RNA–Protein interactions for RNA: ENST00000498574.1

IGKV1-39-201, Transcript of immunoglobulin kappa variable 1-39 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV1-39, Length 398 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39-201ENST00000498574 ITSN1Q15811 1721 aa11.85□□□□□ -0.51
IGKV1-39-201ENST00000498574 TRPM1Q7Z4N2 1603 aa11.85□□□□□ -0.51
IGKV1-39-201ENST00000498574 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
IGKV1-39-201ENST00000498574 ABCC6O95255 1503 aa11.85□□□□□ -0.51
IGKV1-39-201ENST00000498574 CPSF1Q10570 1443 aaKnown RBP11.85□□□□□ -0.51
IGKV1-39-201ENST00000498574 TUBGCP6Q96RT7 1819 aa11.84□□□□□ -0.51
IGKV1-39-201ENST00000498574 CCDC85CA6NKD9 419 aa11.84□□□□□ -0.51
IGKV1-39-201ENST00000498574 SOX12O15370 315 aa11.84□□□□□ -0.51
IGKV1-39-201ENST00000498574 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
IGKV1-39-201ENST00000498574 C10orf71Q711Q0 1435 aa11.84□□□□□ -0.51
IGKV1-39-201ENST00000498574 COL18A1P39060 1754 aa11.83□□□□□ -0.52
IGKV1-39-201ENST00000498574 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
IGKV1-39-201ENST00000498574 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
IGKV1-39-201ENST00000498574 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
IGKV1-39-201ENST00000498574 SLIT3O75094 1523 aa11.82□□□□□ -0.52
IGKV1-39-201ENST00000498574 ADGRB1O14514 1584 aa11.82□□□□□ -0.52
IGKV1-39-201ENST00000498574 FCHSD2O94868 740 aa11.81□□□□□ -0.52
IGKV1-39-201ENST00000498574 LBX1P52954 281 aa11.81□□□□□ -0.52
IGKV1-39-201ENST00000498574 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
IGKV1-39-201ENST00000498574 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
IGKV1-39-201ENST00000498574 TGFB2P61812 414 aa11.8□□□□□ -0.52
IGKV1-39-201ENST00000498574 ANKRD36BQ8N2N9 1353 aa11.79□□□□□ -0.52
IGKV1-39-201ENST00000498574 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
IGKV1-39-201ENST00000498574 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
IGKV1-39-201ENST00000498574 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
IGKV1-39-201ENST00000498574 VEGFAP15692 232 aaPredicted RBP11.78□□□□□ -0.52
IGKV1-39-201ENST00000498574 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
IGKV1-39-201ENST00000498574 ERBB3P21860 1342 aa11.78□□□□□ -0.52
IGKV1-39-201ENST00000498574 USP47Q96K76 1375 aa11.78□□□□□ -0.52
IGKV1-39-201ENST00000498574 PHF14O94880 888 aa11.77□□□□□ -0.53
IGKV1-39-201ENST00000498574 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.53
IGKV1-39-201ENST00000498574 AK7Q96M32 723 aa11.76□□□□□ -0.53
IGKV1-39-201ENST00000498574 MPHOSPH9Q99550 1183 aa11.76□□□□□ -0.53
IGKV1-39-201ENST00000498574 CABP1Q9NZU7 370 aa11.76□□□□□ -0.53
IGKV1-39-201ENST00000498574 NSD2O96028 1365 aa11.76□□□□□ -0.53
IGKV1-39-201ENST00000498574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
IGKV1-39-201ENST00000498574 DPEP1P16444 411 aa11.75□□□□□ -0.53
IGKV1-39-201ENST00000498574 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
IGKV1-39-201ENST00000498574 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
IGKV1-39-201ENST00000498574 PDE4DIPQ5VU43 2346 aa11.75□□□□□ -0.53
IGKV1-39-201ENST00000498574 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
IGKV1-39-201ENST00000498574 MMP10P09238 476 aa11.74□□□□□ -0.53
IGKV1-39-201ENST00000498574 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
IGKV1-39-201ENST00000498574 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
IGKV1-39-201ENST00000498574 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
IGKV1-39-201ENST00000498574 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
IGKV1-39-201ENST00000498574 LY75O60449 1722 aa11.73□□□□□ -0.53
IGKV1-39-201ENST00000498574 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
IGKV1-39-201ENST00000498574 RGPD5Q99666 1765 aa11.73□□□□□ -0.53
IGKV1-39-201ENST00000498574 CNTNAP1P78357 1384 aa11.72□□□□□ -0.53
IGKV1-39-201ENST00000498574 HSPA8P11142 646 aaKnown RBP11.72□□□□□ -0.53
IGKV1-39-201ENST00000498574 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
IGKV1-39-201ENST00000498574 SSFA2P28290 1259 aa11.71□□□□□ -0.53
IGKV1-39-201ENST00000498574 TTC21BQ7Z4L5 1316 aa11.7□□□□□ -0.54
IGKV1-39-201ENST00000498574 VEGFBP49765 207 aa11.7□□□□□ -0.54
IGKV1-39-201ENST00000498574 DALRD3Q5D0E6 543 aaKnown RBP11.7□□□□□ -0.54
IGKV1-39-201ENST00000498574 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
IGKV1-39-201ENST00000498574 PIM2Q9P1W9 311 aa11.7□□□□□ -0.54
IGKV1-39-201ENST00000498574 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
IGKV1-39-201ENST00000498574 TNRC6CQ9HCJ0 1690 aaKnown RBP11.69□□□□□ -0.54
IGKV1-39-201ENST00000498574 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
IGKV1-39-201ENST00000498574 KCNA3P22001 575 aa11.69□□□□□ -0.54
IGKV1-39-201ENST00000498574 ZCRB1Q8TBF4 217 aaKnown RBP11.69□□□□□ -0.54
IGKV1-39-201ENST00000498574 DCAF11Q8TEB1 546 aa11.69□□□□□ -0.54
IGKV1-39-201ENST00000498574 CCDC87Q9NVE4 849 aa11.68□□□□□ -0.54
IGKV1-39-201ENST00000498574 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
IGKV1-39-201ENST00000498574 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
IGKV1-39-201ENST00000498574 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
IGKV1-39-201ENST00000498574 NFAT5O94916 1531 aa11.66□□□□□ -0.54
IGKV1-39-201ENST00000498574 TTC21AQ8NDW8 1320 aa11.66□□□□□ -0.54
IGKV1-39-201ENST00000498574 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
IGKV1-39-201ENST00000498574 MAP2K1Q02750 393 aaPredicted RBP11.66□□□□□ -0.54
IGKV1-39-201ENST00000498574 PPARGC1BQ86YN6 1023 aaKnown RBP11.66□□□□□ -0.54
IGKV1-39-201ENST00000498574 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
IGKV1-39-201ENST00000498574 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
IGKV1-39-201ENST00000498574 POTECB2RU33 542 aa11.65□□□□□ -0.54
IGKV1-39-201ENST00000498574 PKD1L3Q7Z443 1732 aa11.65□□□□□ -0.54
IGKV1-39-201ENST00000498574 C5P01031 1676 aa11.65□□□□□ -0.55
IGKV1-39-201ENST00000498574 GNPATO15228 680 aa11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 LMNB1P20700 586 aa11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 TMF1P82094 1093 aa11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 MPRIPQ6WCQ1 1025 aa11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 LTV1Q96GA3 475 aaPredicted RBP11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
IGKV1-39-201ENST00000498574 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
IGKV1-39-201ENST00000498574 TNRC18O15417 2968 aaPredicted RBP11.63□□□□□ -0.55
IGKV1-39-201ENST00000498574 RASSF7Q02833 373 aa11.63□□□□□ -0.55
IGKV1-39-201ENST00000498574 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
IGKV1-39-201ENST00000498574 PARP3Q9Y6F1 533 aa11.63□□□□□ -0.55
IGKV1-39-201ENST00000498574 TMEM88BA6NKF7 163 aa11.62□□□□□ -0.55
IGKV1-39-201ENST00000498574 C4BP0C0L5 1744 aa11.62□□□□□ -0.55
IGKV1-39-201ENST00000498574 KIAA1551Q9HCM1 1747 aa11.62□□□□□ -0.55
IGKV1-39-201ENST00000498574 QRICH2Q9H0J4 1663 aa11.62□□□□□ -0.55
IGKV1-39-201ENST00000498574 LINC00116Q8NCU8 138 aa11.61□□□□□ -0.55
IGKV1-39-201ENST00000498574 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
IGKV1-39-201ENST00000498574 MCOLN1Q9GZU1 580 aa11.61□□□□□ -0.55
IGKV1-39-201ENST00000498574 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
IGKV1-39-201ENST00000498574 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms