RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
SNX13-211ENST00000496855 SKIP12755 728 aa10.03□□□□□ -0.8
SNX13-211ENST00000496855 RELBQ01201 579 aa10.03□□□□□ -0.8
SNX13-211ENST00000496855 OXLD1Q5BKU9 147 aa10.03□□□□□ -0.8
SNX13-211ENST00000496855 KDF1Q8NAX2 398 aaPredicted RBP10.03□□□□□ -0.8
SNX13-211ENST00000496855 OSBPL3Q9H4L5 887 aa10.03□□□□□ -0.8
SNX13-211ENST00000496855 USP4Q13107 963 aa10.02□□□□□ -0.81
SNX13-211ENST00000496855 ATP5J2-PTCD1G3V325 749 aa10.01□□□□□ -0.81
SNX13-211ENST00000496855 SPINT1O43278 529 aa10.01□□□□□ -0.81
SNX13-211ENST00000496855 PTGIRP43119 386 aa10.01□□□□□ -0.81
SNX13-211ENST00000496855 SNRPBP14678 240 aaKnown RBP10□□□□□ -0.81
SNX13-211ENST00000496855 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
SNX13-211ENST00000496855 CYP2U1Q7Z449 544 aa10□□□□□ -0.81
SNX13-211ENST00000496855 SIRT1Q96EB6 747 aa10□□□□□ -0.81
SNX13-211ENST00000496855 ZNF395Q9H8N7 513 aaPredicted RBP10□□□□□ -0.81
SNX13-211ENST00000496855 USP17L5A8MUK1 530 aa9.98□□□□□ -0.81
SNX13-211ENST00000496855 LZTS3O60299 673 aaPredicted RBP9.98□□□□□ -0.81
SNX13-211ENST00000496855 ATP9BO43861 1147 aa9.98□□□□□ -0.81
SNX13-211ENST00000496855 EML3Q32P44 896 aa9.98□□□□□ -0.81
SNX13-211ENST00000496855 SOS2Q07890 1332 aaPredicted RBP9.97□□□□□ -0.81
SNX13-211ENST00000496855 NCOA4Q13772 614 aa9.97□□□□□ -0.81
SNX13-211ENST00000496855 ERICH6Q7L0X2 663 aa9.97□□□□□ -0.81
SNX13-211ENST00000496855 INSM2Q96T92 566 aaPredicted RBP9.97□□□□□ -0.81
SNX13-211ENST00000496855 PLEKHM2Q8IWE5 1019 aa9.96□□□□□ -0.82
SNX13-211ENST00000496855 DEPDC4Q8N2C3 294 aa9.96□□□□□ -0.82
SNX13-211ENST00000496855 TFIP11Q9UBB9 837 aaKnown RBP9.96□□□□□ -0.82
SNX13-211ENST00000496855 A0A1W2PRU2 124 aa9.95□□□□□ -0.82
SNX13-211ENST00000496855 TTLL8A6PVC2 850 aa9.95□□□□□ -0.82
SNX13-211ENST00000496855 GNRH1P01148 92 aa9.95□□□□□ -0.82
SNX13-211ENST00000496855 CTSOP43234 321 aaPredicted RBP9.95□□□□□ -0.82
SNX13-211ENST00000496855 USP17L3A6NCW0 530 aa9.94□□□□□ -0.82
SNX13-211ENST00000496855 USP17L4A6NCW7 530 aa9.94□□□□□ -0.82
SNX13-211ENST00000496855 PALM3A6NDB9 673 aaPredicted RBP9.94□□□□□ -0.82
SNX13-211ENST00000496855 USP17L2Q6R6M4 530 aa9.94□□□□□ -0.82
SNX13-211ENST00000496855 USP17L1Q7RTZ2 530 aa9.94□□□□□ -0.82
SNX13-211ENST00000496855 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
SNX13-211ENST00000496855 ARHGEF10LQ9HCE6 1279 aa9.94□□□□□ -0.82
SNX13-211ENST00000496855 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
SNX13-211ENST00000496855 NOD1Q9Y239 953 aa9.94□□□□□ -0.82
SNX13-211ENST00000496855 MAN1A2O60476 641 aa9.93□□□□□ -0.82
SNX13-211ENST00000496855 MAFBQ9Y5Q3 323 aaPredicted RBP9.93□□□□□ -0.82
SNX13-211ENST00000496855 SOBPA7XYQ1 873 aa9.92□□□□□ -0.82
SNX13-211ENST00000496855 MEN1O00255 615 aa9.92□□□□□ -0.82
SNX13-211ENST00000496855 CLN3Q13286 438 aa9.92□□□□□ -0.82
SNX13-211ENST00000496855 RAB6BQ9NRW1 208 aa9.92□□□□□ -0.82
SNX13-211ENST00000496855 DNMT3LQ9UJW3 386 aa9.92□□□□□ -0.82
SNX13-211ENST00000496855 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
SNX13-211ENST00000496855 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
SNX13-211ENST00000496855 RNF217Q8TC41 542 aa9.91□□□□□ -0.82
SNX13-211ENST00000496855 NLRP3Q96P20 1036 aa9.91□□□□□ -0.82
SNX13-211ENST00000496855 PCDHGA11Q9Y5H2 935 aa9.91□□□□□ -0.82
SNX13-211ENST00000496855 ARID3CA6NKF2 412 aa9.9□□□□□ -0.83
SNX13-211ENST00000496855 IL2RAP01589 272 aa9.9□□□□□ -0.83
SNX13-211ENST00000496855 GPC1P35052 558 aa9.9□□□□□ -0.83
SNX13-211ENST00000496855 RNF144AP50876 292 aaPredicted RBP9.9□□□□□ -0.83
SNX13-211ENST00000496855 GTF2IP78347 998 aa9.9□□□□□ -0.83
SNX13-211ENST00000496855 ESCO1Q5FWF5 840 aa9.9□□□□□ -0.83
SNX13-211ENST00000496855 CNKSR1Q969H4 720 aa9.9□□□□□ -0.83
SNX13-211ENST00000496855 ESYT1Q9BSJ8 1104 aa9.9□□□□□ -0.83
SNX13-211ENST00000496855 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
SNX13-211ENST00000496855 SCNN1DP51172 638 aa9.89□□□□□ -0.83
SNX13-211ENST00000496855 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.83
SNX13-211ENST00000496855 TRIM50Q86XT4 487 aa9.89□□□□□ -0.83
SNX13-211ENST00000496855 XAGE2Q96GT9 111 aa9.89□□□□□ -0.83
SNX13-211ENST00000496855 ETNK1Q9HBU6 452 aa9.89□□□□□ -0.83
SNX13-211ENST00000496855 MKRN1Q9UHC7 482 aaKnown RBP9.89□□□□□ -0.83
SNX13-211ENST00000496855 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
SNX13-211ENST00000496855 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
SNX13-211ENST00000496855 GDF10P55107 478 aa9.87□□□□□ -0.83
SNX13-211ENST00000496855 CFAP70Q5T0N1 1121 aa9.87□□□□□ -0.83
SNX13-211ENST00000496855 HRH3Q9Y5N1 445 aa9.87□□□□□ -0.83
SNX13-211ENST00000496855 INHAP05111 366 aa9.86□□□□□ -0.83
SNX13-211ENST00000496855 ATP1A2P50993 1020 aa9.86□□□□□ -0.83
SNX13-211ENST00000496855 PSME1Q06323 249 aa9.86□□□□□ -0.83
SNX13-211ENST00000496855 WASLO00401 505 aaPredicted RBP9.85□□□□□ -0.83
SNX13-211ENST00000496855 CLDN10P78369 228 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 CENPCQ03188 943 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 SLC27A3Q5K4L6 730 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 LYSMD3Q7Z3D4 306 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 GRIP2Q9C0E4 1043 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 TMEM229AB2RXF0 380 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
SNX13-211ENST00000496855 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 OGFOD1Q8N543 542 aa9.85□□□□□ -0.83
SNX13-211ENST00000496855 DNAAF2Q9NVR5 837 aaKnown RBP9.85□□□□□ -0.83
SNX13-211ENST00000496855 ZBTB7BO15156 539 aaPredicted RBP9.84□□□□□ -0.83
SNX13-211ENST00000496855 ZNF775Q96BV0 537 aaPredicted RBP9.84□□□□□ -0.83
SNX13-211ENST00000496855 CCDC97Q96F63 343 aaPredicted RBP9.84□□□□□ -0.83
SNX13-211ENST00000496855 FHDC1Q9C0D6 1143 aaPredicted RBP9.84□□□□□ -0.83
SNX13-211ENST00000496855 SERPINA10Q9UK55 444 aa9.84□□□□□ -0.83
SNX13-211ENST00000496855 KIAA1024Q9UPX6 916 aa9.84□□□□□ -0.83
SNX13-211ENST00000496855 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
SNX13-211ENST00000496855 RASA1P20936 1047 aa9.82□□□□□ -0.84
SNX13-211ENST00000496855 RFX1P22670 979 aa9.82□□□□□ -0.84
SNX13-211ENST00000496855 PTSQ03393 145 aa9.82□□□□□ -0.84
SNX13-211ENST00000496855 CCDC102BQ68D86 513 aa9.82□□□□□ -0.84
SNX13-211ENST00000496855 TPCN2Q8NHX9 752 aa9.82□□□□□ -0.84
SNX13-211ENST00000496855 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
SNX13-211ENST00000496855 C1orf115Q9H7X2 142 aa9.82□□□□□ -0.84
SNX13-211ENST00000496855 VRTNQ9H8Y1 702 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms