RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 BTAF1O14981 1849 aa25.39■■□□□ 1.65
ATPAF2-209ENST00000497871 HSP90AB2PQ58FF8 381 aa25.38■■□□□ 1.65
ATPAF2-209ENST00000497871 RAPGEF4Q8WZA2 1011 aa25.38■■□□□ 1.65
ATPAF2-209ENST00000497871 CARD14Q9BXL6 1004 aa25.38■■□□□ 1.65
ATPAF2-209ENST00000497871 FHDC1Q9C0D6 1143 aaPredicted RBP25.38■■□□□ 1.65
ATPAF2-209ENST00000497871 MEGF6O75095 1541 aa25.37■■□□□ 1.65
ATPAF2-209ENST00000497871 SMG6Q86US8 1419 aaKnown RBP25.37■■□□□ 1.65
ATPAF2-209ENST00000497871 INSRP06213 1382 aa25.36■■□□□ 1.65
ATPAF2-209ENST00000497871 KIF24Q5T7B8 1368 aa25.36■■□□□ 1.65
ATPAF2-209ENST00000497871 USHBP1Q8N6Y0 703 aa25.36■■□□□ 1.65
ATPAF2-209ENST00000497871 ARXQ96QS3 562 aa25.36■■□□□ 1.65
ATPAF2-209ENST00000497871 PAPPAQ13219 1627 aa25.36■■□□□ 1.65
ATPAF2-209ENST00000497871 SLC16A10Q8TF71 515 aa25.35■■□□□ 1.65
ATPAF2-209ENST00000497871 TATP17735 454 aaPredicted RBP25.34■■□□□ 1.65
ATPAF2-209ENST00000497871 CLSPNQ9HAW4 1339 aa25.34■■□□□ 1.65
ATPAF2-209ENST00000497871 FLT4P35916 1363 aa25.33■■□□□ 1.65
ATPAF2-209ENST00000497871 MYOM1P52179 1685 aa25.32■■□□□ 1.64
ATPAF2-209ENST00000497871 NSD2O96028 1365 aa25.32■■□□□ 1.64
ATPAF2-209ENST00000497871 TFCP2L1Q9NZI6 479 aa25.32■■□□□ 1.64
ATPAF2-209ENST00000497871 KCNQ4P56696 695 aa25.31■■□□□ 1.64
ATPAF2-209ENST00000497871 PNPLA7Q6ZV29 1317 aa25.3■■□□□ 1.64
ATPAF2-209ENST00000497871 CCNL1Q9UK58 526 aaPredicted RBP25.29■■□□□ 1.64
ATPAF2-209ENST00000497871 NSD3Q9BZ95 1437 aa25.29■■□□□ 1.64
ATPAF2-209ENST00000497871 RGPD2P0DJD1 1756 aa25.28■■□□□ 1.64
ATPAF2-209ENST00000497871 PCGF6Q9BYE7 350 aa25.28■■□□□ 1.64
ATPAF2-209ENST00000497871 EMILIN1Q9Y6C2 1016 aa25.28■■□□□ 1.64
ATPAF2-209ENST00000497871 PCDH11XQ9BZA7 1347 aa25.27■■□□□ 1.64
ATPAF2-209ENST00000497871 PCDH11YQ9BZA8 1340 aa25.27■■□□□ 1.64
ATPAF2-209ENST00000497871 MAP3K5Q99683 1374 aa25.27■■□□□ 1.64
ATPAF2-209ENST00000497871 POLD1P28340 1107 aa25.26■■□□□ 1.63
ATPAF2-209ENST00000497871 SHANK3Q9BYB0 1731 aa25.24■■□□□ 1.63
ATPAF2-209ENST00000497871 PPM1GO15355 546 aaPredicted RBP25.24■■□□□ 1.63
ATPAF2-209ENST00000497871 HMGB2P26583 209 aaKnown RBP25.24■■□□□ 1.63
ATPAF2-209ENST00000497871 DOT1LQ8TEK3 1739 aa25.23■■□□□ 1.63
ATPAF2-209ENST00000497871 WASHC2AQ641Q2 1341 aa25.23■■□□□ 1.63
ATPAF2-209ENST00000497871 CYP27B1O15528 508 aa25.23■■□□□ 1.63
ATPAF2-209ENST00000497871 UTRNP46939 3433 aa25.22■■□□□ 1.63
ATPAF2-209ENST00000497871 KIF20BQ96Q89 1820 aa25.21■■□□□ 1.63
ATPAF2-209ENST00000497871 MPRIPQ6WCQ1 1025 aa25.21■■□□□ 1.63
ATPAF2-209ENST00000497871 LY75O60449 1722 aa25.2■■□□□ 1.62
ATPAF2-209ENST00000497871 NKX1-1Q15270 411 aaPredicted RBP25.18■■□□□ 1.62
ATPAF2-209ENST00000497871 COL23A1Q86Y22 540 aaPredicted RBP25.18■■□□□ 1.62
ATPAF2-209ENST00000497871 POLKQ9UBT6 870 aa25.18■■□□□ 1.62
ATPAF2-209ENST00000497871 SPG7Q9UQ90 795 aa25.18■■□□□ 1.62
ATPAF2-209ENST00000497871 QSER1Q2KHR3 1735 aa25.17■■□□□ 1.62
ATPAF2-209ENST00000497871 EYA1Q99502 592 aa25.17■■□□□ 1.62
ATPAF2-209ENST00000497871 POLR3GLQ9BT43 218 aa25.17■■□□□ 1.62
ATPAF2-209ENST00000497871 MSH5O43196 834 aa25.16■■□□□ 1.62
ATPAF2-209ENST00000497871 NCAPD2Q15021 1401 aa25.16■■□□□ 1.62
ATPAF2-209ENST00000497871 KLHL34Q8N239 644 aa25.16■■□□□ 1.62
ATPAF2-209ENST00000497871 SMARCC1Q92922 1105 aaPredicted RBP25.16■■□□□ 1.62
ATPAF2-209ENST00000497871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.16■■□□□ 1.62
ATPAF2-209ENST00000497871 PALLDQ8WX93 1383 aa25.16■■□□□ 1.62
ATPAF2-209ENST00000497871 EIF4G2P78344 907 aaKnown RBP eCLIP25.15■■□□□ 1.62
ATPAF2-209ENST00000497871 GPR162Q16538 588 aa25.15■■□□□ 1.62
ATPAF2-209ENST00000497871 FLAD1Q8NFF5 587 aa25.14■■□□□ 1.62
ATPAF2-209ENST00000497871 ZNF784Q8NCA9 323 aaPredicted RBP25.13■■□□□ 1.61
ATPAF2-209ENST00000497871 PIGBQ92521 554 aa25.13■■□□□ 1.61
ATPAF2-209ENST00000497871 COL24A1Q17RW2 1714 aa25.1■■□□□ 1.61
ATPAF2-209ENST00000497871 HSPA5P11021 654 aaKnown RBP25.1■■□□□ 1.61
ATPAF2-209ENST00000497871 TNNT2P45379 298 aaPredicted RBP25.1■■□□□ 1.61
ATPAF2-209ENST00000497871 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
ATPAF2-209ENST00000497871 PANK3Q9H999 370 aa25.09■■□□□ 1.61
ATPAF2-209ENST00000497871 EIF4A2Q14240 407 aaKnown RBP25.08■■□□□ 1.61
ATPAF2-209ENST00000497871 NLGN2Q8NFZ4 835 aa25.08■■□□□ 1.61
ATPAF2-209ENST00000497871 TUBGCP6Q96RT7 1819 aa25.07■■□□□ 1.6
ATPAF2-209ENST00000497871 PHKG2P15735 406 aa25.07■■□□□ 1.6
ATPAF2-209ENST00000497871 MSL1Q68DK7 614 aa25.06■■□□□ 1.6
ATPAF2-209ENST00000497871 AK7Q96M32 723 aa25.06■■□□□ 1.6
ATPAF2-209ENST00000497871 TMOD3Q9NYL9 352 aa25.06■■□□□ 1.6
ATPAF2-209ENST00000497871 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
ATPAF2-209ENST00000497871 ANKRD26Q9UPS8 1709 aa25.06■■□□□ 1.6
ATPAF2-209ENST00000497871 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
ATPAF2-209ENST00000497871 MAP2P11137 1827 aaKnown RBP25.05■■□□□ 1.6
ATPAF2-209ENST00000497871 LOC102724428A0A0B4J2F2 783 aa25.04■■□□□ 1.6
ATPAF2-209ENST00000497871 SIK1P57059 783 aa25.04■■□□□ 1.6
ATPAF2-209ENST00000497871 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
ATPAF2-209ENST00000497871 PLEKHG2Q9H7P9 1386 aa25.03■■□□□ 1.6
ATPAF2-209ENST00000497871 ASAP1Q9ULH1 1129 aa25.02■■□□□ 1.6
ATPAF2-209ENST00000497871 CD2APQ9Y5K6 639 aa25.02■■□□□ 1.6
ATPAF2-209ENST00000497871 C5P01031 1676 aa25.01■■□□□ 1.59
ATPAF2-209ENST00000497871 TOGARAM1Q9Y4F4 1720 aa25.01■■□□□ 1.59
ATPAF2-209ENST00000497871 GRIN3BO60391 1043 aa25.01■■□□□ 1.59
ATPAF2-209ENST00000497871 IGSF1Q8N6C5 1336 aa25.01■■□□□ 1.59
ATPAF2-209ENST00000497871 AMIGO3Q86WK7 504 aa25■■□□□ 1.59
ATPAF2-209ENST00000497871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.99■■□□□ 1.59
ATPAF2-209ENST00000497871 ITGB4P16144 1822 aa24.99■■□□□ 1.59
ATPAF2-209ENST00000497871 SSFA2P28290 1259 aa24.99■■□□□ 1.59
ATPAF2-209ENST00000497871 CHD4Q14839 1912 aa24.99■■□□□ 1.59
ATPAF2-209ENST00000497871 LINC00116Q8NCU8 138 aa24.99■■□□□ 1.59
ATPAF2-209ENST00000497871 ATG3Q9NT62 314 aa24.99■■□□□ 1.59
ATPAF2-209ENST00000497871 PHF14O94880 888 aa24.98■■□□□ 1.59
ATPAF2-209ENST00000497871 ATP6V1AP38606 617 aa24.98■■□□□ 1.59
ATPAF2-209ENST00000497871 PLEKHO1Q53GL0 409 aaPredicted RBP24.98■■□□□ 1.59
ATPAF2-209ENST00000497871 MORC1Q86VD1 984 aa24.98■■□□□ 1.59
ATPAF2-209ENST00000497871 GOLGB1Q14789 3259 aaKnown RBP24.97■■□□□ 1.59
ATPAF2-209ENST00000497871 ERVV-2B6SEH9 535 aa24.97■■□□□ 1.59
ATPAF2-209ENST00000497871 HSP90AB1P08238 724 aaKnown RBP24.97■■□□□ 1.59
ATPAF2-209ENST00000497871 YBX3P16989 372 aaKnown RBP eCLIP24.97■■□□□ 1.59
ATPAF2-209ENST00000497871 C4BP0C0L5 1744 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms