RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 USHBP1Q8N6Y0 703 aa15.77■□□□□ 0.12
HPS1-213ENST00000497527 CERKQ8TCT0 537 aa15.77■□□□□ 0.12
HPS1-213ENST00000497527 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
HPS1-213ENST00000497527 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
HPS1-213ENST00000497527 NLRP2Q9NX02 1062 aa15.77■□□□□ 0.12
HPS1-213ENST00000497527 COL5A2P05997 1499 aaPredicted RBP15.77■□□□□ 0.11
HPS1-213ENST00000497527 WDR17Q8IZU2 1322 aa15.76■□□□□ 0.11
HPS1-213ENST00000497527 PIP4K2BP78356 416 aa15.76■□□□□ 0.11
HPS1-213ENST00000497527 ZNF428Q96B54 188 aa15.76■□□□□ 0.11
HPS1-213ENST00000497527 PKD1L3Q7Z443 1732 aa15.76■□□□□ 0.11
HPS1-213ENST00000497527 ZNF853P0CG23 659 aa15.75■□□□□ 0.11
HPS1-213ENST00000497527 TATP17735 454 aaPredicted RBP15.75■□□□□ 0.11
HPS1-213ENST00000497527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.75■□□□□ 0.11
HPS1-213ENST00000497527 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
HPS1-213ENST00000497527 BABAM1Q9NWV8 329 aa15.74■□□□□ 0.11
HPS1-213ENST00000497527 AKAP4Q5JQC9 854 aa15.73■□□□□ 0.11
HPS1-213ENST00000497527 C1orf141Q5JVX7 400 aa15.73■□□□□ 0.11
HPS1-213ENST00000497527 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
HPS1-213ENST00000497527 LAS1LQ9Y4W2 734 aaKnown RBP15.73■□□□□ 0.11
HPS1-213ENST00000497527 PLCH1Q4KWH8 1693 aa15.73■□□□□ 0.11
HPS1-213ENST00000497527 NWD2Q9ULI1 1742 aa15.72■□□□□ 0.11
HPS1-213ENST00000497527 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
HPS1-213ENST00000497527 EVA1CP58658 441 aa15.72■□□□□ 0.11
HPS1-213ENST00000497527 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
HPS1-213ENST00000497527 ZNF530Q6P9A1 599 aaPredicted RBP15.72■□□□□ 0.11
HPS1-213ENST00000497527 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
HPS1-213ENST00000497527 TSR2Q969E8 191 aaKnown RBP15.72■□□□□ 0.11
HPS1-213ENST00000497527 CRB1P82279 1406 aa15.71■□□□□ 0.11
HPS1-213ENST00000497527 ADAMTS7Q9UKP4 1686 aa15.71■□□□□ 0.11
HPS1-213ENST00000497527 MCM10Q7L590 875 aa15.71■□□□□ 0.11
HPS1-213ENST00000497527 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.11
HPS1-213ENST00000497527 SCN11AQ9UI33 1791 aa15.71■□□□□ 0.11
HPS1-213ENST00000497527 JCADQ9P266 1359 aa15.71■□□□□ 0.11
HPS1-213ENST00000497527 CACNA1FO60840 1977 aa15.7■□□□□ 0.1
HPS1-213ENST00000497527 CHL1O00533 1208 aa15.7■□□□□ 0.1
HPS1-213ENST00000497527 DCTN1Q14203 1278 aa15.7■□□□□ 0.1
HPS1-213ENST00000497527 CARD10Q9BWT7 1032 aa15.7■□□□□ 0.1
HPS1-213ENST00000497527 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
HPS1-213ENST00000497527 MS4A1P11836 297 aa15.69■□□□□ 0.1
HPS1-213ENST00000497527 RARSP54136 660 aaKnown RBP15.69■□□□□ 0.1
HPS1-213ENST00000497527 ALDH1L2Q3SY69 923 aa15.69■□□□□ 0.1
HPS1-213ENST00000497527 MEGF6O75095 1541 aa15.68■□□□□ 0.1
HPS1-213ENST00000497527 NRAPQ86VF7 1730 aa15.68■□□□□ 0.1
HPS1-213ENST00000497527 WNK3Q9BYP7 1800 aa15.68■□□□□ 0.1
HPS1-213ENST00000497527 KDM3BQ7LBC6 1761 aa15.68■□□□□ 0.1
HPS1-213ENST00000497527 CEMIPQ8WUJ3 1361 aa15.68■□□□□ 0.1
HPS1-213ENST00000497527 HSP90AB1P08238 724 aaKnown RBP15.68■□□□□ 0.1
HPS1-213ENST00000497527 CANXP27824 592 aaKnown RBP15.68■□□□□ 0.1
HPS1-213ENST00000497527 SOS1Q07889 1333 aaPredicted RBP15.68■□□□□ 0.1
HPS1-213ENST00000497527 SIPA1L3O60292 1781 aaPredicted RBP15.67■□□□□ 0.1
HPS1-213ENST00000497527 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
HPS1-213ENST00000497527 TAF7Q15545 349 aaPredicted RBP15.67■□□□□ 0.1
HPS1-213ENST00000497527 IFNL2Q8IZJ0 200 aa15.67■□□□□ 0.1
HPS1-213ENST00000497527 PPP4R2Q9NY27 417 aa15.67■□□□□ 0.1
HPS1-213ENST00000497527 BTG4Q9NY30 223 aa15.67■□□□□ 0.1
HPS1-213ENST00000497527 IL2RBP14784 551 aa15.66■□□□□ 0.1
HPS1-213ENST00000497527 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
HPS1-213ENST00000497527 STRN4Q9NRL3 753 aa15.66■□□□□ 0.1
HPS1-213ENST00000497527 TSPYL4Q9UJ04 414 aa15.66■□□□□ 0.1
HPS1-213ENST00000497527 KIF16BQ96L93 1317 aa15.66■□□□□ 0.1
HPS1-213ENST00000497527 TEFQ10587 303 aa15.65■□□□□ 0.1
HPS1-213ENST00000497527 PDE3AQ14432 1141 aa15.65■□□□□ 0.1
HPS1-213ENST00000497527 TWISTNBQ3B726 338 aaPredicted RBP15.65■□□□□ 0.1
HPS1-213ENST00000497527 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
HPS1-213ENST00000497527 SMC4Q9NTJ3 1288 aa15.65■□□□□ 0.1
HPS1-213ENST00000497527 SPATA31A6Q5VVP1 1343 aa15.65■□□□□ 0.1
HPS1-213ENST00000497527 PCDH11XQ9BZA7 1347 aa15.65■□□□□ 0.1
HPS1-213ENST00000497527 PCDH11YQ9BZA8 1340 aa15.65■□□□□ 0.1
HPS1-213ENST00000497527 RNMTO43148 476 aaKnown RBP15.64■□□□□ 0.09
HPS1-213ENST00000497527 BCAR3O75815 825 aa15.64■□□□□ 0.09
HPS1-213ENST00000497527 BRPF1P55201 1214 aaPredicted RBP15.64■□□□□ 0.09
HPS1-213ENST00000497527 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
HPS1-213ENST00000497527 IPO8O15397 1037 aaKnown RBP15.63■□□□□ 0.09
HPS1-213ENST00000497527 VAMP4O75379 141 aa15.63■□□□□ 0.09
HPS1-213ENST00000497527 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
HPS1-213ENST00000497527 PHKG2P15735 406 aa15.62■□□□□ 0.09
HPS1-213ENST00000497527 ZKSCAN2Q63HK3 967 aa15.62■□□□□ 0.09
HPS1-213ENST00000497527 ZCRB1Q8TBF4 217 aaKnown RBP15.62■□□□□ 0.09
HPS1-213ENST00000497527 CDCA7Q9BWT1 371 aaPredicted RBP15.62■□□□□ 0.09
HPS1-213ENST00000497527 PLIN1O60240 522 aa15.61■□□□□ 0.09
HPS1-213ENST00000497527 ADAMTS2O95450 1211 aa15.61■□□□□ 0.09
HPS1-213ENST00000497527 MPRIPQ6WCQ1 1025 aa15.61■□□□□ 0.09
HPS1-213ENST00000497527 SSH1Q8WYL5 1049 aa15.61■□□□□ 0.09
HPS1-213ENST00000497527 DCAF5Q96JK2 942 aa15.61■□□□□ 0.09
HPS1-213ENST00000497527 SLIT2O94813 1529 aa15.61■□□□□ 0.09
HPS1-213ENST00000497527 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.6■□□□□ 0.09
HPS1-213ENST00000497527 MRC1P22897 1456 aa15.6■□□□□ 0.09
HPS1-213ENST00000497527 NUTM2BA6NNL0 878 aaPredicted RBP15.6■□□□□ 0.09
HPS1-213ENST00000497527 NUTM2EB1AL46 878 aaPredicted RBP15.6■□□□□ 0.09
HPS1-213ENST00000497527 AAMPQ13685 434 aa15.6■□□□□ 0.09
HPS1-213ENST00000497527 NUTM2AQ8IVF1 878 aaPredicted RBP15.6■□□□□ 0.09
HPS1-213ENST00000497527 PELP1Q8IZL8 1130 aaKnown RBP15.6■□□□□ 0.09
HPS1-213ENST00000497527 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
HPS1-213ENST00000497527 FRAT1Q92837 279 aaPredicted RBP15.6■□□□□ 0.09
HPS1-213ENST00000497527 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
HPS1-213ENST00000497527 THRAP3Q9Y2W1 955 aaKnown RBP15.59■□□□□ 0.09
HPS1-213ENST00000497527 BTBD11A6QL63 1104 aa15.58■□□□□ 0.08
HPS1-213ENST00000497527 HOXB7P09629 217 aa15.58■□□□□ 0.08
HPS1-213ENST00000497527 TSPYL6Q8N831 410 aa15.58■□□□□ 0.08
HPS1-213ENST00000497527 ARHGAP45Q92619 1136 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms