RNA–Protein interactions for RNA: ENST00000496742.5

SSR2-213, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3 BASIC

Gene SSR2, Length 825 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-213ENST00000496742 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
SSR2-213ENST00000496742 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 USHBP1Q8N6Y0 703 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
SSR2-213ENST00000496742 CLUAP1Q96AJ1 413 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 NOB1Q9ULX3 412 aaKnown RBP12.34□□□□□ -0.43
SSR2-213ENST00000496742 CRB1P82279 1406 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
SSR2-213ENST00000496742 PXDNQ92626 1479 aa12.34□□□□□ -0.43
SSR2-213ENST00000496742 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
SSR2-213ENST00000496742 MAP3K5Q99683 1374 aa12.33□□□□□ -0.44
SSR2-213ENST00000496742 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
SSR2-213ENST00000496742 BRINP3Q76B58 766 aa12.33□□□□□ -0.44
SSR2-213ENST00000496742 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
SSR2-213ENST00000496742 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
SSR2-213ENST00000496742 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
SSR2-213ENST00000496742 RLBP1P12271 317 aa12.32□□□□□ -0.44
SSR2-213ENST00000496742 ZC3H6P61129 1189 aaKnown RBP12.32□□□□□ -0.44
SSR2-213ENST00000496742 TSPYL6Q8N831 410 aa12.32□□□□□ -0.44
SSR2-213ENST00000496742 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
SSR2-213ENST00000496742 TNNQ9UQP3 1299 aa12.32□□□□□ -0.44
SSR2-213ENST00000496742 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
SSR2-213ENST00000496742 RGPD5Q99666 1765 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
SSR2-213ENST00000496742 TCERG1O14776 1098 aaKnown RBP12.31□□□□□ -0.44
SSR2-213ENST00000496742 TRIM27P14373 513 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
SSR2-213ENST00000496742 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
SSR2-213ENST00000496742 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 LRRC59Q96AG4 307 aaKnown RBP12.31□□□□□ -0.44
SSR2-213ENST00000496742 TSPYL4Q9UJ04 414 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 ABCC6O95255 1503 aa12.31□□□□□ -0.44
SSR2-213ENST00000496742 CAMTA1Q9Y6Y1 1673 aa12.3□□□□□ -0.44
SSR2-213ENST00000496742 ITPRIPQ8IWB1 547 aa12.3□□□□□ -0.44
SSR2-213ENST00000496742 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
SSR2-213ENST00000496742 API5Q9BZZ5 524 aaKnown RBP12.29□□□□□ -0.44
SSR2-213ENST00000496742 CHMP4BQ9H444 224 aaKnown RBP12.29□□□□□ -0.44
SSR2-213ENST00000496742 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
SSR2-213ENST00000496742 CRYBG1Q9Y4K1 1723 aa12.28□□□□□ -0.44
SSR2-213ENST00000496742 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
SSR2-213ENST00000496742 C1orf141Q5JVX7 400 aa12.28□□□□□ -0.44
SSR2-213ENST00000496742 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
SSR2-213ENST00000496742 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
SSR2-213ENST00000496742 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
SSR2-213ENST00000496742 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
SSR2-213ENST00000496742 ERBB3P21860 1342 aa12.28□□□□□ -0.44
SSR2-213ENST00000496742 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
SSR2-213ENST00000496742 FAM208AQ9UK61 1670 aaKnown RBP12.28□□□□□ -0.44
SSR2-213ENST00000496742 LMO7Q8WWI1 1683 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 CSB-PGBD3P0DP91 1061 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 TAF7Q15545 349 aaPredicted RBP12.27□□□□□ -0.45
SSR2-213ENST00000496742 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 IL17REQ8NFR9 667 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 RWDD1Q9H446 243 aaPredicted RBP12.27□□□□□ -0.45
SSR2-213ENST00000496742 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 COL18A1P39060 1754 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 CPDO75976 1380 aa12.27□□□□□ -0.45
SSR2-213ENST00000496742 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
SSR2-213ENST00000496742 SOS1Q07889 1333 aaPredicted RBP12.26□□□□□ -0.45
SSR2-213ENST00000496742 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
SSR2-213ENST00000496742 NHSL1Q5SYE7 1610 aa12.25□□□□□ -0.45
SSR2-213ENST00000496742 OVOS2A0A0G2JMS6 1433 aa12.24□□□□□ -0.45
SSR2-213ENST00000496742 IGHDP01880 384 aa12.24□□□□□ -0.45
SSR2-213ENST00000496742 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
SSR2-213ENST00000496742 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
SSR2-213ENST00000496742 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
SSR2-213ENST00000496742 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
SSR2-213ENST00000496742 PLEKHG2Q9H7P9 1386 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 ABCC4O15439 1325 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 PTPRCP08575 1304 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 TEFQ10587 303 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
SSR2-213ENST00000496742 VIRMAQ69YN4 1812 aaKnown RBP12.23□□□□□ -0.45
SSR2-213ENST00000496742 RNMTO43148 476 aaKnown RBP12.22□□□□□ -0.45
SSR2-213ENST00000496742 CCDC30Q5VVM6 783 aa12.22□□□□□ -0.45
SSR2-213ENST00000496742 SPG7Q9UQ90 795 aa12.22□□□□□ -0.45
SSR2-213ENST00000496742 KDM3BQ7LBC6 1761 aa12.21□□□□□ -0.45
SSR2-213ENST00000496742 ABCA3Q99758 1704 aa12.21□□□□□ -0.45
SSR2-213ENST00000496742 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
SSR2-213ENST00000496742 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
SSR2-213ENST00000496742 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
SSR2-213ENST00000496742 ZBTB40Q9NUA8 1239 aa12.21□□□□□ -0.45
SSR2-213ENST00000496742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
SSR2-213ENST00000496742 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
SSR2-213ENST00000496742 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
SSR2-213ENST00000496742 RGS3P49796 1198 aa12.19□□□□□ -0.46
SSR2-213ENST00000496742 INTS3Q68E01 1043 aaKnown RBP12.19□□□□□ -0.46
SSR2-213ENST00000496742 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
SSR2-213ENST00000496742 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
SSR2-213ENST00000496742 HOXB7P09629 217 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms