RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 CTSOP43234 321 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-210ENST00000496840 ALG2Q9H553 416 aa12.96□□□□□ -0.33
TARDBP-210ENST00000496840 WFS1O76024 890 aa12.95□□□□□ -0.34
TARDBP-210ENST00000496840 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-210ENST00000496840 DOLKQ9UPQ8 538 aa12.95□□□□□ -0.34
TARDBP-210ENST00000496840 MYCP01106 439 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-210ENST00000496840 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
TARDBP-210ENST00000496840 POLMQ9NP87 494 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-210ENST00000496840 MAP7D1Q3KQU3 841 aa12.93□□□□□ -0.34
TARDBP-210ENST00000496840 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
TARDBP-210ENST00000496840 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
TARDBP-210ENST00000496840 FOXD4L5Q5VV16 416 aaPredicted RBP12.92□□□□□ -0.34
TARDBP-210ENST00000496840 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
TARDBP-210ENST00000496840 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
TARDBP-210ENST00000496840 GPC1P35052 558 aa12.91□□□□□ -0.34
TARDBP-210ENST00000496840 USP4Q13107 963 aa12.91□□□□□ -0.34
TARDBP-210ENST00000496840 FNBP4Q8N3X1 1017 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-210ENST00000496840 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
TARDBP-210ENST00000496840 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
TARDBP-210ENST00000496840 A0A1W2PRU2 124 aa12.9□□□□□ -0.34
TARDBP-210ENST00000496840 A6NJR5 290 aa12.9□□□□□ -0.34
TARDBP-210ENST00000496840 H3BM21 787 aa12.9□□□□□ -0.34
TARDBP-210ENST00000496840 GNRH1P01148 92 aa12.9□□□□□ -0.34
TARDBP-210ENST00000496840 RNF144AP50876 292 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-210ENST00000496840 PROSER2Q86WR7 435 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-210ENST00000496840 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
TARDBP-210ENST00000496840 POM121CA8CG34 1229 aa12.89□□□□□ -0.35
TARDBP-210ENST00000496840 CLN3Q13286 438 aa12.89□□□□□ -0.35
TARDBP-210ENST00000496840 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
TARDBP-210ENST00000496840 PTSQ03393 145 aa12.87□□□□□ -0.35
TARDBP-210ENST00000496840 OXLD1Q5BKU9 147 aa12.87□□□□□ -0.35
TARDBP-210ENST00000496840 MEN1O00255 615 aa12.86□□□□□ -0.35
TARDBP-210ENST00000496840 ADAMTS19Q8TE59 1207 aa12.86□□□□□ -0.35
TARDBP-210ENST00000496840 ARHGEF10LQ9HCE6 1279 aa12.86□□□□□ -0.35
TARDBP-210ENST00000496840 PIK3CDO00329 1044 aa12.85□□□□□ -0.35
TARDBP-210ENST00000496840 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
TARDBP-210ENST00000496840 LCE2CQ5TA81 110 aa12.85□□□□□ -0.35
TARDBP-210ENST00000496840 LYSMD3Q7Z3D4 306 aa12.85□□□□□ -0.35
TARDBP-210ENST00000496840 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
TARDBP-210ENST00000496840 LZTS3O60299 673 aaPredicted RBP12.84□□□□□ -0.35
TARDBP-210ENST00000496840 IRF7Q92985 503 aa12.84□□□□□ -0.35
TARDBP-210ENST00000496840 SLC35F4A4IF30 521 aa12.83□□□□□ -0.36
TARDBP-210ENST00000496840 VEGFBP49765 207 aa12.83□□□□□ -0.36
TARDBP-210ENST00000496840 VSIG8P0DPA2 414 aa12.82□□□□□ -0.36
TARDBP-210ENST00000496840 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
TARDBP-210ENST00000496840 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
TARDBP-210ENST00000496840 WIPF1O43516 503 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 IL2RAP01589 272 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 SKIP12755 728 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 XAGE2Q96GT9 111 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 GRIP2Q9C0E4 1043 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 RAB6BQ9NRW1 208 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 HRH3Q9Y5N1 445 aa12.81□□□□□ -0.36
TARDBP-210ENST00000496840 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
TARDBP-210ENST00000496840 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
TARDBP-210ENST00000496840 EML3Q32P44 896 aa12.79□□□□□ -0.36
TARDBP-210ENST00000496840 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
TARDBP-210ENST00000496840 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
TARDBP-210ENST00000496840 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
TARDBP-210ENST00000496840 UCN2Q96RP3 112 aa12.78□□□□□ -0.36
TARDBP-210ENST00000496840 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
TARDBP-210ENST00000496840 SPATA31C2B4DYI2 1134 aa12.77□□□□□ -0.37
TARDBP-210ENST00000496840 GLMNQ92990 594 aa12.77□□□□□ -0.37
TARDBP-210ENST00000496840 USP17L5A8MUK1 530 aa12.76□□□□□ -0.37
TARDBP-210ENST00000496840 CENPCQ03188 943 aa12.76□□□□□ -0.37
TARDBP-210ENST00000496840 WDR44Q5JSH3 913 aa12.76□□□□□ -0.37
TARDBP-210ENST00000496840 ETNK1Q9HBU6 452 aa12.76□□□□□ -0.37
TARDBP-210ENST00000496840 WASLO00401 505 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-210ENST00000496840 NCOA4Q13772 614 aa12.75□□□□□ -0.37
TARDBP-210ENST00000496840 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
TARDBP-210ENST00000496840 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
TARDBP-210ENST00000496840 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-210ENST00000496840 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
TARDBP-210ENST00000496840 ITGA6P23229 1130 aa12.74□□□□□ -0.37
TARDBP-210ENST00000496840 SCNN1DP51172 638 aa12.74□□□□□ -0.37
TARDBP-210ENST00000496840 PCDHGA11Q9Y5H2 935 aa12.74□□□□□ -0.37
TARDBP-210ENST00000496840 ATP9BO43861 1147 aa12.73□□□□□ -0.37
TARDBP-210ENST00000496840 RHOQP17081 205 aa12.73□□□□□ -0.37
TARDBP-210ENST00000496840 GDF10P55107 478 aa12.73□□□□□ -0.37
TARDBP-210ENST00000496840 TBC1D9Q6ZT07 1266 aa12.73□□□□□ -0.37
TARDBP-210ENST00000496840 INHAP05111 366 aa12.72□□□□□ -0.37
TARDBP-210ENST00000496840 GMPRP36959 345 aa12.72□□□□□ -0.37
TARDBP-210ENST00000496840 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
TARDBP-210ENST00000496840 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
TARDBP-210ENST00000496840 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-210ENST00000496840 POU4F2Q12837 409 aa12.71□□□□□ -0.37
TARDBP-210ENST00000496840 TAS1R3Q7RTX0 852 aa12.71□□□□□ -0.37
TARDBP-210ENST00000496840 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
TARDBP-210ENST00000496840 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
TARDBP-210ENST00000496840 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
TARDBP-210ENST00000496840 USP17L2Q6R6M4 530 aa12.7□□□□□ -0.38
TARDBP-210ENST00000496840 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
TARDBP-210ENST00000496840 DYRK1BQ9Y463 629 aa12.7□□□□□ -0.38
TARDBP-210ENST00000496840 GTF2IP78347 998 aa12.69□□□□□ -0.38
TARDBP-210ENST00000496840 DEPDC4Q8N2C3 294 aa12.69□□□□□ -0.38
TARDBP-210ENST00000496840 CALR3Q96L12 384 aaKnown RBP12.69□□□□□ -0.38
TARDBP-210ENST00000496840 TMEM229AB2RXF0 380 aa12.68□□□□□ -0.38
TARDBP-210ENST00000496840 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-210ENST00000496840 TLR1Q15399 786 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms