RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 SYT17Q9BSW7 474 aa16.82■□□□□ 0.28
CNOT4-211ENST00000498534 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
CNOT4-211ENST00000498534 PRIM1P49642 420 aaKnown RBP16.81■□□□□ 0.28
CNOT4-211ENST00000498534 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
CNOT4-211ENST00000498534 LRRC4BQ9NT99 713 aa16.81■□□□□ 0.28
CNOT4-211ENST00000498534 FYB1O15117 783 aa16.8■□□□□ 0.28
CNOT4-211ENST00000498534 ARXQ96QS3 562 aa16.8■□□□□ 0.28
CNOT4-211ENST00000498534 BTAF1O14981 1849 aa16.8■□□□□ 0.28
CNOT4-211ENST00000498534 SLC16A10Q8TF71 515 aa16.79■□□□□ 0.28
CNOT4-211ENST00000498534 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
CNOT4-211ENST00000498534 FAM208AQ9UK61 1670 aaKnown RBP16.78■□□□□ 0.28
CNOT4-211ENST00000498534 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
CNOT4-211ENST00000498534 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
CNOT4-211ENST00000498534 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
CNOT4-211ENST00000498534 SGIP1Q9BQI5 828 aa16.78■□□□□ 0.28
CNOT4-211ENST00000498534 CGNL1Q0VF96 1302 aa16.77■□□□□ 0.28
CNOT4-211ENST00000498534 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
CNOT4-211ENST00000498534 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
CNOT4-211ENST00000498534 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
CNOT4-211ENST00000498534 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.28
CNOT4-211ENST00000498534 USP47Q96K76 1375 aa16.77■□□□□ 0.27
CNOT4-211ENST00000498534 MYOM1P52179 1685 aa16.76■□□□□ 0.27
CNOT4-211ENST00000498534 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
CNOT4-211ENST00000498534 TATP17735 454 aaPredicted RBP16.75■□□□□ 0.27
CNOT4-211ENST00000498534 POLD1P28340 1107 aa16.75■□□□□ 0.27
CNOT4-211ENST00000498534 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
CNOT4-211ENST00000498534 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
CNOT4-211ENST00000498534 KCNQ4P56696 695 aa16.73■□□□□ 0.27
CNOT4-211ENST00000498534 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
CNOT4-211ENST00000498534 CCNL1Q9UK58 526 aaPredicted RBP16.73■□□□□ 0.27
CNOT4-211ENST00000498534 PAPPAQ13219 1627 aa16.72■□□□□ 0.27
CNOT4-211ENST00000498534 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
CNOT4-211ENST00000498534 KLHL34Q8N239 644 aa16.71■□□□□ 0.27
CNOT4-211ENST00000498534 TIMELESSQ9UNS1 1208 aa16.71■□□□□ 0.27
CNOT4-211ENST00000498534 INSRP06213 1382 aa16.71■□□□□ 0.27
CNOT4-211ENST00000498534 RGPD2P0DJD1 1756 aa16.71■□□□□ 0.27
CNOT4-211ENST00000498534 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
CNOT4-211ENST00000498534 MEGF6O75095 1541 aa16.7■□□□□ 0.26
CNOT4-211ENST00000498534 KIF24Q5T7B8 1368 aa16.7■□□□□ 0.26
CNOT4-211ENST00000498534 MAP3K5Q99683 1374 aa16.7■□□□□ 0.26
CNOT4-211ENST00000498534 GPR162Q16538 588 aa16.7■□□□□ 0.26
CNOT4-211ENST00000498534 FLT4P35916 1363 aa16.69■□□□□ 0.26
CNOT4-211ENST00000498534 CARD14Q9BXL6 1004 aa16.69■□□□□ 0.26
CNOT4-211ENST00000498534 UTRNP46939 3433 aa16.69■□□□□ 0.26
CNOT4-211ENST00000498534 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
CNOT4-211ENST00000498534 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
CNOT4-211ENST00000498534 NSD2O96028 1365 aa16.68■□□□□ 0.26
CNOT4-211ENST00000498534 PPM1GO15355 546 aaPredicted RBP16.68■□□□□ 0.26
CNOT4-211ENST00000498534 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
CNOT4-211ENST00000498534 ZNF784Q8NCA9 323 aaPredicted RBP16.67■□□□□ 0.26
CNOT4-211ENST00000498534 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
CNOT4-211ENST00000498534 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
CNOT4-211ENST00000498534 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
CNOT4-211ENST00000498534 EMILIN1Q9Y6C2 1016 aa16.65■□□□□ 0.26
CNOT4-211ENST00000498534 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
CNOT4-211ENST00000498534 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
CNOT4-211ENST00000498534 SMARCC1Q92922 1105 aaPredicted RBP16.64■□□□□ 0.25
CNOT4-211ENST00000498534 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
CNOT4-211ENST00000498534 LY75O60449 1722 aa16.64■□□□□ 0.25
CNOT4-211ENST00000498534 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
CNOT4-211ENST00000498534 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
CNOT4-211ENST00000498534 CHD4Q14839 1912 aa16.63■□□□□ 0.25
CNOT4-211ENST00000498534 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
CNOT4-211ENST00000498534 CYP27B1O15528 508 aa16.63■□□□□ 0.25
CNOT4-211ENST00000498534 POLR3GLQ9BT43 218 aa16.62■□□□□ 0.25
CNOT4-211ENST00000498534 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
CNOT4-211ENST00000498534 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
CNOT4-211ENST00000498534 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
CNOT4-211ENST00000498534 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
CNOT4-211ENST00000498534 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
CNOT4-211ENST00000498534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.6■□□□□ 0.25
CNOT4-211ENST00000498534 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
CNOT4-211ENST00000498534 NLGN2Q8NFZ4 835 aa16.59■□□□□ 0.25
CNOT4-211ENST00000498534 PIGBQ92521 554 aa16.59■□□□□ 0.25
CNOT4-211ENST00000498534 AK7Q96M32 723 aa16.59■□□□□ 0.25
CNOT4-211ENST00000498534 MSL1Q68DK7 614 aa16.58■□□□□ 0.24
CNOT4-211ENST00000498534 EYA1Q99502 592 aa16.58■□□□□ 0.24
CNOT4-211ENST00000498534 POLKQ9UBT6 870 aa16.58■□□□□ 0.24
CNOT4-211ENST00000498534 COL24A1Q17RW2 1714 aa16.58■□□□□ 0.24
CNOT4-211ENST00000498534 TUBGCP6Q96RT7 1819 aa16.58■□□□□ 0.24
CNOT4-211ENST00000498534 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
CNOT4-211ENST00000498534 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
CNOT4-211ENST00000498534 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
CNOT4-211ENST00000498534 CD2APQ9Y5K6 639 aa16.56■□□□□ 0.24
CNOT4-211ENST00000498534 MAP2P11137 1827 aaKnown RBP16.55■□□□□ 0.24
CNOT4-211ENST00000498534 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
CNOT4-211ENST00000498534 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
CNOT4-211ENST00000498534 GOLGB1Q14789 3259 aaKnown RBP16.55■□□□□ 0.24
CNOT4-211ENST00000498534 C5P01031 1676 aa16.54■□□□□ 0.24
CNOT4-211ENST00000498534 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
CNOT4-211ENST00000498534 CAPN15O75808 1086 aa16.54■□□□□ 0.24
CNOT4-211ENST00000498534 SIK1P57059 783 aa16.54■□□□□ 0.24
CNOT4-211ENST00000498534 C1QTNF8P60827 252 aa16.54■□□□□ 0.24
CNOT4-211ENST00000498534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
CNOT4-211ENST00000498534 PHF14O94880 888 aa16.53■□□□□ 0.24
CNOT4-211ENST00000498534 PHKG2P15735 406 aa16.53■□□□□ 0.24
CNOT4-211ENST00000498534 ITGB4P16144 1822 aa16.53■□□□□ 0.24
CNOT4-211ENST00000498534 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
CNOT4-211ENST00000498534 YBX3P16989 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
CNOT4-211ENST00000498534 ATP6V1AP38606 617 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms