RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 COL25A1Q9BXS0 654 aaPredicted RBP9.67□□□□□ -0.86
GGPS1-208ENST00000497327 NDUFB9Q9Y6M9 179 aa9.67□□□□□ -0.86
GGPS1-208ENST00000497327 CNTNAP3BQ96NU0 1288 aa9.66□□□□□ -0.86
GGPS1-208ENST00000497327 CNTNAP3Q9BZ76 1288 aa9.66□□□□□ -0.86
GGPS1-208ENST00000497327 RNF144AP50876 292 aaPredicted RBP9.65□□□□□ -0.86
GGPS1-208ENST00000497327 CCDC125Q86Z20 511 aa9.65□□□□□ -0.86
GGPS1-208ENST00000497327 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
GGPS1-208ENST00000497327 ATP5J2-PTCD1G3V325 749 aa9.64□□□□□ -0.87
GGPS1-208ENST00000497327 SCTRP47872 440 aa9.64□□□□□ -0.87
GGPS1-208ENST00000497327 MCCD1P59942 119 aaPredicted RBP9.64□□□□□ -0.87
GGPS1-208ENST00000497327 CC2D2BQ6DHV5 1058 aa9.64□□□□□ -0.87
GGPS1-208ENST00000497327 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
GGPS1-208ENST00000497327 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
GGPS1-208ENST00000497327 RNF20Q5VTR2 975 aa9.62□□□□□ -0.87
GGPS1-208ENST00000497327 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
GGPS1-208ENST00000497327 A0A1W2PRU2 124 aa9.61□□□□□ -0.87
GGPS1-208ENST00000497327 CDC14CA4D256 554 aa9.61□□□□□ -0.87
GGPS1-208ENST00000497327 GPC1P35052 558 aa9.61□□□□□ -0.87
GGPS1-208ENST00000497327 TRIM52Q96A61 297 aa9.61□□□□□ -0.87
GGPS1-208ENST00000497327 OSBPL3Q9H4L5 887 aa9.61□□□□□ -0.87
GGPS1-208ENST00000497327 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
GGPS1-208ENST00000497327 TRAK2O60296 914 aa9.6□□□□□ -0.87
GGPS1-208ENST00000497327 RHOQP17081 205 aa9.6□□□□□ -0.87
GGPS1-208ENST00000497327 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
GGPS1-208ENST00000497327 MEN1O00255 615 aa9.59□□□□□ -0.87
GGPS1-208ENST00000497327 SLURP2P0DP57 97 aa9.59□□□□□ -0.87
GGPS1-208ENST00000497327 ZNF592Q92610 1267 aa9.59□□□□□ -0.87
GGPS1-208ENST00000497327 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
GGPS1-208ENST00000497327 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
GGPS1-208ENST00000497327 APBB1O00213 710 aa9.58□□□□□ -0.88
GGPS1-208ENST00000497327 GSK3AP49840 483 aa9.58□□□□□ -0.88
GGPS1-208ENST00000497327 ZNF385CQ66K41 422 aaPredicted RBP9.58□□□□□ -0.88
GGPS1-208ENST00000497327 CLN3Q13286 438 aa9.57□□□□□ -0.88
GGPS1-208ENST00000497327 IRF5Q13568 498 aa9.57□□□□□ -0.88
GGPS1-208ENST00000497327 GAS6Q14393 721 aa9.57□□□□□ -0.88
GGPS1-208ENST00000497327 CYP2U1Q7Z449 544 aa9.57□□□□□ -0.88
GGPS1-208ENST00000497327 WHAMMQ8TF30 809 aa9.57□□□□□ -0.88
GGPS1-208ENST00000497327 CCDC85AQ96PX6 553 aaPredicted RBP9.57□□□□□ -0.88
GGPS1-208ENST00000497327 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
GGPS1-208ENST00000497327 GRIP2Q9C0E4 1043 aa9.56□□□□□ -0.88
GGPS1-208ENST00000497327 CDCA7Q9BWT1 371 aaPredicted RBP9.55□□□□□ -0.88
GGPS1-208ENST00000497327 ARHGEF10LQ9HCE6 1279 aa9.55□□□□□ -0.88
GGPS1-208ENST00000497327 BICRAQ9NZM4 1560 aa9.54□□□□□ -0.88
GGPS1-208ENST00000497327 KCNMA1Q12791 1236 aa9.54□□□□□ -0.88
GGPS1-208ENST00000497327 POU4F2Q12837 409 aa9.54□□□□□ -0.88
GGPS1-208ENST00000497327 ZNF837Q96EG3 531 aaPredicted RBP9.54□□□□□ -0.88
GGPS1-208ENST00000497327 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
GGPS1-208ENST00000497327 SPATA31C2B4DYI2 1134 aa9.53□□□□□ -0.88
GGPS1-208ENST00000497327 TRIM22Q8IYM9 498 aa9.53□□□□□ -0.88
GGPS1-208ENST00000497327 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
GGPS1-208ENST00000497327 ARHGEF15O94989 841 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 IL2RAP01589 272 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 DBN1Q16643 649 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
GGPS1-208ENST00000497327 PHTF2Q8N3S3 785 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 NBPF15Q8N660 670 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 NLRP3Q96P20 1036 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 RAB6BQ9NRW1 208 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 DYRK1BQ9Y463 629 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.89
GGPS1-208ENST00000497327 TSGA10IPQ3SY00 556 aa9.51□□□□□ -0.89
GGPS1-208ENST00000497327 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
GGPS1-208ENST00000497327 ADAMTS2O95450 1211 aa9.5□□□□□ -0.89
GGPS1-208ENST00000497327 GNRH1P01148 92 aa9.5□□□□□ -0.89
GGPS1-208ENST00000497327 SVOPQ8N4V2 548 aa9.5□□□□□ -0.89
GGPS1-208ENST00000497327 GMCL1Q96IK5 515 aa9.5□□□□□ -0.89
GGPS1-208ENST00000497327 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
GGPS1-208ENST00000497327 WDR44Q5JSH3 913 aa9.49□□□□□ -0.89
GGPS1-208ENST00000497327 LYPD4Q6UWN0 246 aa9.49□□□□□ -0.89
GGPS1-208ENST00000497327 ESYT1Q9BSJ8 1104 aa9.49□□□□□ -0.89
GGPS1-208ENST00000497327 GPR25O00155 361 aa9.48□□□□□ -0.89
GGPS1-208ENST00000497327 RIPOR1Q6ZS17 1223 aa9.48□□□□□ -0.89
GGPS1-208ENST00000497327 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
GGPS1-208ENST00000497327 CHIC2Q9UKJ5 165 aa9.48□□□□□ -0.89
GGPS1-208ENST00000497327 WASLO00401 505 aaPredicted RBP9.47□□□□□ -0.89
GGPS1-208ENST00000497327 THBS1P07996 1170 aa9.47□□□□□ -0.89
GGPS1-208ENST00000497327 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
GGPS1-208ENST00000497327 CENPCQ03188 943 aa9.47□□□□□ -0.89
GGPS1-208ENST00000497327 TAS1R3Q7RTX0 852 aa9.47□□□□□ -0.89
GGPS1-208ENST00000497327 XAGE2Q96GT9 111 aa9.47□□□□□ -0.89
GGPS1-208ENST00000497327 FHDC1Q9C0D6 1143 aaPredicted RBP9.47□□□□□ -0.89
GGPS1-208ENST00000497327 GDPD2Q9HCC8 539 aa9.47□□□□□ -0.89
GGPS1-208ENST00000497327 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.9
GGPS1-208ENST00000497327 VAC14Q08AM6 782 aa9.46□□□□□ -0.9
GGPS1-208ENST00000497327 GTPBP3Q969Y2 492 aaKnown RBP9.46□□□□□ -0.9
GGPS1-208ENST00000497327 GAS2L1Q99501 681 aaPredicted RBP9.46□□□□□ -0.9
GGPS1-208ENST00000497327 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
GGPS1-208ENST00000497327 PRM3Q9NNZ6 103 aa9.46□□□□□ -0.9
GGPS1-208ENST00000497327 MBIPQ9NS73 344 aa9.46□□□□□ -0.9
GGPS1-208ENST00000497327 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
GGPS1-208ENST00000497327 TIMMDC1Q9NPL8 285 aa9.45□□□□□ -0.9
GGPS1-208ENST00000497327 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
GGPS1-208ENST00000497327 H7C1W4 665 aa9.44□□□□□ -0.9
GGPS1-208ENST00000497327 STAU1O95793 577 aaKnown RBP9.44□□□□□ -0.9
GGPS1-208ENST00000497327 CELA2BP08218 269 aaPredicted RBP9.44□□□□□ -0.9
GGPS1-208ENST00000497327 MCM6Q14566 821 aa9.44□□□□□ -0.9
GGPS1-208ENST00000497327 RSF1Q96T23 1441 aaPredicted RBP9.43□□□□□ -0.9
GGPS1-208ENST00000497327 F11P03951 625 aa9.43□□□□□ -0.9
GGPS1-208ENST00000497327 PRKCSHP14314 528 aaPredicted RBP9.43□□□□□ -0.9
GGPS1-208ENST00000497327 RASSF7Q02833 373 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms