RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 SMIM5Q71RC9 77 aa21.16■□□□□ 0.98
RNF220-218ENST00000497469 BCS1LQ9Y276 419 aa21.16■□□□□ 0.98
RNF220-218ENST00000497469 IL2RBP14784 551 aa21.15■□□□□ 0.98
RNF220-218ENST00000497469 C9orf131Q5VYM1 1079 aa21.15■□□□□ 0.98
RNF220-218ENST00000497469 DDX54Q8TDD1 881 aaKnown RBP21.15■□□□□ 0.98
RNF220-218ENST00000497469 KIAA1210Q9ULL0 1709 aa21.15■□□□□ 0.98
RNF220-218ENST00000497469 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.97
RNF220-218ENST00000497469 ABHD8Q96I13 439 aa21.14■□□□□ 0.97
RNF220-218ENST00000497469 NLRP2Q9NX02 1062 aa21.14■□□□□ 0.97
RNF220-218ENST00000497469 NSD2O96028 1365 aa21.13■□□□□ 0.97
RNF220-218ENST00000497469 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
RNF220-218ENST00000497469 ERBB3P21860 1342 aa21.11■□□□□ 0.97
RNF220-218ENST00000497469 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
RNF220-218ENST00000497469 PRDM10Q9NQV6 1147 aa21.11■□□□□ 0.97
RNF220-218ENST00000497469 PXDNLA1KZ92 1463 aa21.11■□□□□ 0.97
RNF220-218ENST00000497469 C10orf71Q711Q0 1435 aa21.11■□□□□ 0.97
RNF220-218ENST00000497469 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
RNF220-218ENST00000497469 PKD1L3Q7Z443 1732 aa21.1■□□□□ 0.97
RNF220-218ENST00000497469 USP54Q70EL1 1684 aa21.1■□□□□ 0.97
RNF220-218ENST00000497469 MKRN1Q9UHC7 482 aaKnown RBP21.1■□□□□ 0.97
RNF220-218ENST00000497469 AMIGO3Q86WK7 504 aa21.09■□□□□ 0.97
RNF220-218ENST00000497469 QRICH2Q9H0J4 1663 aa21.09■□□□□ 0.97
RNF220-218ENST00000497469 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.97
RNF220-218ENST00000497469 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.97
RNF220-218ENST00000497469 C5P01031 1676 aa21.08■□□□□ 0.96
RNF220-218ENST00000497469 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
RNF220-218ENST00000497469 PHF14O94880 888 aa21.07■□□□□ 0.96
RNF220-218ENST00000497469 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
RNF220-218ENST00000497469 KIAA1551Q9HCM1 1747 aa21.07■□□□□ 0.96
RNF220-218ENST00000497469 A0A0G2JLW4 131 aa21.05■□□□□ 0.96
RNF220-218ENST00000497469 CCDC85CA6NKD9 419 aa21.05■□□□□ 0.96
RNF220-218ENST00000497469 NFAT5O94916 1531 aa21.04■□□□□ 0.96
RNF220-218ENST00000497469 SRPK2P78362 688 aaKnown RBP21.04■□□□□ 0.96
RNF220-218ENST00000497469 FLAD1Q8NFF5 587 aa21.04■□□□□ 0.96
RNF220-218ENST00000497469 KDM2AQ9Y2K7 1162 aa21.04■□□□□ 0.96
RNF220-218ENST00000497469 FCHSD2O94868 740 aa21.03■□□□□ 0.96
RNF220-218ENST00000497469 CTCFP49711 727 aaPredicted RBP21.03■□□□□ 0.96
RNF220-218ENST00000497469 KCNH5Q8NCM2 988 aa21.03■□□□□ 0.96
RNF220-218ENST00000497469 MPHOSPH9Q99550 1183 aa21.03■□□□□ 0.96
RNF220-218ENST00000497469 CABP2Q9NPB3 220 aa21.03■□□□□ 0.96
RNF220-218ENST00000497469 RNF181Q9P0P0 153 aa21.03■□□□□ 0.96
RNF220-218ENST00000497469 TOGARAM1Q9Y4F4 1720 aa21.03■□□□□ 0.96
RNF220-218ENST00000497469 USP47Q96K76 1375 aa21.02■□□□□ 0.96
RNF220-218ENST00000497469 LBX1P52954 281 aa21.02■□□□□ 0.96
RNF220-218ENST00000497469 AIDAQ96BJ3 306 aa21■□□□□ 0.95
RNF220-218ENST00000497469 CABP1Q9NZU7 370 aa21■□□□□ 0.95
RNF220-218ENST00000497469 RGS19P49795 217 aa20.98■□□□□ 0.95
RNF220-218ENST00000497469 AK7Q96M32 723 aa20.97■□□□□ 0.95
RNF220-218ENST00000497469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.96■□□□□ 0.95
RNF220-218ENST00000497469 DPEP1P16444 411 aa20.96■□□□□ 0.95
RNF220-218ENST00000497469 ANKRD24Q8TF21 1146 aa20.96■□□□□ 0.95
RNF220-218ENST00000497469 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
RNF220-218ENST00000497469 TAF1LQ8IZX4 1826 aa20.95■□□□□ 0.94
RNF220-218ENST00000497469 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
RNF220-218ENST00000497469 MMP10P09238 476 aa20.94■□□□□ 0.94
RNF220-218ENST00000497469 TGFB2P61812 414 aa20.93■□□□□ 0.94
RNF220-218ENST00000497469 CFAP44Q96MT7 982 aa20.93■□□□□ 0.94
RNF220-218ENST00000497469 TTC21BQ7Z4L5 1316 aa20.93■□□□□ 0.94
RNF220-218ENST00000497469 UBR3Q6ZT12 1888 aa20.92■□□□□ 0.94
RNF220-218ENST00000497469 TNRC18O15417 2968 aaPredicted RBP20.91■□□□□ 0.94
RNF220-218ENST00000497469 DCAF11Q8TEB1 546 aa20.91■□□□□ 0.94
RNF220-218ENST00000497469 CREBZFQ9NS37 354 aa20.91■□□□□ 0.94
RNF220-218ENST00000497469 PALLDQ8WX93 1383 aa20.9■□□□□ 0.94
RNF220-218ENST00000497469 BRCA1P38398 1863 aaKnown RBP20.9■□□□□ 0.94
RNF220-218ENST00000497469 CNTNAP1P78357 1384 aa20.89■□□□□ 0.93
RNF220-218ENST00000497469 HSPA8P11142 646 aaKnown RBP20.89■□□□□ 0.93
RNF220-218ENST00000497469 VEGFAP15692 232 aaPredicted RBP20.89■□□□□ 0.93
RNF220-218ENST00000497469 ARFGEF1Q9Y6D6 1849 aa20.86■□□□□ 0.93
RNF220-218ENST00000497469 WBP1LQ9NX94 342 aa20.86■□□□□ 0.93
RNF220-218ENST00000497469 LTN1O94822 1766 aa20.85■□□□□ 0.93
RNF220-218ENST00000497469 VEGFBP49765 207 aa20.85■□□□□ 0.93
RNF220-218ENST00000497469 LTV1Q96GA3 475 aaPredicted RBP20.85■□□□□ 0.93
RNF220-218ENST00000497469 KCNA3P22001 575 aa20.84■□□□□ 0.93
RNF220-218ENST00000497469 RASSF7Q02833 373 aa20.84■□□□□ 0.93
RNF220-218ENST00000497469 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
RNF220-218ENST00000497469 SSFA2P28290 1259 aa20.83■□□□□ 0.93
RNF220-218ENST00000497469 SBF1O95248 1867 aa20.82■□□□□ 0.92
RNF220-218ENST00000497469 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
RNF220-218ENST00000497469 ZCRB1Q8TBF4 217 aaKnown RBP20.82■□□□□ 0.92
RNF220-218ENST00000497469 GLTPD2A6NH11 291 aa20.81■□□□□ 0.92
RNF220-218ENST00000497469 MEGF6O75095 1541 aa20.8■□□□□ 0.92
RNF220-218ENST00000497469 TTC21AQ8NDW8 1320 aa20.79■□□□□ 0.92
RNF220-218ENST00000497469 POTECB2RU33 542 aa20.79■□□□□ 0.92
RNF220-218ENST00000497469 DALRD3Q5D0E6 543 aaKnown RBP20.79■□□□□ 0.92
RNF220-218ENST00000497469 LINC00116Q8NCU8 138 aa20.79■□□□□ 0.92
RNF220-218ENST00000497469 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
RNF220-218ENST00000497469 PIM2Q9P1W9 311 aa20.79■□□□□ 0.92
RNF220-218ENST00000497469 GNPATO15228 680 aa20.78■□□□□ 0.92
RNF220-218ENST00000497469 MPRIPQ6WCQ1 1025 aa20.78■□□□□ 0.92
RNF220-218ENST00000497469 POTEIP0CG38 1075 aa20.77■□□□□ 0.92
RNF220-218ENST00000497469 POTEJP0CG39 1038 aa20.77■□□□□ 0.92
RNF220-218ENST00000497469 PDE4DIPQ5VU43 2346 aa20.77■□□□□ 0.92
RNF220-218ENST00000497469 VIRMAQ69YN4 1812 aaKnown RBP20.76■□□□□ 0.91
RNF220-218ENST00000497469 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
RNF220-218ENST00000497469 C4AP0C0L4 1744 aa20.75■□□□□ 0.91
RNF220-218ENST00000497469 FAM208AQ9UK61 1670 aaKnown RBP20.75■□□□□ 0.91
RNF220-218ENST00000497469 CHADLQ6NUI6 762 aa20.75■□□□□ 0.91
RNF220-218ENST00000497469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.75■□□□□ 0.91
RNF220-218ENST00000497469 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
RNF220-218ENST00000497469 CHRNA5P30532 468 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms