RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 BCL9O00512 1426 aa10.96□□□□□ -0.65
SMARCD3-215ENST00000496530 PARD3Q8TEW0 1356 aa10.96□□□□□ -0.65
SMARCD3-215ENST00000496530 PCDH11XQ9BZA7 1347 aa10.96□□□□□ -0.65
SMARCD3-215ENST00000496530 PCDH11YQ9BZA8 1340 aa10.96□□□□□ -0.65
SMARCD3-215ENST00000496530 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
SMARCD3-215ENST00000496530 MARCH10Q8NA82 808 aaPredicted RBP10.96□□□□□ -0.65
SMARCD3-215ENST00000496530 PRKRIP1Q9H875 184 aaPredicted RBP10.96□□□□□ -0.65
SMARCD3-215ENST00000496530 EIF4A2Q14240 407 aaKnown RBP10.95□□□□□ -0.66
SMARCD3-215ENST00000496530 DEFB132Q7Z7B7 95 aa10.95□□□□□ -0.66
SMARCD3-215ENST00000496530 CFAP53Q96M91 514 aa10.95□□□□□ -0.66
SMARCD3-215ENST00000496530 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
SMARCD3-215ENST00000496530 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
SMARCD3-215ENST00000496530 SBF2Q86WG5 1849 aa10.95□□□□□ -0.66
SMARCD3-215ENST00000496530 PLEKHG2Q9H7P9 1386 aa10.94□□□□□ -0.66
SMARCD3-215ENST00000496530 MTHFSP49914 203 aa10.94□□□□□ -0.66
SMARCD3-215ENST00000496530 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
SMARCD3-215ENST00000496530 EYA1Q99502 592 aa10.94□□□□□ -0.66
SMARCD3-215ENST00000496530 MEGF6O75095 1541 aa10.94□□□□□ -0.66
SMARCD3-215ENST00000496530 PPP2R1AP30153 589 aa10.93□□□□□ -0.66
SMARCD3-215ENST00000496530 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
SMARCD3-215ENST00000496530 NHSQ6T4R5 1651 aa10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 PLSCR1O15162 318 aa10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 DIAPH1O60610 1272 aaKnown RBP10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 HMGB2P26583 209 aaKnown RBP10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 SYTL4Q96C24 671 aaPredicted RBP10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 ACSBG1Q96GR2 724 aa10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 RGPD3A6NKT7 1758 aaPredicted RBP10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 RGPD4Q7Z3J3 1758 aa10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 NCAPD2Q15021 1401 aa10.92□□□□□ -0.66
SMARCD3-215ENST00000496530 IGSF1Q8N6C5 1336 aa10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 EZH2Q15910 746 aaKnown RBP10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 AMOTQ4VCS5 1084 aa10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 PLEKHO1Q53GL0 409 aaPredicted RBP10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 MRS2Q9HD23 443 aa10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 NUDCQ9Y266 331 aa10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 PKD1L3Q7Z443 1732 aa10.91□□□□□ -0.66
SMARCD3-215ENST00000496530 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.66
SMARCD3-215ENST00000496530 IFNL2Q8IZJ0 200 aa10.9□□□□□ -0.66
SMARCD3-215ENST00000496530 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
SMARCD3-215ENST00000496530 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
SMARCD3-215ENST00000496530 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 SHANK3Q9BYB0 1731 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 KAT6BQ8WYB5 2073 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 MYBBP1AQ9BQG0 1328 aaKnown RBP10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 IL13P35225 146 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 CCDC184Q52MB2 194 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 C1orf141Q5JVX7 400 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 SULT6B1Q6IMI4 303 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 RREB1Q92766 1687 aa10.89□□□□□ -0.67
SMARCD3-215ENST00000496530 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
SMARCD3-215ENST00000496530 BTAF1O14981 1849 aa10.87□□□□□ -0.67
SMARCD3-215ENST00000496530 KCNQ2O43526 872 aa10.87□□□□□ -0.67
SMARCD3-215ENST00000496530 NEFMP07197 916 aa10.87□□□□□ -0.67
SMARCD3-215ENST00000496530 PRIM1P49642 420 aaKnown RBP10.87□□□□□ -0.67
SMARCD3-215ENST00000496530 CCER2I3L3R5 266 aa10.86□□□□□ -0.67
SMARCD3-215ENST00000496530 PHKG2P15735 406 aa10.86□□□□□ -0.67
SMARCD3-215ENST00000496530 WDR43Q15061 677 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMARCD3-215ENST00000496530 ZNF530Q6P9A1 599 aaPredicted RBP10.86□□□□□ -0.67
SMARCD3-215ENST00000496530 NUP188Q5SRE5 1749 aa10.86□□□□□ -0.67
SMARCD3-215ENST00000496530 CYP27B1O15528 508 aa10.85□□□□□ -0.67
SMARCD3-215ENST00000496530 HMOX1P09601 288 aa10.85□□□□□ -0.67
SMARCD3-215ENST00000496530 TXNRD1Q16881 649 aa10.85□□□□□ -0.67
SMARCD3-215ENST00000496530 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
SMARCD3-215ENST00000496530 SMARCC1Q92922 1105 aaPredicted RBP10.85□□□□□ -0.67
SMARCD3-215ENST00000496530 TMOD3Q9NYL9 352 aa10.85□□□□□ -0.67
SMARCD3-215ENST00000496530 KDRP35968 1356 aa10.85□□□□□ -0.67
SMARCD3-215ENST00000496530 SENP3-EIF4A1A0A087X0R7 540 aa10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 NKX1-1Q15270 411 aaPredicted RBP10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 MPRIPQ6WCQ1 1025 aa10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 AEBP1Q8IUX7 1158 aa10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 DCAF5Q96JK2 942 aa10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 YTHDC1Q96MU7 727 aaKnown RBP10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 PNNQ9H307 717 aaKnown RBP10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 STK32BQ9NY57 414 aa10.84□□□□□ -0.67
SMARCD3-215ENST00000496530 U2AF1L5P0DN76 240 aaPredicted RBP10.83□□□□□ -0.68
SMARCD3-215ENST00000496530 U2AF1Q01081 240 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMARCD3-215ENST00000496530 R3HDM1Q15032 1099 aaKnown RBP10.83□□□□□ -0.68
SMARCD3-215ENST00000496530 AKAP4Q5JQC9 854 aa10.83□□□□□ -0.68
SMARCD3-215ENST00000496530 COL3A1P02461 1466 aaPredicted RBP10.82□□□□□ -0.68
SMARCD3-215ENST00000496530 ITGB4P16144 1822 aa10.82□□□□□ -0.68
SMARCD3-215ENST00000496530 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
SMARCD3-215ENST00000496530 ERVV-2B6SEH9 535 aa10.82□□□□□ -0.68
SMARCD3-215ENST00000496530 PTF1AQ7RTS3 328 aa10.82□□□□□ -0.68
SMARCD3-215ENST00000496530 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
SMARCD3-215ENST00000496530 CABP4P57796 275 aa10.81□□□□□ -0.68
SMARCD3-215ENST00000496530 CCNL1Q9UK58 526 aaPredicted RBP10.81□□□□□ -0.68
SMARCD3-215ENST00000496530 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
SMARCD3-215ENST00000496530 SALL2Q9Y467 1007 aaPredicted RBP10.81□□□□□ -0.68
SMARCD3-215ENST00000496530 EP400Q96L91 3159 aa10.81□□□□□ -0.68
SMARCD3-215ENST00000496530 LY75O60449 1722 aa10.81□□□□□ -0.68
SMARCD3-215ENST00000496530 PALLDQ8WX93 1383 aa10.8□□□□□ -0.68
SMARCD3-215ENST00000496530 FCHSD2O94868 740 aa10.8□□□□□ -0.68
SMARCD3-215ENST00000496530 PNISRQ8TF01 805 aaKnown RBP10.8□□□□□ -0.68
SMARCD3-215ENST00000496530 TOGARAM1Q9Y4F4 1720 aa10.8□□□□□ -0.68
SMARCD3-215ENST00000496530 PRKAR2BP31323 418 aa10.79□□□□□ -0.68
SMARCD3-215ENST00000496530 SLC15A2Q16348 729 aa10.79□□□□□ -0.68
SMARCD3-215ENST00000496530 CCDC146Q8IYE0 955 aa10.79□□□□□ -0.68
SMARCD3-215ENST00000496530 PIGBQ92521 554 aa10.79□□□□□ -0.68
SMARCD3-215ENST00000496530 MTHFSDQ2M296 383 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms