RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PLEKHO1Q53GL0 409 aaPredicted RBP26.14■■□□□ 1.78
SCAMP3-209ENST00000497470 USHBP1Q8N6Y0 703 aa26.13■■□□□ 1.77
SCAMP3-209ENST00000497470 GAS2L2Q8NHY3 880 aa26.13■■□□□ 1.77
SCAMP3-209ENST00000497470 SPG7Q9UQ90 795 aa26.13■■□□□ 1.77
SCAMP3-209ENST00000497470 GLI3P10071 1580 aa26.12■■□□□ 1.77
SCAMP3-209ENST00000497470 CCDC9Q9Y3X0 531 aaKnown RBP26.12■■□□□ 1.77
SCAMP3-209ENST00000497470 MAPK8IP3Q9UPT6 1336 aa26.12■■□□□ 1.77
SCAMP3-209ENST00000497470 WNK3Q9BYP7 1800 aa26.11■■□□□ 1.77
SCAMP3-209ENST00000497470 MEGF6O75095 1541 aa26.11■■□□□ 1.77
SCAMP3-209ENST00000497470 RGS17Q9UGC6 210 aaPredicted RBP26.11■■□□□ 1.77
SCAMP3-209ENST00000497470 HTATSF1O43719 755 aaKnown RBP26.1■■□□□ 1.77
SCAMP3-209ENST00000497470 PHF23Q9BUL5 403 aaPredicted RBP26.1■■□□□ 1.77
SCAMP3-209ENST00000497470 PKD1L3Q7Z443 1732 aa26.1■■□□□ 1.77
SCAMP3-209ENST00000497470 ZCRB1Q8TBF4 217 aaKnown RBP26.09■■□□□ 1.77
SCAMP3-209ENST00000497470 THSD7AQ9UPZ6 1657 aa26.09■■□□□ 1.77
SCAMP3-209ENST00000497470 USP35Q9P2H5 1018 aa26.08■■□□□ 1.77
SCAMP3-209ENST00000497470 TNS2Q63HR2 1409 aa26.07■■□□□ 1.76
SCAMP3-209ENST00000497470 EXOC5O00471 708 aa26.07■■□□□ 1.76
SCAMP3-209ENST00000497470 CCDC27Q2M243 656 aa26.07■■□□□ 1.76
SCAMP3-209ENST00000497470 PHACTR3Q96KR7 559 aa26.07■■□□□ 1.76
SCAMP3-209ENST00000497470 NFE2L2Q16236 605 aa26.06■■□□□ 1.76
SCAMP3-209ENST00000497470 PCDH11XQ9BZA7 1347 aa26.06■■□□□ 1.76
SCAMP3-209ENST00000497470 PCDH11YQ9BZA8 1340 aa26.06■■□□□ 1.76
SCAMP3-209ENST00000497470 RXRBP28702 533 aa26.05■■□□□ 1.76
SCAMP3-209ENST00000497470 HSP90AB1P08238 724 aaKnown RBP26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 TMPOP42166 694 aaKnown RBP26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 LMOD3Q0VAK6 560 aa26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 NKX1-1Q15270 411 aaPredicted RBP26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 DDB1Q16531 1140 aa26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 FAM98CQ17RN3 349 aaKnown RBP26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 MTHFSDQ2M296 383 aaKnown RBP26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 AKAP4Q5JQC9 854 aa26.04■■□□□ 1.76
SCAMP3-209ENST00000497470 IFNL2Q8IZJ0 200 aa26.03■■□□□ 1.76
SCAMP3-209ENST00000497470 APAF1O14727 1248 aa26.02■■□□□ 1.76
SCAMP3-209ENST00000497470 BCL9O00512 1426 aa26.02■■□□□ 1.76
SCAMP3-209ENST00000497470 CCDC146Q8IYE0 955 aa26■■□□□ 1.75
SCAMP3-209ENST00000497470 LRRC37A3O60309 1634 aa25.99■■□□□ 1.75
SCAMP3-209ENST00000497470 GNAT3A8MTJ3 354 aa25.99■■□□□ 1.75
SCAMP3-209ENST00000497470 PHKG2P15735 406 aa25.99■■□□□ 1.75
SCAMP3-209ENST00000497470 C1orf141Q5JVX7 400 aa25.99■■□□□ 1.75
SCAMP3-209ENST00000497470 ZNF530Q6P9A1 599 aaPredicted RBP25.99■■□□□ 1.75
SCAMP3-209ENST00000497470 POTEAQ6S8J7 498 aa25.99■■□□□ 1.75
SCAMP3-209ENST00000497470 MAP3K5Q99683 1374 aa25.98■■□□□ 1.75
SCAMP3-209ENST00000497470 SEPT12Q8IYM1 358 aa25.98■■□□□ 1.75
SCAMP3-209ENST00000497470 CYP27B1O15528 508 aa25.97■■□□□ 1.75
SCAMP3-209ENST00000497470 DCAF5Q96JK2 942 aa25.97■■□□□ 1.75
SCAMP3-209ENST00000497470 RIPK4P57078 832 aa25.96■■□□□ 1.75
SCAMP3-209ENST00000497470 SHANK3Q9BYB0 1731 aa25.96■■□□□ 1.75
SCAMP3-209ENST00000497470 ADAMTS7Q9UKP4 1686 aa25.96■■□□□ 1.75
SCAMP3-209ENST00000497470 CEMIPQ8WUJ3 1361 aa25.95■■□□□ 1.74
SCAMP3-209ENST00000497470 CALD1Q05682 793 aaKnown RBP25.94■■□□□ 1.74
SCAMP3-209ENST00000497470 PDE3BQ13370 1112 aa25.94■■□□□ 1.74
SCAMP3-209ENST00000497470 RTF1Q92541 710 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-209ENST00000497470 WDR63Q8IWG1 891 aa25.92■■□□□ 1.74
SCAMP3-209ENST00000497470 TRIM35Q9UPQ4 493 aa25.92■■□□□ 1.74
SCAMP3-209ENST00000497470 ERVV-2B6SEH9 535 aa25.91■■□□□ 1.74
SCAMP3-209ENST00000497470 BABAM1Q9NWV8 329 aa25.91■■□□□ 1.74
SCAMP3-209ENST00000497470 IL16Q14005 1332 aa25.9■■□□□ 1.74
SCAMP3-209ENST00000497470 ZNF521Q96K83 1311 aa25.9■■□□□ 1.74
SCAMP3-209ENST00000497470 WWC1Q8IX03 1113 aa25.9■■□□□ 1.74
SCAMP3-209ENST00000497470 MARCH10Q8NA82 808 aaPredicted RBP25.9■■□□□ 1.74
SCAMP3-209ENST00000497470 DLG5Q8TDM6 1919 aa25.9■■□□□ 1.74
SCAMP3-209ENST00000497470 ZBED9Q6R2W3 1325 aa25.88■■□□□ 1.73
SCAMP3-209ENST00000497470 RNMTO43148 476 aaKnown RBP25.88■■□□□ 1.73
SCAMP3-209ENST00000497470 DDX54Q8TDD1 881 aaKnown RBP25.88■■□□□ 1.73
SCAMP3-209ENST00000497470 RGS12O14924 1447 aa25.88■■□□□ 1.73
SCAMP3-209ENST00000497470 KRT27Q7Z3Y8 459 aa25.87■■□□□ 1.73
SCAMP3-209ENST00000497470 IL17REQ8NFR9 667 aa25.87■■□□□ 1.73
SCAMP3-209ENST00000497470 MRC1P22897 1456 aa25.86■■□□□ 1.73
SCAMP3-209ENST00000497470 A0A0G2JS52 829 aa25.86■■□□□ 1.73
SCAMP3-209ENST00000497470 HNRNPUQ00839 825 aaKnown RBP eCLIP25.86■■□□□ 1.73
SCAMP3-209ENST00000497470 MYT1Q01538 1121 aa25.86■■□□□ 1.73
SCAMP3-209ENST00000497470 SCN11AQ9UI33 1791 aa25.85■■□□□ 1.73
SCAMP3-209ENST00000497470 RRP7AQ9Y3A4 280 aaKnown RBP25.85■■□□□ 1.73
SCAMP3-209ENST00000497470 KDM6AO15550 1401 aaPredicted RBP25.85■■□□□ 1.73
SCAMP3-209ENST00000497470 FAM196AQ6ZSG2 479 aa25.84■■□□□ 1.73
SCAMP3-209ENST00000497470 NEUROD2Q15784 382 aa25.83■■□□□ 1.73
SCAMP3-209ENST00000497470 MPRIPQ6WCQ1 1025 aa25.82■■□□□ 1.72
SCAMP3-209ENST00000497470 SLC52A2Q9HAB3 445 aa25.81■■□□□ 1.72
SCAMP3-209ENST00000497470 TEFQ10587 303 aa25.8■■□□□ 1.72
SCAMP3-209ENST00000497470 TAF7Q15545 349 aaPredicted RBP25.8■■□□□ 1.72
SCAMP3-209ENST00000497470 LGR6Q9HBX8 967 aa25.8■■□□□ 1.72
SCAMP3-209ENST00000497470 IFT57Q9NWB7 429 aa25.8■■□□□ 1.72
SCAMP3-209ENST00000497470 BRWD3Q6RI45 1802 aa25.79■■□□□ 1.72
SCAMP3-209ENST00000497470 ZNF853P0CG23 659 aa25.79■■□□□ 1.72
SCAMP3-209ENST00000497470 CFAP44Q96MT7 982 aa25.79■■□□□ 1.72
SCAMP3-209ENST00000497470 GNAI1P63096 354 aa25.78■■□□□ 1.72
SCAMP3-209ENST00000497470 GOLGA2Q08379 1002 aa25.78■■□□□ 1.72
SCAMP3-209ENST00000497470 MCM10Q7L590 875 aa25.78■■□□□ 1.72
SCAMP3-209ENST00000497470 CHL1O00533 1208 aa25.77■■□□□ 1.72
SCAMP3-209ENST00000497470 CABP4P57796 275 aa25.77■■□□□ 1.72
SCAMP3-209ENST00000497470 VIRMAQ69YN4 1812 aaKnown RBP25.75■■□□□ 1.71
SCAMP3-209ENST00000497470 SIPA1L3O60292 1781 aaPredicted RBP25.75■■□□□ 1.71
SCAMP3-209ENST00000497470 E9PSI1 815 aa25.75■■□□□ 1.71
SCAMP3-209ENST00000497470 DCTN1Q14203 1278 aa25.75■■□□□ 1.71
SCAMP3-209ENST00000497470 TRMT2AQ8IZ69 625 aaKnown RBP25.74■■□□□ 1.71
SCAMP3-209ENST00000497470 MYH16Q9H6N6 1097 aa25.73■■□□□ 1.71
SCAMP3-209ENST00000497470 TMOD3Q9NYL9 352 aa25.73■■□□□ 1.71
SCAMP3-209ENST00000497470 TOGARAM1Q9Y4F4 1720 aa25.73■■□□□ 1.71
SCAMP3-209ENST00000497470 NHSQ6T4R5 1651 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms