RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 SPON1Q9HCB6 807 aa18.78■□□□□ 0.6
ABCD4-217ENST00000496015 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.6
ABCD4-217ENST00000496015 MEGF6O75095 1541 aa18.76■□□□□ 0.59
ABCD4-217ENST00000496015 USHBP1Q8N6Y0 703 aa18.76■□□□□ 0.59
ABCD4-217ENST00000496015 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
ABCD4-217ENST00000496015 ANKRD26Q9UPS8 1709 aa18.76■□□□□ 0.59
ABCD4-217ENST00000496015 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
ABCD4-217ENST00000496015 PANK3Q9H999 370 aa18.75■□□□□ 0.59
ABCD4-217ENST00000496015 ANO8Q9HCE9 1232 aaPredicted RBP18.75■□□□□ 0.59
ABCD4-217ENST00000496015 PPP1R1BQ9UD71 204 aaPredicted RBP18.75■□□□□ 0.59
ABCD4-217ENST00000496015 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
ABCD4-217ENST00000496015 WASHC2AQ641Q2 1341 aa18.74■□□□□ 0.59
ABCD4-217ENST00000496015 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
ABCD4-217ENST00000496015 SLC15A2Q16348 729 aa18.73■□□□□ 0.59
ABCD4-217ENST00000496015 DOT1LQ8TEK3 1739 aa18.73■□□□□ 0.59
ABCD4-217ENST00000496015 CASZ1Q86V15 1759 aa18.72■□□□□ 0.59
ABCD4-217ENST00000496015 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
ABCD4-217ENST00000496015 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
ABCD4-217ENST00000496015 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
ABCD4-217ENST00000496015 SLC27A3Q5K4L6 730 aa18.71■□□□□ 0.59
ABCD4-217ENST00000496015 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
ABCD4-217ENST00000496015 NSD2O96028 1365 aa18.7■□□□□ 0.58
ABCD4-217ENST00000496015 KNSTRNQ9Y448 316 aa18.68■□□□□ 0.58
ABCD4-217ENST00000496015 ZBTB7AO95365 584 aa18.67■□□□□ 0.58
ABCD4-217ENST00000496015 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
ABCD4-217ENST00000496015 HMGB2P26583 209 aaKnown RBP18.66■□□□□ 0.58
ABCD4-217ENST00000496015 MORC1Q86VD1 984 aa18.66■□□□□ 0.58
ABCD4-217ENST00000496015 EYA1Q99502 592 aa18.66■□□□□ 0.58
ABCD4-217ENST00000496015 PAPPAQ13219 1627 aa18.66■□□□□ 0.58
ABCD4-217ENST00000496015 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
ABCD4-217ENST00000496015 LRRC4BQ9NT99 713 aa18.65■□□□□ 0.58
ABCD4-217ENST00000496015 LY75O60449 1722 aa18.65■□□□□ 0.58
ABCD4-217ENST00000496015 PKD1L3Q7Z443 1732 aa18.65■□□□□ 0.58
ABCD4-217ENST00000496015 NCAPD2Q15021 1401 aa18.65■□□□□ 0.58
ABCD4-217ENST00000496015 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
ABCD4-217ENST00000496015 MTFR1LQ9H019 292 aa18.64■□□□□ 0.57
ABCD4-217ENST00000496015 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
ABCD4-217ENST00000496015 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
ABCD4-217ENST00000496015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.57
ABCD4-217ENST00000496015 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
ABCD4-217ENST00000496015 CYP27B1O15528 508 aa18.62■□□□□ 0.57
ABCD4-217ENST00000496015 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
ABCD4-217ENST00000496015 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
ABCD4-217ENST00000496015 ITGB4P16144 1822 aa18.61■□□□□ 0.57
ABCD4-217ENST00000496015 ZNF827Q17R98 1081 aa18.61■□□□□ 0.57
ABCD4-217ENST00000496015 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
ABCD4-217ENST00000496015 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
ABCD4-217ENST00000496015 QSER1Q2KHR3 1735 aa18.6■□□□□ 0.57
ABCD4-217ENST00000496015 PLEKHG2Q9H7P9 1386 aa18.59■□□□□ 0.57
ABCD4-217ENST00000496015 PTGER2P43116 358 aa18.59■□□□□ 0.57
ABCD4-217ENST00000496015 KCNQ4P56696 695 aa18.59■□□□□ 0.57
ABCD4-217ENST00000496015 NKX1-1Q15270 411 aaPredicted RBP18.59■□□□□ 0.57
ABCD4-217ENST00000496015 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
ABCD4-217ENST00000496015 IFNL2Q8IZJ0 200 aa18.58■□□□□ 0.56
ABCD4-217ENST00000496015 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
ABCD4-217ENST00000496015 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
ABCD4-217ENST00000496015 PALLDQ8WX93 1383 aa18.56■□□□□ 0.56
ABCD4-217ENST00000496015 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
ABCD4-217ENST00000496015 TOGARAM1Q9Y4F4 1720 aa18.56■□□□□ 0.56
ABCD4-217ENST00000496015 PHKG2P15735 406 aa18.55■□□□□ 0.56
ABCD4-217ENST00000496015 TMOD3Q9NYL9 352 aa18.55■□□□□ 0.56
ABCD4-217ENST00000496015 C5P01031 1676 aa18.54■□□□□ 0.56
ABCD4-217ENST00000496015 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
ABCD4-217ENST00000496015 POLD1P28340 1107 aa18.54■□□□□ 0.56
ABCD4-217ENST00000496015 PLEKHO1Q53GL0 409 aaPredicted RBP18.54■□□□□ 0.56
ABCD4-217ENST00000496015 PIGBQ92521 554 aa18.54■□□□□ 0.56
ABCD4-217ENST00000496015 ARXQ96QS3 562 aa18.54■□□□□ 0.56
ABCD4-217ENST00000496015 PNPLA7Q6ZV29 1317 aa18.53■□□□□ 0.56
ABCD4-217ENST00000496015 MSH5O43196 834 aa18.53■□□□□ 0.56
ABCD4-217ENST00000496015 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
ABCD4-217ENST00000496015 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
ABCD4-217ENST00000496015 TAF1LQ8IZX4 1826 aa18.53■□□□□ 0.56
ABCD4-217ENST00000496015 SGIP1Q9BQI5 828 aa18.52■□□□□ 0.56
ABCD4-217ENST00000496015 FLAD1Q8NFF5 587 aa18.51■□□□□ 0.55
ABCD4-217ENST00000496015 FHDC1Q9C0D6 1143 aaPredicted RBP18.51■□□□□ 0.55
ABCD4-217ENST00000496015 PER1O15534 1290 aaPredicted RBP18.5■□□□□ 0.55
ABCD4-217ENST00000496015 SYT17Q9BSW7 474 aa18.5■□□□□ 0.55
ABCD4-217ENST00000496015 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
ABCD4-217ENST00000496015 MTHFSP49914 203 aa18.49■□□□□ 0.55
ABCD4-217ENST00000496015 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
ABCD4-217ENST00000496015 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
ABCD4-217ENST00000496015 SULT6B1Q6IMI4 303 aa18.49■□□□□ 0.55
ABCD4-217ENST00000496015 ZNF530Q6P9A1 599 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-217ENST00000496015 DCAF5Q96JK2 942 aa18.49■□□□□ 0.55
ABCD4-217ENST00000496015 AK7Q96M32 723 aa18.49■□□□□ 0.55
ABCD4-217ENST00000496015 IL13P35225 146 aa18.48■□□□□ 0.55
ABCD4-217ENST00000496015 C4BP0C0L5 1744 aa18.47■□□□□ 0.55
ABCD4-217ENST00000496015 COL24A1Q17RW2 1714 aa18.47■□□□□ 0.55
ABCD4-217ENST00000496015 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
ABCD4-217ENST00000496015 SIK1P57059 783 aa18.47■□□□□ 0.55
ABCD4-217ENST00000496015 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
ABCD4-217ENST00000496015 MAP3K5Q99683 1374 aa18.46■□□□□ 0.55
ABCD4-217ENST00000496015 NPC1L1Q9UHC9 1359 aa18.46■□□□□ 0.55
ABCD4-217ENST00000496015 AEBP1Q8IUX7 1158 aa18.46■□□□□ 0.55
ABCD4-217ENST00000496015 ASAP1Q9ULH1 1129 aa18.46■□□□□ 0.55
ABCD4-217ENST00000496015 KDRP35968 1356 aa18.45■□□□□ 0.54
ABCD4-217ENST00000496015 CABP4P57796 275 aa18.45■□□□□ 0.54
ABCD4-217ENST00000496015 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
ABCD4-217ENST00000496015 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
ABCD4-217ENST00000496015 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms