RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 IP6K1Q92551 441 aa15.44■□□□□ 0.06
ERCC8-208ENST00000497892 USP35Q9P2H5 1018 aa15.44■□□□□ 0.06
ERCC8-208ENST00000497892 THRAP3Q9Y2W1 955 aaKnown RBP15.44■□□□□ 0.06
ERCC8-208ENST00000497892 KIF24Q5T7B8 1368 aa15.44■□□□□ 0.06
ERCC8-208ENST00000497892 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
ERCC8-208ENST00000497892 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
ERCC8-208ENST00000497892 MAP2P11137 1827 aaKnown RBP15.43■□□□□ 0.06
ERCC8-208ENST00000497892 A0A0G2JS52 829 aa15.42■□□□□ 0.06
ERCC8-208ENST00000497892 CSB-PGBD3P0DP91 1061 aa15.42■□□□□ 0.06
ERCC8-208ENST00000497892 HOXC9P31274 260 aa15.42■□□□□ 0.06
ERCC8-208ENST00000497892 MYT1Q01538 1121 aa15.42■□□□□ 0.06
ERCC8-208ENST00000497892 RRS1Q15050 365 aaKnown RBP15.42■□□□□ 0.06
ERCC8-208ENST00000497892 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
ERCC8-208ENST00000497892 KNSTRNQ9Y448 316 aa15.42■□□□□ 0.06
ERCC8-208ENST00000497892 FLT4P35916 1363 aa15.41■□□□□ 0.06
ERCC8-208ENST00000497892 PLCD3Q8N3E9 789 aa15.41■□□□□ 0.06
ERCC8-208ENST00000497892 ANKRD24Q8TF21 1146 aa15.41■□□□□ 0.06
ERCC8-208ENST00000497892 CARD10Q9BWT7 1032 aa15.41■□□□□ 0.06
ERCC8-208ENST00000497892 RGPD2P0DJD1 1756 aa15.41■□□□□ 0.06
ERCC8-208ENST00000497892 DISP2A7MBM2 1401 aa15.41■□□□□ 0.06
ERCC8-208ENST00000497892 PER1O15534 1290 aaPredicted RBP15.4■□□□□ 0.06
ERCC8-208ENST00000497892 AMPHP49418 695 aa15.4■□□□□ 0.06
ERCC8-208ENST00000497892 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
ERCC8-208ENST00000497892 KRT27Q7Z3Y8 459 aa15.4■□□□□ 0.06
ERCC8-208ENST00000497892 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
ERCC8-208ENST00000497892 INSRP06213 1382 aa15.39■□□□□ 0.05
ERCC8-208ENST00000497892 UPF1Q92900 1129 aaKnown RBP eCLIP15.38■□□□□ 0.05
ERCC8-208ENST00000497892 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
ERCC8-208ENST00000497892 NPC1L1Q9UHC9 1359 aa15.37■□□□□ 0.05
ERCC8-208ENST00000497892 CDCA7Q9BWT1 371 aaPredicted RBP15.37■□□□□ 0.05
ERCC8-208ENST00000497892 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
ERCC8-208ENST00000497892 HSP90AB2PQ58FF8 381 aa15.36■□□□□ 0.05
ERCC8-208ENST00000497892 LTV1Q96GA3 475 aaPredicted RBP15.36■□□□□ 0.05
ERCC8-208ENST00000497892 POLKQ9UBT6 870 aa15.36■□□□□ 0.05
ERCC8-208ENST00000497892 TNS2Q63HR2 1409 aa15.35■□□□□ 0.05
ERCC8-208ENST00000497892 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
ERCC8-208ENST00000497892 MORC1Q86VD1 984 aa15.35■□□□□ 0.05
ERCC8-208ENST00000497892 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
ERCC8-208ENST00000497892 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
ERCC8-208ENST00000497892 RASEFQ8IZ41 740 aa15.34■□□□□ 0.05
ERCC8-208ENST00000497892 TNS1Q9HBL0 1735 aaKnown RBP15.33■□□□□ 0.04
ERCC8-208ENST00000497892 NCAPD2Q15021 1401 aa15.33■□□□□ 0.04
ERCC8-208ENST00000497892 PPM1GO15355 546 aaPredicted RBP15.32■□□□□ 0.04
ERCC8-208ENST00000497892 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
ERCC8-208ENST00000497892 DDB1Q16531 1140 aa15.32■□□□□ 0.04
ERCC8-208ENST00000497892 OVOS2A0A0G2JMS6 1433 aa15.32■□□□□ 0.04
ERCC8-208ENST00000497892 SHANK3Q9BYB0 1731 aa15.31■□□□□ 0.04
ERCC8-208ENST00000497892 IL2RBP14784 551 aa15.31■□□□□ 0.04
ERCC8-208ENST00000497892 CC2D1BQ5T0F9 858 aaKnown RBP15.31■□□□□ 0.04
ERCC8-208ENST00000497892 FAM182BQ5T319 152 aa15.31■□□□□ 0.04
ERCC8-208ENST00000497892 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
ERCC8-208ENST00000497892 MEGF6O75095 1541 aa15.31■□□□□ 0.04
ERCC8-208ENST00000497892 NBPF6Q5VWK0 638 aa15.3■□□□□ 0.04
ERCC8-208ENST00000497892 SBF2Q86WG5 1849 aa15.3■□□□□ 0.04
ERCC8-208ENST00000497892 CCDC125Q86Z20 511 aa15.3■□□□□ 0.04
ERCC8-208ENST00000497892 NBPF4Q96M43 638 aa15.3■□□□□ 0.04
ERCC8-208ENST00000497892 FAM196AQ6ZSG2 479 aa15.29■□□□□ 0.04
ERCC8-208ENST00000497892 BCL9O00512 1426 aa15.28■□□□□ 0.04
ERCC8-208ENST00000497892 PKD1L3Q7Z443 1732 aa15.28■□□□□ 0.04
ERCC8-208ENST00000497892 EXOC5O00471 708 aa15.27■□□□□ 0.04
ERCC8-208ENST00000497892 EIF4A2Q14240 407 aaKnown RBP15.27■□□□□ 0.04
ERCC8-208ENST00000497892 USHBP1Q8N6Y0 703 aa15.27■□□□□ 0.04
ERCC8-208ENST00000497892 MARCH10Q8NA82 808 aaPredicted RBP15.27■□□□□ 0.04
ERCC8-208ENST00000497892 KIF12Q96FN5 646 aa15.27■□□□□ 0.04
ERCC8-208ENST00000497892 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
ERCC8-208ENST00000497892 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
ERCC8-208ENST00000497892 IGSF1Q8N6C5 1336 aa15.24■□□□□ 0.03
ERCC8-208ENST00000497892 NUBP1P53384 320 aa15.24■□□□□ 0.03
ERCC8-208ENST00000497892 RAPGEF4Q8WZA2 1011 aa15.24■□□□□ 0.03
ERCC8-208ENST00000497892 EYA1Q99502 592 aa15.24■□□□□ 0.03
ERCC8-208ENST00000497892 COL3A1P02461 1466 aaPredicted RBP15.24■□□□□ 0.03
ERCC8-208ENST00000497892 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
ERCC8-208ENST00000497892 MTHFSP49914 203 aa15.23■□□□□ 0.03
ERCC8-208ENST00000497892 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
ERCC8-208ENST00000497892 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
ERCC8-208ENST00000497892 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
ERCC8-208ENST00000497892 RGPD3A6NKT7 1758 aaPredicted RBP15.23■□□□□ 0.03
ERCC8-208ENST00000497892 RGPD4Q7Z3J3 1758 aa15.23■□□□□ 0.03
ERCC8-208ENST00000497892 TRIM37O94972 964 aa15.22■□□□□ 0.03
ERCC8-208ENST00000497892 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
ERCC8-208ENST00000497892 DOT1LQ8TEK3 1739 aa15.22■□□□□ 0.03
ERCC8-208ENST00000497892 PARD3Q8TEW0 1356 aa15.22■□□□□ 0.03
ERCC8-208ENST00000497892 TATP17735 454 aaPredicted RBP15.21■□□□□ 0.03
ERCC8-208ENST00000497892 ZCRB1Q8TBF4 217 aaKnown RBP15.21■□□□□ 0.03
ERCC8-208ENST00000497892 IL13P35225 146 aa15.2■□□□□ 0.02
ERCC8-208ENST00000497892 DDX10Q13206 875 aaKnown RBP15.2■□□□□ 0.02
ERCC8-208ENST00000497892 KDRP35968 1356 aa15.2■□□□□ 0.02
ERCC8-208ENST00000497892 RREB1Q92766 1687 aa15.19■□□□□ 0.02
ERCC8-208ENST00000497892 ATMINO43313 823 aaPredicted RBP15.19■□□□□ 0.02
ERCC8-208ENST00000497892 BAG6P46379 1132 aa15.19■□□□□ 0.02
ERCC8-208ENST00000497892 DEFB132Q7Z7B7 95 aa15.19■□□□□ 0.02
ERCC8-208ENST00000497892 PCDH11XQ9BZA7 1347 aa15.18■□□□□ 0.02
ERCC8-208ENST00000497892 PCDH11YQ9BZA8 1340 aa15.18■□□□□ 0.02
ERCC8-208ENST00000497892 BTAF1O14981 1849 aa15.18■□□□□ 0.02
ERCC8-208ENST00000497892 MAP3K13O43283 966 aa15.18■□□□□ 0.02
ERCC8-208ENST00000497892 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
ERCC8-208ENST00000497892 DDX54Q8TDD1 881 aaKnown RBP15.18■□□□□ 0.02
ERCC8-208ENST00000497892 TOGARAM1Q9Y4F4 1720 aa15.17■□□□□ 0.02
ERCC8-208ENST00000497892 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
ERCC8-208ENST00000497892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■■□□□ 12.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms