RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 BTAF1O14981 1849 aa17.13■□□□□ 0.33
VPS72-206ENST00000496809 KIF20BQ96Q89 1820 aa17.13■□□□□ 0.33
VPS72-206ENST00000496809 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
VPS72-206ENST00000496809 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
VPS72-206ENST00000496809 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
VPS72-206ENST00000496809 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
VPS72-206ENST00000496809 MEGF6O75095 1541 aa17.11■□□□□ 0.33
VPS72-206ENST00000496809 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
VPS72-206ENST00000496809 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
VPS72-206ENST00000496809 PTGER2P43116 358 aa17.1■□□□□ 0.33
VPS72-206ENST00000496809 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
VPS72-206ENST00000496809 LRRC4BQ9NT99 713 aa17.1■□□□□ 0.33
VPS72-206ENST00000496809 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
VPS72-206ENST00000496809 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
VPS72-206ENST00000496809 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
VPS72-206ENST00000496809 SLC16A10Q8TF71 515 aa17.09■□□□□ 0.33
VPS72-206ENST00000496809 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
VPS72-206ENST00000496809 MYOM1P52179 1685 aa17.09■□□□□ 0.33
VPS72-206ENST00000496809 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
VPS72-206ENST00000496809 EMILIN1Q9Y6C2 1016 aa17.08■□□□□ 0.32
VPS72-206ENST00000496809 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
VPS72-206ENST00000496809 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
VPS72-206ENST00000496809 WASHC2AQ641Q2 1341 aa17.07■□□□□ 0.32
VPS72-206ENST00000496809 ZNF827Q17R98 1081 aa17.07■□□□□ 0.32
VPS72-206ENST00000496809 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
VPS72-206ENST00000496809 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
VPS72-206ENST00000496809 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
VPS72-206ENST00000496809 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
VPS72-206ENST00000496809 YY1P25490 414 aa17.05■□□□□ 0.32
VPS72-206ENST00000496809 ARXQ96QS3 562 aa17.05■□□□□ 0.32
VPS72-206ENST00000496809 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
VPS72-206ENST00000496809 NSD2O96028 1365 aa17.04■□□□□ 0.32
VPS72-206ENST00000496809 POLD1P28340 1107 aa17.04■□□□□ 0.32
VPS72-206ENST00000496809 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
VPS72-206ENST00000496809 SYT17Q9BSW7 474 aa17.04■□□□□ 0.32
VPS72-206ENST00000496809 FHDC1Q9C0D6 1143 aaPredicted RBP17.04■□□□□ 0.32
VPS72-206ENST00000496809 HSPA5P11021 654 aaKnown RBP17.03■□□□□ 0.32
VPS72-206ENST00000496809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.03■□□□□ 0.325e-8■■■■□ 20
VPS72-206ENST00000496809 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
VPS72-206ENST00000496809 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
VPS72-206ENST00000496809 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
VPS72-206ENST00000496809 CYP27B1O15528 508 aa17.01■□□□□ 0.31
VPS72-206ENST00000496809 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
VPS72-206ENST00000496809 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
VPS72-206ENST00000496809 LY75O60449 1722 aa17■□□□□ 0.31
VPS72-206ENST00000496809 KCNQ4P56696 695 aa17■□□□□ 0.31
VPS72-206ENST00000496809 NCAPD2Q15021 1401 aa17■□□□□ 0.31
VPS72-206ENST00000496809 EYA1Q99502 592 aa17■□□□□ 0.31
VPS72-206ENST00000496809 PANK3Q9H999 370 aa17■□□□□ 0.31
VPS72-206ENST00000496809 MAP3K5Q99683 1374 aa17■□□□□ 0.31
VPS72-206ENST00000496809 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
VPS72-206ENST00000496809 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
VPS72-206ENST00000496809 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
VPS72-206ENST00000496809 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
VPS72-206ENST00000496809 FLAD1Q8NFF5 587 aa16.99■□□□□ 0.31
VPS72-206ENST00000496809 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
VPS72-206ENST00000496809 PALLDQ8WX93 1383 aa16.98■□□□□ 0.31
VPS72-206ENST00000496809 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
VPS72-206ENST00000496809 MSH5O43196 834 aa16.97■□□□□ 0.31
VPS72-206ENST00000496809 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
VPS72-206ENST00000496809 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
VPS72-206ENST00000496809 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
VPS72-206ENST00000496809 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.3
VPS72-206ENST00000496809 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
VPS72-206ENST00000496809 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
VPS72-206ENST00000496809 PIGBQ92521 554 aa16.94■□□□□ 0.3
VPS72-206ENST00000496809 PHKG2P15735 406 aa16.93■□□□□ 0.3
VPS72-206ENST00000496809 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
VPS72-206ENST00000496809 KLHL34Q8N239 644 aa16.93■□□□□ 0.3
VPS72-206ENST00000496809 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
VPS72-206ENST00000496809 AK7Q96M32 723 aa16.92■□□□□ 0.3
VPS72-206ENST00000496809 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
VPS72-206ENST00000496809 GPR162Q16538 588 aa16.91■□□□□ 0.3
VPS72-206ENST00000496809 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
VPS72-206ENST00000496809 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
VPS72-206ENST00000496809 C5P01031 1676 aa16.91■□□□□ 0.3
VPS72-206ENST00000496809 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
VPS72-206ENST00000496809 SIK1P57059 783 aa16.9■□□□□ 0.3
VPS72-206ENST00000496809 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
VPS72-206ENST00000496809 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
VPS72-206ENST00000496809 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
VPS72-206ENST00000496809 ITGB4P16144 1822 aa16.89■□□□□ 0.29
VPS72-206ENST00000496809 TUBGCP6Q96RT7 1819 aa16.89■□□□□ 0.29
VPS72-206ENST00000496809 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
VPS72-206ENST00000496809 SSFA2P28290 1259 aa16.87■□□□□ 0.29
VPS72-206ENST00000496809 ATP6V1AP38606 617 aa16.86■□□□□ 0.29
VPS72-206ENST00000496809 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
VPS72-206ENST00000496809 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
VPS72-206ENST00000496809 C4BP0C0L5 1744 aa16.86■□□□□ 0.29
VPS72-206ENST00000496809 TAF1LQ8IZX4 1826 aa16.85■□□□□ 0.29
VPS72-206ENST00000496809 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
VPS72-206ENST00000496809 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
VPS72-206ENST00000496809 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
VPS72-206ENST00000496809 CD2APQ9Y5K6 639 aa16.85■□□□□ 0.29
VPS72-206ENST00000496809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
VPS72-206ENST00000496809 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
VPS72-206ENST00000496809 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
VPS72-206ENST00000496809 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
VPS72-206ENST00000496809 PHF14O94880 888 aa16.83■□□□□ 0.28
VPS72-206ENST00000496809 MTHFSP49914 203 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms