RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 SULT6B1Q6IMI4 303 aa21.41■■□□□ 1.02
SSBP1-214ENST00000498107 FAM196AQ6ZSG2 479 aa21.41■■□□□ 1.02
SSBP1-214ENST00000498107 KDRP35968 1356 aa21.4■■□□□ 1.02
SSBP1-214ENST00000498107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.4■■□□□ 1.022e-7■■□□□ 12.8
SSBP1-214ENST00000498107 SPG7Q9UQ90 795 aa21.4■■□□□ 1.02
SSBP1-214ENST00000498107 PCDH11XQ9BZA7 1347 aa21.37■■□□□ 1.01
SSBP1-214ENST00000498107 PCDH11YQ9BZA8 1340 aa21.37■■□□□ 1.01
SSBP1-214ENST00000498107 AMOTQ4VCS5 1084 aa21.37■■□□□ 1.01
SSBP1-214ENST00000498107 MARCH10Q8NA82 808 aaPredicted RBP21.37■■□□□ 1.01
SSBP1-214ENST00000498107 PLEKHO1Q53GL0 409 aaPredicted RBP21.36■■□□□ 1.01
SSBP1-214ENST00000498107 CCDC125Q86Z20 511 aa21.36■■□□□ 1.01
SSBP1-214ENST00000498107 AEBP1Q8IUX7 1158 aa21.36■■□□□ 1.01
SSBP1-214ENST00000498107 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
SSBP1-214ENST00000498107 BCL9O00512 1426 aa21.36■■□□□ 1.01
SSBP1-214ENST00000498107 PKD1L3Q7Z443 1732 aa21.35■■□□□ 1.01
SSBP1-214ENST00000498107 HMOX1P09601 288 aa21.35■■□□□ 1.01
SSBP1-214ENST00000498107 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
SSBP1-214ENST00000498107 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.011e-7■■■■■ 28.2
SSBP1-214ENST00000498107 FAM182BQ5T319 152 aa21.34■■□□□ 1.01
SSBP1-214ENST00000498107 FCHSD2O94868 740 aa21.32■■□□□ 1
SSBP1-214ENST00000498107 SF3B2Q13435 895 aaKnown RBP21.32■■□□□ 1
SSBP1-214ENST00000498107 IFNL2Q8IZJ0 200 aa21.31■■□□□ 1
SSBP1-214ENST00000498107 UPF1Q92900 1129 aaKnown RBP eCLIP21.31■■□□□ 1
SSBP1-214ENST00000498107 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
SSBP1-214ENST00000498107 SHANK3Q9BYB0 1731 aa21.31■■□□□ 1
SSBP1-214ENST00000498107 NEFMP07197 916 aa21.3■■□□□ 1
SSBP1-214ENST00000498107 CYP27B1O15528 508 aa21.28■■□□□ 1
SSBP1-214ENST00000498107 HSP90AB1P08238 724 aaKnown RBP21.28■■□□□ 1
SSBP1-214ENST00000498107 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
SSBP1-214ENST00000498107 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
SSBP1-214ENST00000498107 RSPH6AQ9H0K4 717 aa21.28■■□□□ 1
SSBP1-214ENST00000498107 KAT6BQ8WYB5 2073 aa21.27■■□□□ 1
SSBP1-214ENST00000498107 TRIM37O94972 964 aa21.27■■□□□ 1
SSBP1-214ENST00000498107 PHKG2P15735 406 aa21.27■■□□□ 1
SSBP1-214ENST00000498107 PRKAR2BP31323 418 aa21.27■■□□□ 1
SSBP1-214ENST00000498107 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
SSBP1-214ENST00000498107 SBF2Q86WG5 1849 aa21.27■□□□□ 0.99
SSBP1-214ENST00000498107 NKX1-1Q15270 411 aaPredicted RBP21.26■□□□□ 0.99
SSBP1-214ENST00000498107 BCL11BQ9C0K0 894 aaPredicted RBP21.26■□□□□ 0.99
SSBP1-214ENST00000498107 GAS2L2Q8NHY3 880 aa21.25■□□□□ 0.99
SSBP1-214ENST00000498107 EP400Q96L91 3159 aa21.25■□□□□ 0.99
SSBP1-214ENST00000498107 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
SSBP1-214ENST00000498107 BAG6P46379 1132 aa21.23■□□□□ 0.99
SSBP1-214ENST00000498107 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
SSBP1-214ENST00000498107 NHSQ6T4R5 1651 aa21.22■□□□□ 0.99
SSBP1-214ENST00000498107 MTHFSDQ2M296 383 aaKnown RBP21.22■□□□□ 0.99
SSBP1-214ENST00000498107 ACSBG1Q96GR2 724 aa21.22■□□□□ 0.99
SSBP1-214ENST00000498107 DCAF5Q96JK2 942 aa21.22■□□□□ 0.99
SSBP1-214ENST00000498107 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
SSBP1-214ENST00000498107 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
SSBP1-214ENST00000498107 APBA3O96018 575 aa21.2■□□□□ 0.98
SSBP1-214ENST00000498107 SYTL4Q96C24 671 aaPredicted RBP21.2■□□□□ 0.98
SSBP1-214ENST00000498107 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
SSBP1-214ENST00000498107 TNS1Q9HBL0 1735 aaKnown RBP21.2■□□□□ 0.98
SSBP1-214ENST00000498107 PRIM1P49642 420 aaKnown RBP21.19■□□□□ 0.98
SSBP1-214ENST00000498107 PHACTR3Q96KR7 559 aa21.19■□□□□ 0.98
SSBP1-214ENST00000498107 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
SSBP1-214ENST00000498107 KCNQ2O43526 872 aa21.18■□□□□ 0.98
SSBP1-214ENST00000498107 GNAT3A8MTJ3 354 aa21.17■□□□□ 0.98
SSBP1-214ENST00000498107 PLEKHF1Q96S99 279 aa21.17■□□□□ 0.98
SSBP1-214ENST00000498107 ADAMTS8Q9UP79 889 aa21.17■□□□□ 0.98
SSBP1-214ENST00000498107 MAP3K5Q99683 1374 aa21.16■□□□□ 0.98
SSBP1-214ENST00000498107 PLSCR1O15162 318 aa21.15■□□□□ 0.98
SSBP1-214ENST00000498107 CCDC184Q52MB2 194 aa21.15■□□□□ 0.98
SSBP1-214ENST00000498107 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
SSBP1-214ENST00000498107 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
SSBP1-214ENST00000498107 BTAF1O14981 1849 aa21.14■□□□□ 0.97
SSBP1-214ENST00000498107 RUNDC1Q96C34 613 aa21.14■□□□□ 0.97
SSBP1-214ENST00000498107 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
SSBP1-214ENST00000498107 ITGB4P16144 1822 aa21.13■□□□□ 0.97
SSBP1-214ENST00000498107 TOGARAM1Q9Y4F4 1720 aa21.13■□□□□ 0.97
SSBP1-214ENST00000498107 HTATSF1O43719 755 aaKnown RBP21.13■□□□□ 0.97
SSBP1-214ENST00000498107 CABP4P57796 275 aa21.13■□□□□ 0.97
SSBP1-214ENST00000498107 PTF1AQ7RTS3 328 aa21.13■□□□□ 0.97
SSBP1-214ENST00000498107 PNISRQ8TF01 805 aaKnown RBP21.13■□□□□ 0.97
SSBP1-214ENST00000498107 RTF1Q92541 710 aaKnown RBP21.13■□□□□ 0.97
SSBP1-214ENST00000498107 RGPD3A6NKT7 1758 aaPredicted RBP21.13■□□□□ 0.97
SSBP1-214ENST00000498107 RGPD4Q7Z3J3 1758 aa21.13■□□□□ 0.97
SSBP1-214ENST00000498107 SCN11AQ9UI33 1791 aa21.13■□□□□ 0.97
SSBP1-214ENST00000498107 CCER2I3L3R5 266 aa21.12■□□□□ 0.97
SSBP1-214ENST00000498107 RNMTO43148 476 aaKnown RBP21.12■□□□□ 0.97
SSBP1-214ENST00000498107 EN1Q05925 392 aaPredicted RBP21.12■□□□□ 0.97
SSBP1-214ENST00000498107 NFE2L2Q16236 605 aa21.12■□□□□ 0.97
SSBP1-214ENST00000498107 DEFB132Q7Z7B7 95 aa21.12■□□□□ 0.97
SSBP1-214ENST00000498107 SMARCC1Q92922 1105 aaPredicted RBP21.11■□□□□ 0.97
SSBP1-214ENST00000498107 PIGBQ92521 554 aa21.1■□□□□ 0.97
SSBP1-214ENST00000498107 CAMKK2Q96RR4 588 aa21.1■□□□□ 0.97
SSBP1-214ENST00000498107 HMGB2P26583 209 aaKnown RBP21.09■□□□□ 0.97
SSBP1-214ENST00000498107 CCDC146Q8IYE0 955 aa21.09■□□□□ 0.97
SSBP1-214ENST00000498107 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
SSBP1-214ENST00000498107 VIRMAQ69YN4 1812 aaKnown RBP21.08■□□□□ 0.97
SSBP1-214ENST00000498107 LMOD3Q0VAK6 560 aa21.08■□□□□ 0.97
SSBP1-214ENST00000498107 TEFQ10587 303 aa21.08■□□□□ 0.97
SSBP1-214ENST00000498107 SLC52A2Q9HAB3 445 aa21.08■□□□□ 0.97
SSBP1-214ENST00000498107 LGR6Q9HBX8 967 aa21.08■□□□□ 0.97
SSBP1-214ENST00000498107 EZH2Q15910 746 aaKnown RBP21.07■□□□□ 0.96
SSBP1-214ENST00000498107 NFATC2IPQ8NCF5 419 aa21.07■□□□□ 0.96
SSBP1-214ENST00000498107 MRC1P22897 1456 aa21.07■□□□□ 0.96
SSBP1-214ENST00000498107 TMPOP42166 694 aaKnown RBP21.06■□□□□ 0.96
SSBP1-214ENST00000498107 IL17REQ8NFR9 667 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms