RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 TNMDQ9H2S6 317 aa13.32□□□□□ -0.28
LRRC55-201ENST00000497933 LUC7LQ9NQ29 371 aaKnown RBP13.32□□□□□ -0.28
LRRC55-201ENST00000497933 DYNC1I1O14576 645 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 TXLNAP40222 546 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 KRT85P78386 507 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 SYCE3A1L190 88 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 RPAP2Q8IXW5 612 aaPredicted RBP13.31□□□□□ -0.28
LRRC55-201ENST00000497933 FMNL2Q96PY5 1086 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
LRRC55-201ENST00000497933 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
LRRC55-201ENST00000497933 SERPINC1P01008 464 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 CALCOCO1Q9P1Z2 691 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 PPFIBP1Q86W92 1011 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 RRS1Q15050 365 aaKnown RBP13.3□□□□□ -0.28
LRRC55-201ENST00000497933 GRIN2AQ12879 1464 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 MCM5P33992 734 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
LRRC55-201ENST00000497933 ZRSR2Q15696 482 aaKnown RBP13.3□□□□□ -0.28
LRRC55-201ENST00000497933 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
LRRC55-201ENST00000497933 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
LRRC55-201ENST00000497933 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
LRRC55-201ENST00000497933 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
LRRC55-201ENST00000497933 KIF2AO00139 706 aaPredicted RBP13.29□□□□□ -0.28
LRRC55-201ENST00000497933 IKQ13123 557 aaPredicted RBP13.28□□□□□ -0.28
LRRC55-201ENST00000497933 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 ABCC5O15440 1437 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 KIF14Q15058 1648 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
LRRC55-201ENST00000497933 PLB1Q6P1J6 1458 aa13.27□□□□□ -0.28
LRRC55-201ENST00000497933 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.28
LRRC55-201ENST00000497933 CHD1LQ86WJ1 897 aa13.27□□□□□ -0.28
LRRC55-201ENST00000497933 SF3B2Q13435 895 aaKnown RBP13.27□□□□□ -0.29
LRRC55-201ENST00000497933 ZSCAN31Q96LW9 406 aaPredicted RBP13.27□□□□□ -0.29
LRRC55-201ENST00000497933 SRGAP3O43295 1099 aa13.27□□□□□ -0.29
LRRC55-201ENST00000497933 CEP57L1Q8IYX8 460 aa13.27□□□□□ -0.29
LRRC55-201ENST00000497933 ZFYVE27Q5T4F4 411 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
LRRC55-201ENST00000497933 TNPO1Q92973 898 aaKnown RBP13.26□□□□□ -0.29
LRRC55-201ENST00000497933 MYL6BP14649 208 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 PHF23Q9BUL5 403 aaPredicted RBP13.26□□□□□ -0.29
LRRC55-201ENST00000497933 AMOTQ4VCS5 1084 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
LRRC55-201ENST00000497933 NUTM2BA6NNL0 878 aaPredicted RBP13.26□□□□□ -0.29
LRRC55-201ENST00000497933 NUTM2EB1AL46 878 aaPredicted RBP13.26□□□□□ -0.29
LRRC55-201ENST00000497933 STARD3NLO95772 234 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 STIM1Q13586 685 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 NUTM2AQ8IVF1 878 aaPredicted RBP13.26□□□□□ -0.29
LRRC55-201ENST00000497933 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
LRRC55-201ENST00000497933 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
LRRC55-201ENST00000497933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.29
LRRC55-201ENST00000497933 SKIDA1Q1XH10 827 aa13.25□□□□□ -0.29
LRRC55-201ENST00000497933 GBP3Q9H0R5 595 aa13.25□□□□□ -0.29
LRRC55-201ENST00000497933 NUP62CLQ9H1M0 184 aa13.25□□□□□ -0.29
LRRC55-201ENST00000497933 CFAP45Q9UL16 551 aa13.25□□□□□ -0.29
LRRC55-201ENST00000497933 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
LRRC55-201ENST00000497933 SIL1Q9H173 461 aa13.25□□□□□ -0.29
LRRC55-201ENST00000497933 XRCC6P12956 609 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRRC55-201ENST00000497933 ME1P48163 572 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
LRRC55-201ENST00000497933 TMCO3Q6UWJ1 677 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
LRRC55-201ENST00000497933 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
LRRC55-201ENST00000497933 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 SMTNL1A8MU46 457 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 KRT32Q14532 448 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 AACSQ86V21 672 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 UBXN4Q92575 508 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
LRRC55-201ENST00000497933 SYCP1Q15431 976 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 WAPLQ7Z5K2 1190 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 PRIMPOLQ96LW4 560 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 SPATA32Q96LK8 384 aa13.23□□□□□ -0.29
LRRC55-201ENST00000497933 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 ATP2B1P20020 1258 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
LRRC55-201ENST00000497933 PLCD4Q9BRC7 762 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 WASLO00401 505 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms