RNA–Protein interactions for RNA: ENST00000496944.1

NIPSNAP1-206, Transcript of nipsnap homolog 1, humanhuman

TSL 2

Gene NIPSNAP1, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-206ENST00000496944 PKD1L3Q7Z443 1732 aa28.64■■■□□ 2.18
NIPSNAP1-206ENST00000496944 AEBP1Q8IUX7 1158 aa28.63■■■□□ 2.17
NIPSNAP1-206ENST00000496944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.63■■■□□ 2.17
NIPSNAP1-206ENST00000496944 ZCRB1Q8TBF4 217 aaKnown RBP28.62■■■□□ 2.17
NIPSNAP1-206ENST00000496944 SHANK3Q9BYB0 1731 aa28.6■■■□□ 2.17
NIPSNAP1-206ENST00000496944 SPG7Q9UQ90 795 aa28.59■■■□□ 2.17
NIPSNAP1-206ENST00000496944 HMOX1P09601 288 aa28.58■■■□□ 2.17
NIPSNAP1-206ENST00000496944 U2AF1L5P0DN76 240 aaPredicted RBP28.58■■■□□ 2.17
NIPSNAP1-206ENST00000496944 U2AF1Q01081 240 aaKnown RBP eCLIP28.58■■■□□ 2.17
NIPSNAP1-206ENST00000496944 MARCH10Q8NA82 808 aaPredicted RBP28.57■■■□□ 2.16
NIPSNAP1-206ENST00000496944 PCDH11XQ9BZA7 1347 aa28.57■■■□□ 2.16
NIPSNAP1-206ENST00000496944 PCDH11YQ9BZA8 1340 aa28.57■■■□□ 2.16
NIPSNAP1-206ENST00000496944 BCL9O00512 1426 aa28.56■■■□□ 2.16
NIPSNAP1-206ENST00000496944 AMOTQ4VCS5 1084 aa28.56■■■□□ 2.16
NIPSNAP1-206ENST00000496944 PLEKHO1Q53GL0 409 aaPredicted RBP28.56■■■□□ 2.16
NIPSNAP1-206ENST00000496944 FAM196AQ6ZSG2 479 aa28.56■■■□□ 2.16
NIPSNAP1-206ENST00000496944 DIEXFQ68CQ4 756 aaKnown RBP28.55■■■□□ 2.16
NIPSNAP1-206ENST00000496944 FCHSD2O94868 740 aa28.54■■■□□ 2.16
NIPSNAP1-206ENST00000496944 DDX54Q8TDD1 881 aaKnown RBP28.54■■■□□ 2.16
NIPSNAP1-206ENST00000496944 RSPH6AQ9H0K4 717 aa28.53■■■□□ 2.16
NIPSNAP1-206ENST00000496944 FAM182BQ5T319 152 aa28.51■■■□□ 2.15
NIPSNAP1-206ENST00000496944 WDR43Q15061 677 aaKnown RBP eCLIP28.5■■■□□ 2.15
NIPSNAP1-206ENST00000496944 PRKAR2BP31323 418 aa28.49■■■□□ 2.15
NIPSNAP1-206ENST00000496944 PNNQ9H307 717 aaKnown RBP28.49■■■□□ 2.15
NIPSNAP1-206ENST00000496944 CYP27B1O15528 508 aa28.48■■■□□ 2.15
NIPSNAP1-206ENST00000496944 IFNL2Q8IZJ0 200 aa28.47■■■□□ 2.15
NIPSNAP1-206ENST00000496944 MRS2Q9HD23 443 aa28.47■■■□□ 2.15
NIPSNAP1-206ENST00000496944 SBF2Q86WG5 1849 aa28.47■■■□□ 2.15
NIPSNAP1-206ENST00000496944 ZNF530Q6P9A1 599 aaPredicted RBP28.46■■■□□ 2.15
NIPSNAP1-206ENST00000496944 PHKG2P15735 406 aa28.45■■■□□ 2.14
NIPSNAP1-206ENST00000496944 NEFMP07197 916 aa28.44■■■□□ 2.14
NIPSNAP1-206ENST00000496944 NKX1-1Q15270 411 aaPredicted RBP28.44■■■□□ 2.14
NIPSNAP1-206ENST00000496944 CCDC125Q86Z20 511 aa28.44■■■□□ 2.14
NIPSNAP1-206ENST00000496944 EP400Q96L91 3159 aa28.43■■■□□ 2.14
NIPSNAP1-206ENST00000496944 HSP90AB1P08238 724 aaKnown RBP28.43■■■□□ 2.14
NIPSNAP1-206ENST00000496944 CCDC184Q52MB2 194 aa28.43■■■□□ 2.14
NIPSNAP1-206ENST00000496944 C1orf141Q5JVX7 400 aa28.43■■■□□ 2.14
NIPSNAP1-206ENST00000496944 GAS2L2Q8NHY3 880 aa28.43■■■□□ 2.14
NIPSNAP1-206ENST00000496944 NHSQ6T4R5 1651 aa28.42■■■□□ 2.14
NIPSNAP1-206ENST00000496944 SOCS7O14512 581 aa28.42■■■□□ 2.14
NIPSNAP1-206ENST00000496944 DOT1LQ8TEK3 1739 aa28.41■■■□□ 2.14
NIPSNAP1-206ENST00000496944 MTHFSDQ2M296 383 aaKnown RBP28.41■■■□□ 2.14
NIPSNAP1-206ENST00000496944 UPF1Q92900 1129 aaKnown RBP eCLIP28.41■■■□□ 2.14
NIPSNAP1-206ENST00000496944 AKAP4Q5JQC9 854 aa28.4■■■□□ 2.14
NIPSNAP1-206ENST00000496944 PHACTR3Q96KR7 559 aa28.4■■■□□ 2.14
NIPSNAP1-206ENST00000496944 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.14
NIPSNAP1-206ENST00000496944 PLEKHF1Q96S99 279 aa28.39■■■□□ 2.14
NIPSNAP1-206ENST00000496944 TNS1Q9HBL0 1735 aaKnown RBP28.38■■■□□ 2.13
NIPSNAP1-206ENST00000496944 TRIM37O94972 964 aa28.38■■■□□ 2.13
NIPSNAP1-206ENST00000496944 BCL11BQ9C0K0 894 aaPredicted RBP28.38■■■□□ 2.13
NIPSNAP1-206ENST00000496944 ADAMTS8Q9UP79 889 aa28.38■■■□□ 2.13
NIPSNAP1-206ENST00000496944 MAPK8IP3Q9UPT6 1336 aa28.38■■■□□ 2.13
NIPSNAP1-206ENST00000496944 CCER2I3L3R5 266 aa28.37■■■□□ 2.13
NIPSNAP1-206ENST00000496944 SF3B2Q13435 895 aaKnown RBP28.37■■■□□ 2.13
NIPSNAP1-206ENST00000496944 PNISRQ8TF01 805 aaKnown RBP28.37■■■□□ 2.13
NIPSNAP1-206ENST00000496944 DCAF5Q96JK2 942 aa28.37■■■□□ 2.13
NIPSNAP1-206ENST00000496944 TOGARAM1Q9Y4F4 1720 aa28.36■■■□□ 2.13
NIPSNAP1-206ENST00000496944 MAP3K5Q99683 1374 aa28.35■■■□□ 2.13
NIPSNAP1-206ENST00000496944 ACSBG1Q96GR2 724 aa28.34■■■□□ 2.13
NIPSNAP1-206ENST00000496944 SCN11AQ9UI33 1791 aa28.33■■■□□ 2.13
NIPSNAP1-206ENST00000496944 RUNDC1Q96C34 613 aa28.33■■■□□ 2.13
NIPSNAP1-206ENST00000496944 KDM6AO15550 1401 aaPredicted RBP28.33■■■□□ 2.13
NIPSNAP1-206ENST00000496944 ADAMTS7Q9UKP4 1686 aa28.32■■■□□ 2.12
NIPSNAP1-206ENST00000496944 GNAT3A8MTJ3 354 aa28.32■■■□□ 2.12
NIPSNAP1-206ENST00000496944 ITGB4P16144 1822 aa28.32■■■□□ 2.12
NIPSNAP1-206ENST00000496944 ERVV-2B6SEH9 535 aa28.31■■■□□ 2.12
NIPSNAP1-206ENST00000496944 KCNQ2O43526 872 aa28.31■■■□□ 2.12
NIPSNAP1-206ENST00000496944 PRIM1P49642 420 aaKnown RBP28.31■■■□□ 2.12
NIPSNAP1-206ENST00000496944 BTAF1O14981 1849 aa28.3■■■□□ 2.12
NIPSNAP1-206ENST00000496944 NFE2L2Q16236 605 aa28.3■■■□□ 2.12
NIPSNAP1-206ENST00000496944 MPRIPQ6WCQ1 1025 aa28.29■■■□□ 2.12
NIPSNAP1-206ENST00000496944 SYTL4Q96C24 671 aaPredicted RBP28.29■■■□□ 2.12
NIPSNAP1-206ENST00000496944 VIRMAQ69YN4 1812 aaKnown RBP28.29■■■□□ 2.12
NIPSNAP1-206ENST00000496944 HTATSF1O43719 755 aaKnown RBP28.28■■■□□ 2.12
NIPSNAP1-206ENST00000496944 BAG6P46379 1132 aa28.28■■■□□ 2.12
NIPSNAP1-206ENST00000496944 MIER1Q8N108 512 aa28.28■■■□□ 2.12
NIPSNAP1-206ENST00000496944 RGPD3A6NKT7 1758 aaPredicted RBP28.27■■■□□ 2.12
NIPSNAP1-206ENST00000496944 RGPD4Q7Z3J3 1758 aa28.27■■■□□ 2.12
NIPSNAP1-206ENST00000496944 APBA3O96018 575 aa28.27■■■□□ 2.12
NIPSNAP1-206ENST00000496944 PTF1AQ7RTS3 328 aa28.27■■■□□ 2.12
NIPSNAP1-206ENST00000496944 CCDC146Q8IYE0 955 aa28.27■■■□□ 2.12
NIPSNAP1-206ENST00000496944 DLG5Q8TDM6 1919 aa28.26■■■□□ 2.11
NIPSNAP1-206ENST00000496944 RNMTO43148 476 aaKnown RBP28.26■■■□□ 2.11
NIPSNAP1-206ENST00000496944 TMOD3Q9NYL9 352 aa28.26■■■□□ 2.11
NIPSNAP1-206ENST00000496944 MRC1P22897 1456 aa28.26■■■□□ 2.11
NIPSNAP1-206ENST00000496944 RTF1Q92541 710 aaKnown RBP28.25■■■□□ 2.11
NIPSNAP1-206ENST00000496944 PLSCR1O15162 318 aa28.23■■■□□ 2.11
NIPSNAP1-206ENST00000496944 TMPOP42166 694 aaKnown RBP28.23■■■□□ 2.11
NIPSNAP1-206ENST00000496944 CABP4P57796 275 aa28.23■■■□□ 2.11
NIPSNAP1-206ENST00000496944 PIGBQ92521 554 aa28.22■■■□□ 2.11
NIPSNAP1-206ENST00000496944 LGR6Q9HBX8 967 aa28.22■■■□□ 2.11
NIPSNAP1-206ENST00000496944 CEMIPQ8WUJ3 1361 aa28.22■■■□□ 2.11
NIPSNAP1-206ENST00000496944 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
NIPSNAP1-206ENST00000496944 IL17REQ8NFR9 667 aa28.21■■■□□ 2.11
NIPSNAP1-206ENST00000496944 SLC52A2Q9HAB3 445 aa28.21■■■□□ 2.11
NIPSNAP1-206ENST00000496944 FAM9BQ8IZU0 186 aa28.2■■■□□ 2.1
NIPSNAP1-206ENST00000496944 RIPK4P57078 832 aa28.19■■■□□ 2.1
NIPSNAP1-206ENST00000496944 DEFB132Q7Z7B7 95 aa28.19■■■□□ 2.1
NIPSNAP1-206ENST00000496944 TEFQ10587 303 aa28.18■■■□□ 2.1
NIPSNAP1-206ENST00000496944 SMARCC1Q92922 1105 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms