RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
HDAC9-226ENST00000496026 MRS2Q9HD23 443 aa19.67■□□□□ 0.74
HDAC9-226ENST00000496026 SPG7Q9UQ90 795 aa19.67■□□□□ 0.74
HDAC9-226ENST00000496026 WNK3Q9BYP7 1800 aa19.67■□□□□ 0.74
HDAC9-226ENST00000496026 TNS2Q63HR2 1409 aa19.67■□□□□ 0.74
HDAC9-226ENST00000496026 PARP4Q9UKK3 1724 aaKnown RBP19.66■□□□□ 0.74
HDAC9-226ENST00000496026 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
HDAC9-226ENST00000496026 DDX54Q8TDD1 881 aaKnown RBP19.66■□□□□ 0.74
HDAC9-226ENST00000496026 LRRC37A3O60309 1634 aa19.65■□□□□ 0.74
HDAC9-226ENST00000496026 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
HDAC9-226ENST00000496026 FCHSD2O94868 740 aa19.64■□□□□ 0.73
HDAC9-226ENST00000496026 FAM182BQ5T319 152 aa19.64■□□□□ 0.73
HDAC9-226ENST00000496026 RSPH6AQ9H0K4 717 aa19.64■□□□□ 0.73
HDAC9-226ENST00000496026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.73
HDAC9-226ENST00000496026 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
HDAC9-226ENST00000496026 AMOTQ4VCS5 1084 aa19.63■□□□□ 0.73
HDAC9-226ENST00000496026 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
HDAC9-226ENST00000496026 PCDH11XQ9BZA7 1347 aa19.62■□□□□ 0.73
HDAC9-226ENST00000496026 PCDH11YQ9BZA8 1340 aa19.62■□□□□ 0.73
HDAC9-226ENST00000496026 MARCH10Q8NA82 808 aaPredicted RBP19.62■□□□□ 0.73
HDAC9-226ENST00000496026 PNNQ9H307 717 aaKnown RBP19.62■□□□□ 0.73
HDAC9-226ENST00000496026 NEFMP07197 916 aa19.61■□□□□ 0.73
HDAC9-226ENST00000496026 BRWD3Q6RI45 1802 aa19.6■□□□□ 0.73
HDAC9-226ENST00000496026 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
HDAC9-226ENST00000496026 FAM196AQ6ZSG2 479 aa19.59■□□□□ 0.73
HDAC9-226ENST00000496026 MIER1Q8N108 512 aa19.59■□□□□ 0.73
HDAC9-226ENST00000496026 ADAMTS8Q9UP79 889 aa19.59■□□□□ 0.73
HDAC9-226ENST00000496026 CYP27B1O15528 508 aa19.58■□□□□ 0.72
HDAC9-226ENST00000496026 C1orf141Q5JVX7 400 aa19.58■□□□□ 0.72
HDAC9-226ENST00000496026 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.72
HDAC9-226ENST00000496026 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
HDAC9-226ENST00000496026 PHACTR3Q96KR7 559 aa19.57■□□□□ 0.72
HDAC9-226ENST00000496026 MAPK8IP3Q9UPT6 1336 aa19.56■□□□□ 0.72
HDAC9-226ENST00000496026 PHKG2P15735 406 aa19.56■□□□□ 0.72
HDAC9-226ENST00000496026 MTHFSDQ2M296 383 aaKnown RBP19.56■□□□□ 0.72
HDAC9-226ENST00000496026 GAS2L2Q8NHY3 880 aa19.56■□□□□ 0.72
HDAC9-226ENST00000496026 PNISRQ8TF01 805 aaKnown RBP19.56■□□□□ 0.72
HDAC9-226ENST00000496026 PKD1L3Q7Z443 1732 aa19.56■□□□□ 0.72
HDAC9-226ENST00000496026 CCDC146Q8IYE0 955 aa19.55■□□□□ 0.72
HDAC9-226ENST00000496026 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
HDAC9-226ENST00000496026 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
HDAC9-226ENST00000496026 HSP90AB1P08238 724 aaKnown RBP19.53■□□□□ 0.72
HDAC9-226ENST00000496026 ACSBG1Q96GR2 724 aa19.53■□□□□ 0.72
HDAC9-226ENST00000496026 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.72
HDAC9-226ENST00000496026 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.72
HDAC9-226ENST00000496026 FAM9BQ8IZU0 186 aa19.52■□□□□ 0.72
HDAC9-226ENST00000496026 RUNDC1Q96C34 613 aa19.52■□□□□ 0.72
HDAC9-226ENST00000496026 BCL9O00512 1426 aa19.51■□□□□ 0.71
HDAC9-226ENST00000496026 TRIM37O94972 964 aa19.51■□□□□ 0.71
HDAC9-226ENST00000496026 SYTL4Q96C24 671 aaPredicted RBP19.5■□□□□ 0.71
HDAC9-226ENST00000496026 DCAF5Q96JK2 942 aa19.5■□□□□ 0.71
HDAC9-226ENST00000496026 MAP3K5Q99683 1374 aa19.49■□□□□ 0.71
HDAC9-226ENST00000496026 GNAT3A8MTJ3 354 aa19.49■□□□□ 0.71
HDAC9-226ENST00000496026 SF3B2Q13435 895 aaKnown RBP19.49■□□□□ 0.71
HDAC9-226ENST00000496026 MPRIPQ6WCQ1 1025 aa19.49■□□□□ 0.71
HDAC9-226ENST00000496026 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
HDAC9-226ENST00000496026 NFE2L2Q16236 605 aa19.48■□□□□ 0.71
HDAC9-226ENST00000496026 KCNQ2O43526 872 aa19.47■□□□□ 0.71
HDAC9-226ENST00000496026 RTF1Q92541 710 aaKnown RBP19.47■□□□□ 0.71
HDAC9-226ENST00000496026 BCL11BQ9C0K0 894 aaPredicted RBP19.47■□□□□ 0.71
HDAC9-226ENST00000496026 CCDC125Q86Z20 511 aa19.46■□□□□ 0.71
HDAC9-226ENST00000496026 UPF1Q92900 1129 aaKnown RBP eCLIP19.46■□□□□ 0.71
HDAC9-226ENST00000496026 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
HDAC9-226ENST00000496026 ERVV-2B6SEH9 535 aa19.45■□□□□ 0.7
HDAC9-226ENST00000496026 RNMTO43148 476 aaKnown RBP19.45■□□□□ 0.7
HDAC9-226ENST00000496026 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
HDAC9-226ENST00000496026 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
HDAC9-226ENST00000496026 LGR6Q9HBX8 967 aa19.45■□□□□ 0.7
HDAC9-226ENST00000496026 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
HDAC9-226ENST00000496026 APAF1O14727 1248 aa19.44■□□□□ 0.7
HDAC9-226ENST00000496026 RIPK4P57078 832 aa19.44■□□□□ 0.7
HDAC9-226ENST00000496026 CABP4P57796 275 aa19.44■□□□□ 0.7
HDAC9-226ENST00000496026 PTF1AQ7RTS3 328 aa19.44■□□□□ 0.7
HDAC9-226ENST00000496026 TMOD3Q9NYL9 352 aa19.44■□□□□ 0.7
HDAC9-226ENST00000496026 HTATSF1O43719 755 aaKnown RBP19.43■□□□□ 0.7
HDAC9-226ENST00000496026 APBA3O96018 575 aa19.43■□□□□ 0.7
HDAC9-226ENST00000496026 DOT1LQ8TEK3 1739 aa19.42■□□□□ 0.7
HDAC9-226ENST00000496026 LMOD3Q0VAK6 560 aa19.42■□□□□ 0.7
HDAC9-226ENST00000496026 MCM10Q7L590 875 aa19.42■□□□□ 0.7
HDAC9-226ENST00000496026 NHSQ6T4R5 1651 aa19.41■□□□□ 0.7
HDAC9-226ENST00000496026 IL17REQ8NFR9 667 aa19.41■□□□□ 0.7
HDAC9-226ENST00000496026 BAG6P46379 1132 aa19.4■□□□□ 0.7
HDAC9-226ENST00000496026 TEFQ10587 303 aa19.4■□□□□ 0.7
HDAC9-226ENST00000496026 DCTN1Q14203 1278 aa19.4■□□□□ 0.7
HDAC9-226ENST00000496026 NFATC2IPQ8NCF5 419 aa19.4■□□□□ 0.7
HDAC9-226ENST00000496026 PIGBQ92521 554 aa19.4■□□□□ 0.7
HDAC9-226ENST00000496026 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
HDAC9-226ENST00000496026 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
HDAC9-226ENST00000496026 SOCS7O14512 581 aa19.39■□□□□ 0.69
HDAC9-226ENST00000496026 TOGARAM1Q9Y4F4 1720 aa19.39■□□□□ 0.69
HDAC9-226ENST00000496026 SBF2Q86WG5 1849 aa19.38■□□□□ 0.69
HDAC9-226ENST00000496026 CEMIPQ8WUJ3 1361 aa19.37■□□□□ 0.69
HDAC9-226ENST00000496026 DEFB132Q7Z7B7 95 aa19.36■□□□□ 0.69
HDAC9-226ENST00000496026 THUMPD2Q9BTF0 503 aaKnown RBP19.36■□□□□ 0.69
HDAC9-226ENST00000496026 TNS1Q9HBL0 1735 aaKnown RBP19.35■□□□□ 0.69
HDAC9-226ENST00000496026 PLSCR1O15162 318 aa19.35■□□□□ 0.69
HDAC9-226ENST00000496026 EN1Q05925 392 aaPredicted RBP19.35■□□□□ 0.69
HDAC9-226ENST00000496026 SMARCC1Q92922 1105 aaPredicted RBP19.35■□□□□ 0.69
HDAC9-226ENST00000496026 ASAP1Q9ULH1 1129 aa19.35■□□□□ 0.69
HDAC9-226ENST00000496026 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms