RNA–Protein interactions for RNA: ENST00000498091.1

RTN4IP1-203, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2

Gene RTN4IP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-203ENST00000498091 BMP2P12643 396 aa5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 VARSP26640 1264 aaKnown RBP5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 GPAT2Q6NUI2 795 aa5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 SYMPKQ92797 1274 aaKnown RBP5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 HLA-CQ95604 372 aa5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 FAM217BQ9NTX9 383 aaPredicted RBP5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 COG6Q9Y2V7 657 aa5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 UHRF1BP1LA0JNW5 1464 aa5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 MTUS2Q5JR59 1369 aa5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 CCNB3Q8WWL7 1395 aa5.55□□□□□ -1.52
RTN4IP1-203ENST00000498091 ABCC2Q92887 1545 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 NCOA2Q15596 1464 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 PLB1Q6P1J6 1458 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 CLK2P49760 499 aaKnown RBP5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 GUCA2AQ02747 115 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 AGERQ15109 404 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 KANK4Q5T7N3 995 aaPredicted RBP5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 MYSM1Q5VVJ2 828 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 PTCRAQ6ISU1 281 aaPredicted RBP5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 AEBP1Q8IUX7 1158 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 FAM174AQ8TBP5 190 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 ZNF330Q9Y3S2 320 aaPredicted RBP5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 PTPRGP23470 1445 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 MYOM3Q5VTT5 1437 aa5.54□□□□□ -1.52
RTN4IP1-203ENST00000498091 CDK13Q14004 1512 aaKnown RBP5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 MAGI3Q5TCQ9 1506 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 ITSN2Q9NZM3 1697 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 VSIG8P0DPA2 414 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 MARSP56192 900 aaKnown RBP5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 SVOPQ8N4V2 548 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 BAP1Q92560 729 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 SNRKQ9NRH2 765 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 CDK11AQ9UQ88 783 aaPredicted RBP5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 TROQ12816 1431 aaPredicted RBP5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 FGD6Q6ZV73 1430 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 MIA2Q96PC5 1412 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 UACAQ9BZF9 1416 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 PHLDB1Q86UU1 1377 aa5.53□□□□□ -1.52
RTN4IP1-203ENST00000498091 CTHP32929 405 aa5.52□□□□□ -1.53
RTN4IP1-203ENST00000498091 RFC5P40937 340 aa5.52□□□□□ -1.53
RTN4IP1-203ENST00000498091 BANK1Q8NDB2 785 aa5.52□□□□□ -1.53
RTN4IP1-203ENST00000498091 CNTNAP3BQ96NU0 1288 aa5.52□□□□□ -1.53
RTN4IP1-203ENST00000498091 CNTNAP3Q9BZ76 1288 aa5.52□□□□□ -1.53
RTN4IP1-203ENST00000498091 KIF14Q15058 1648 aa5.52□□□□□ -1.53
RTN4IP1-203ENST00000498091 TCOF1Q13428 1488 aaKnown RBP5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 ERCC6L2Q5T890 1561 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 PPFIA3O75145 1194 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 ZIC2O95409 532 aaPredicted RBP5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 IGHA1P01876 353 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 FDX1P10109 184 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 TIMP2P16035 220 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 DIXDC1Q155Q3 683 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 PPARGC1BQ86YN6 1023 aaKnown RBP5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 ZNF511Q8NB15 262 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 TBC1D2Q9BYX2 928 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 ADAMTS8Q9UP79 889 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 KDM5BQ9UGL1 1544 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 ATP10BO94823 1461 aa5.51□□□□□ -1.53
RTN4IP1-203ENST00000498091 PTPN23Q9H3S7 1636 aa5.5□□□□□ -1.53
RTN4IP1-203ENST00000498091 IRS1P35568 1242 aa5.5□□□□□ -1.53
RTN4IP1-203ENST00000498091 PTPRNQ16849 979 aa5.5□□□□□ -1.53
RTN4IP1-203ENST00000498091 TMEM259Q4ZIN3 620 aa5.5□□□□□ -1.53
RTN4IP1-203ENST00000498091 RETREG2Q8NC44 543 aa5.5□□□□□ -1.53
RTN4IP1-203ENST00000498091 AKNAQ7Z591 1439 aa5.49□□□□□ -1.53
RTN4IP1-203ENST00000498091 SPTLC1O15269 473 aa5.49□□□□□ -1.53
RTN4IP1-203ENST00000498091 HMGB1P09429 215 aaKnown RBP5.49□□□□□ -1.53
RTN4IP1-203ENST00000498091 KCNH2Q12809 1159 aa5.49□□□□□ -1.53
RTN4IP1-203ENST00000498091 WWC1Q8IX03 1113 aa5.49□□□□□ -1.53
RTN4IP1-203ENST00000498091 DNMT3AQ9Y6K1 912 aaPredicted RBP5.49□□□□□ -1.53
RTN4IP1-203ENST00000498091 ARAP3Q8WWN8 1544 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 ZCCHC11Q5TAX3 1644 aaKnown RBP5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 ABCC10Q5T3U5 1492 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 FOXK2Q01167 660 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 FBXO31Q5XUX0 539 aaPredicted RBP5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 LINC00528Q8N1L1 170 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 MPNDQ8N594 471 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 GDPD2Q9HCC8 539 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 EVA1BQ9NVM1 165 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 LIMD1Q9UGP4 676 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 PREX2Q70Z35 1606 aa5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 ACIN1Q9UKV3 1341 aaKnown RBP5.48□□□□□ -1.53
RTN4IP1-203ENST00000498091 ZEB1P37275 1124 aaPredicted RBP5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 MAP3K10Q02779 954 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 NR5A1Q13285 461 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 PPP2R2DQ66LE6 453 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 KANK3Q6NY19 840 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 RIC3Q7Z5B4 369 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 SCARF2Q96GP6 870 aaPredicted RBP5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 CALR3Q96L12 384 aaKnown RBP5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 ZFAND3Q9H8U3 227 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 PRM3Q9NNZ6 103 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 CDC42BPAQ5VT25 1732 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 DNMT1P26358 1616 aaKnown RBP5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 HFM1A2PYH4 1435 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 CROCC2H7BZ55 1655 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 GCC2Q8IWJ2 1684 aa5.47□□□□□ -1.53
RTN4IP1-203ENST00000498091 SHANK2Q9UPX8 1470 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms