498595 PLEKHG2Q9H7P9 1386 aa19.77■□□□□ 0.76
HDLBP-247ENST00000498595 PHKG2P15735 406 aa19.76■□□□□ 0.75
HDLBP-247ENST00000498595 HSP90AB1P08238 724 aaKnown RBP19.75■□□□□ 0.75
HDLBP-247ENST00000498595 PLEKHO1Q53GL0 409 aaPredicted RBP19.75■□□□□ 0.75
HDLBP-247ENST00000498595 COL23A1Q86Y22 540 aaPredicted RBP19.75■□□□□ 0.75
HDLBP-247ENST00000498595 IGSF1Q8N6C5 1336 aa19.75■□□□□ 0.75
HDLBP-247ENST00000498595 GPR162Q16538 588 aa19.73■□□□□ 0.75
HDLBP-247ENST00000498595 C5P01031 1676 aa19.72■□□□□ 0.75
HDLBP-247ENST00000498595 LOC102724428A0A0B4J2F2 783 aa19.72■□□□□ 0.75
HDLBP-247ENST00000498595 SIK1P57059 783 aa19.72■□□□□ 0.75
HDLBP-247ENST00000498595 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
HDLBP-247ENST00000498595 TOGARAM1Q9Y4F4 1720 aa19.72■□□□□ 0.75
HDLBP-247ENST00000498595 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
HDLBP-247ENST00000498595 KIF7Q2M1P5 1343 aa19.71■□□□□ 0.75
HDLBP-247ENST00000498595 C1orf141Q5JVX7 400 aa19.7■□□□□ 0.74
HDLBP-247ENST00000498595 MSL1Q68DK7 614 aa19.7■□□□□ 0.74
HDLBP-247ENST00000498595 ZNF530Q6P9A1 599 aaPredicted RBP19.7■□□□□ 0.74
HDLBP-247ENST00000498595 DCAF5Q96JK2 942 aa19.7■□□□□ 0.74
HDLBP-247ENST00000498595 TUBGCP6Q96RT7 1819 aa19.69■□□□□ 0.74
HDLBP-247ENST00000498595 ERVV-2B6SEH9 535 aa19.69■□□□□ 0.74
HDLBP-247ENST00000498595 PHF14O94880 888 aa19.69■□□□□ 0.74
HDLBP-247ENST00000498595 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
HDLBP-247ENST00000498595 ITGB4P16144 1822 aa19.68■□□□□ 0.74
HDLBP-247ENST00000498595 ATP6V1AP38606 617 aa19.68■□□□□ 0.74
HDLBP-247ENST00000498595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.67■□□□□ 0.74
HDLBP-247ENST00000498595 AMER1Q5JTC6 1135 aaPredicted RBP19.67■□□□□ 0.74
HDLBP-247ENST00000498595 SULT6B1Q6IMI4 303 aa19.67■□□□□ 0.74
HDLBP-247ENST00000498595 C4BP0C0L5 1744 aa19.67■□□□□ 0.74
HDLBP-247ENST00000498595 SSFA2P28290 1259 aa19.66■□□□□ 0.74
HDLBP-247ENST00000498595 MTHFSP49914 203 aa19.66■□□□□ 0.74
HDLBP-247ENST00000498595 CABP4P57796 275 aa19.66■□□□□ 0.74
HDLBP-247ENST00000498595 ATG3Q9NT62 314 aa19.66■□□□□ 0.74
HDLBP-247ENST00000498595 GNPATO15228 680 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms