RNA–Protein interactions for RNA: ENST00000495517.5

RBM41-208, Transcript of RNA binding motif protein 41, human

TSL 2

Gene RBM41, Length 3,315 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM41-208	ENST00000495517	MSH5	O43196	834 aa		9.16	□□□□□ -0.94
RBM41-208	ENST00000495517	PXDNL	A1KZ92	1463 aa		9.16	□□□□□ -0.94
RBM41-208	ENST00000495517	LY75	O60449	1722 aa		9.16	□□□□□ -0.94
RBM41-208	ENST00000495517	TMC1	Q8TDI8	760 aa		9.16	□□□□□ -0.94
RBM41-208	ENST00000495517	KIAA0232	Q92628	1395 aa		9.16	□□□□□ -0.94
RBM41-208	ENST00000495517	SBF2	Q86WG5	1849 aa		9.15	□□□□□ -0.94
RBM41-208	ENST00000495517	CRB1	P82279	1406 aa		9.15	□□□□□ -0.94
RBM41-208	ENST00000495517	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.15	□□□□□ -0.94
RBM41-208	ENST00000495517	RGS12	O14924	1447 aa		9.15	□□□□□ -0.95
RBM41-208	ENST00000495517	ATF3	P18847	181 aa		9.15	□□□□□ -0.95
RBM41-208	ENST00000495517	AAMP	Q13685	434 aa		9.15	□□□□□ -0.95
RBM41-208	ENST00000495517	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	9.14	□□□□□ -0.95
RBM41-208	ENST00000495517	ZNF853	P0CG23	659 aa		9.14	□□□□□ -0.95
RBM41-208	ENST00000495517	HS6ST3	Q8IZP7	471 aa		9.14	□□□□□ -0.95
RBM41-208	ENST00000495517	NUDC	Q9Y266	331 aa		9.14	□□□□□ -0.95
RBM41-208	ENST00000495517	MTHFS	P49914	203 aa		9.14	□□□□□ -0.95
RBM41-208	ENST00000495517	COL24A1	Q17RW2	1714 aa		9.14	□□□□□ -0.95
RBM41-208	ENST00000495517	HEG1	Q9ULI3	1381 aa		9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	DIAPH1	O60610	1272 aa	Known RBP	9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	NME9	Q86XW9	330 aa		9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	SLAIN2	Q9P270	581 aa		9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	LAMB2	P55268	1798 aa		9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	MAP3K19	Q56UN5	1328 aa		9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	HOXC9	P31274	260 aa		9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	TJP1	Q07157	1748 aa		9.13	□□□□□ -0.95
RBM41-208	ENST00000495517	ANKRD36C	Q5JPF3	1778 aa		9.12	□□□□□ -0.95
RBM41-208	ENST00000495517	BCOR	Q6W2J9	1755 aa		9.12	□□□□□ -0.95
RBM41-208	ENST00000495517	ADAMTS8	Q9UP79	889 aa		9.12	□□□□□ -0.95
RBM41-208	ENST00000495517	TNS2	Q63HR2	1409 aa		9.12	□□□□□ -0.95
RBM41-208	ENST00000495517	CALD1	Q05682	793 aa	Known RBP	9.11	□□□□□ -0.95
RBM41-208	ENST00000495517	SLFN5	Q08AF3	891 aa		9.11	□□□□□ -0.95
RBM41-208	ENST00000495517	LMOD3	Q0VAK6	560 aa		9.11	□□□□□ -0.95
RBM41-208	ENST00000495517	CC2D1B	Q5T0F9	858 aa	Known RBP	9.11	□□□□□ -0.95
RBM41-208	ENST00000495517	KRT28	Q7Z3Y7	464 aa		9.11	□□□□□ -0.95
RBM41-208	ENST00000495517		E9PSI1	815 aa		9.1	□□□□□ -0.95
RBM41-208	ENST00000495517	FANCI	Q9NVI1	1328 aa		9.1	□□□□□ -0.95
RBM41-208	ENST00000495517	RBM19	Q9Y4C8	960 aa	Known RBP	9.1	□□□□□ -0.95
RBM41-208	ENST00000495517	EIF4A2	Q14240	407 aa	Known RBP	9.1	□□□□□ -0.95
RBM41-208	ENST00000495517	DOT1L	Q8TEK3	1739 aa		9.09	□□□□□ -0.95
RBM41-208	ENST00000495517	SPATA31A6	Q5VVP1	1343 aa		9.09	□□□□□ -0.95
RBM41-208	ENST00000495517	IL27	Q8NEV9	243 aa		9.09	□□□□□ -0.95
RBM41-208	ENST00000495517	NGDN	Q8NEJ9	315 aa	Known RBP	9.09	□□□□□ -0.95
RBM41-208	ENST00000495517	ZC3H15	Q8WU90	426 aa	Known RBP	9.09	□□□□□ -0.95
RBM41-208	ENST00000495517	GGNBP2	Q9H3C7	697 aa		9.09	□□□□□ -0.95
RBM41-208	ENST00000495517	WDR43	Q15061	677 aa	Known RBP eCLIP	9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	NFE2L2	Q16236	605 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	KCP	Q6ZWJ8	1503 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	TUBGCP6	Q96RT7	1819 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	ERBB3	P21860	1342 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	DUSP27	Q5VZP5	1158 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	TRIM35	Q9UPQ4	493 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	HSPA2	P54652	639 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	IFT57	Q9NWB7	429 aa		9.08	□□□□□ -0.96
RBM41-208	ENST00000495517	TAF1L	Q8IZX4	1826 aa		9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	HOXB7	P09629	217 aa		9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	ZMYND15	Q9H091	742 aa		9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	THRAP3	Q9Y2W1	955 aa	Known RBP	9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	STK25	O00506	426 aa		9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	GC	P02774	474 aa		9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	WWC1	Q8IX03	1113 aa		9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	ORAI2	Q96SN7	254 aa		9.07	□□□□□ -0.96
RBM41-208	ENST00000495517	AMOT	Q4VCS5	1084 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	BCL11A	Q9H165	835 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	JCAD	Q9P266	1359 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	APBB1	O00213	710 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	TMPO	P42166	694 aa	Known RBP	9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	ALDH1L2	Q3SY69	923 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	ESCO1	Q5FWF5	840 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	LRRC59	Q96AG4	307 aa	Known RBP	9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	ARFGEF2	Q9Y6D5	1785 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	MAP3K5	Q99683	1374 aa		9.06	□□□□□ -0.96
RBM41-208	ENST00000495517	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.05	□□□□□ -0.96	9e-7	■■■□□ 16.6
RBM41-208	ENST00000495517	POLA2	Q14181	598 aa		9.05	□□□□□ -0.96
RBM41-208	ENST00000495517	WDR17	Q8IZU2	1322 aa		9.05	□□□□□ -0.96
RBM41-208	ENST00000495517	ATRN	O75882	1429 aa		9.05	□□□□□ -0.96
RBM41-208	ENST00000495517	MEGF6	O75095	1541 aa		9.05	□□□□□ -0.96
RBM41-208	ENST00000495517	CDCA7	Q9BWT1	371 aa	Predicted RBP	9.05	□□□□□ -0.96
RBM41-208	ENST00000495517	GAS2L2	Q8NHY3	880 aa		9.05	□□□□□ -0.96
RBM41-208	ENST00000495517	SCN7A	Q01118	1682 aa		9.04	□□□□□ -0.96
RBM41-208	ENST00000495517	ABTB2	Q8N961	1025 aa		9.04	□□□□□ -0.96
RBM41-208	ENST00000495517	GOLGA2	Q08379	1002 aa		9.04	□□□□□ -0.96
RBM41-208	ENST00000495517	ARHGAP45	Q92619	1136 aa		9.04	□□□□□ -0.96
RBM41-208	ENST00000495517	CASZ1	Q86V15	1759 aa		9.04	□□□□□ -0.96
RBM41-208	ENST00000495517	IGSF3	O75054	1194 aa		9.03	□□□□□ -0.96
RBM41-208	ENST00000495517	CARD10	Q9BWT7	1032 aa		9.03	□□□□□ -0.96
RBM41-208	ENST00000495517	EMILIN1	Q9Y6C2	1016 aa		9.03	□□□□□ -0.96
RBM41-208	ENST00000495517	TNS1	Q9HBL0	1735 aa	Known RBP	9.03	□□□□□ -0.96
RBM41-208	ENST00000495517	CHMP4A	Q9BY43	222 aa		9.03	□□□□□ -0.96
RBM41-208	ENST00000495517	COL15A1	P39059	1388 aa		9.03	□□□□□ -0.96
RBM41-208	ENST00000495517	NLRP6	P59044	892 aa		9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	BARGIN	Q6ZT62	677 aa		9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	TCP11L2	Q8N4U5	519 aa		9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	MYH16	Q9H6N6	1097 aa		9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	KDM6A	O15550	1401 aa	Predicted RBP	9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	CHL1	O00533	1208 aa		9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	TOM1	O60784	492 aa		9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	ATP10D	Q9P241	1426 aa		9.02	□□□□□ -0.97
RBM41-208	ENST00000495517	BCL9L	Q86UU0	1499 aa		9.01	□□□□□ -0.97
RBM41-208	ENST00000495517	SEMA3E	O15041	775 aa		9.01	□□□□□ -0.97
RBM41-208	ENST00000495517	EYA1	Q99502	592 aa		9.01	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms