RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
NUP58-214ENST00000495460 HMGB2P26583 209 aaKnown RBP21.19■□□□□ 0.98
NUP58-214ENST00000495460 ATF5Q9Y2D1 282 aaPredicted RBP21.19■□□□□ 0.98
NUP58-214ENST00000495460 BTAF1O14981 1849 aa21.19■□□□□ 0.98
NUP58-214ENST00000495460 MYOM1P52179 1685 aa21.18■□□□□ 0.98
NUP58-214ENST00000495460 ACSBG1Q96GR2 724 aa21.17■□□□□ 0.98
NUP58-214ENST00000495460 COG3Q96JB2 828 aa21.17■□□□□ 0.98
NUP58-214ENST00000495460 FHDC1Q9C0D6 1143 aaPredicted RBP21.17■□□□□ 0.98
NUP58-214ENST00000495460 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
NUP58-214ENST00000495460 QSER1Q2KHR3 1735 aa21.16■□□□□ 0.98
NUP58-214ENST00000495460 AKT1S1Q96B36 256 aa21.16■□□□□ 0.98
NUP58-214ENST00000495460 ARXQ96QS3 562 aa21.16■□□□□ 0.98
NUP58-214ENST00000495460 LRRC4BQ9NT99 713 aa21.16■□□□□ 0.98
NUP58-214ENST00000495460 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.98
NUP58-214ENST00000495460 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
NUP58-214ENST00000495460 RTL1A6NKG5 1358 aa21.13■□□□□ 0.97
NUP58-214ENST00000495460 ANKRD36BQ8N2N9 1353 aa21.13■□□□□ 0.97
NUP58-214ENST00000495460 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
NUP58-214ENST00000495460 MAP3K19Q56UN5 1328 aa21.13■□□□□ 0.97
NUP58-214ENST00000495460 HOXC9P31274 260 aa21.13■□□□□ 0.97
NUP58-214ENST00000495460 GOLGB1Q14789 3259 aaKnown RBP21.12■□□□□ 0.97
NUP58-214ENST00000495460 ZCRB1Q8TBF4 217 aaKnown RBP21.11■□□□□ 0.97
NUP58-214ENST00000495460 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
NUP58-214ENST00000495460 KIF24Q5T7B8 1368 aa21.1■□□□□ 0.97
NUP58-214ENST00000495460 CHD4Q14839 1912 aa21.1■□□□□ 0.97
NUP58-214ENST00000495460 ZNF827Q17R98 1081 aa21.1■□□□□ 0.97
NUP58-214ENST00000495460 AMPHP49418 695 aa21.09■□□□□ 0.97
NUP58-214ENST00000495460 ZNF784Q8NCA9 323 aaPredicted RBP21.08■□□□□ 0.97
NUP58-214ENST00000495460 FYB1O15117 783 aa21.07■□□□□ 0.96
NUP58-214ENST00000495460 PRIM1P49642 420 aaKnown RBP21.07■□□□□ 0.96
NUP58-214ENST00000495460 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
NUP58-214ENST00000495460 LY75O60449 1722 aa21.07■□□□□ 0.96
NUP58-214ENST00000495460 POLD1P28340 1107 aa21.06■□□□□ 0.96
NUP58-214ENST00000495460 TMF1P82094 1093 aa21.06■□□□□ 0.96
NUP58-214ENST00000495460 NSD2O96028 1365 aa21.06■□□□□ 0.96
NUP58-214ENST00000495460 PNPLA7Q6ZV29 1317 aa21.05■□□□□ 0.96
NUP58-214ENST00000495460 CHRDL2Q6WN34 429 aa21.05■□□□□ 0.96
NUP58-214ENST00000495460 LTV1Q96GA3 475 aaPredicted RBP21.04■□□□□ 0.96
NUP58-214ENST00000495460 TFCP2L1Q9NZI6 479 aa21.04■□□□□ 0.96
NUP58-214ENST00000495460 INSRP06213 1382 aa21.03■□□□□ 0.96
NUP58-214ENST00000495460 SHANK3Q9BYB0 1731 aa21.02■□□□□ 0.96
NUP58-214ENST00000495460 NBPF6Q5VWK0 638 aa21.02■□□□□ 0.96
NUP58-214ENST00000495460 NBPF4Q96M43 638 aa21.02■□□□□ 0.96
NUP58-214ENST00000495460 FOXD4L1Q9NU39 408 aa21.02■□□□□ 0.96
NUP58-214ENST00000495460 SMG6Q86US8 1419 aaKnown RBP21.02■□□□□ 0.96
NUP58-214ENST00000495460 MEGF6O75095 1541 aa21.01■□□□□ 0.95
NUP58-214ENST00000495460 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
NUP58-214ENST00000495460 USP47Q96K76 1375 aa21■□□□□ 0.95
NUP58-214ENST00000495460 SYTL4Q96C24 671 aaPredicted RBP21■□□□□ 0.95
NUP58-214ENST00000495460 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
NUP58-214ENST00000495460 FBLN1P23142 703 aa20.99■□□□□ 0.95
NUP58-214ENST00000495460 FLAD1Q8NFF5 587 aa20.99■□□□□ 0.95
NUP58-214ENST00000495460 CCNL1Q9UK58 526 aaPredicted RBP20.99■□□□□ 0.95
NUP58-214ENST00000495460 FLT4P35916 1363 aa20.98■□□□□ 0.95
NUP58-214ENST00000495460 DOT1LQ8TEK3 1739 aa20.98■□□□□ 0.95
NUP58-214ENST00000495460 RGPD2P0DJD1 1756 aa20.98■□□□□ 0.95
NUP58-214ENST00000495460 TATP17735 454 aaPredicted RBP20.98■□□□□ 0.95
NUP58-214ENST00000495460 RRS1Q15050 365 aaKnown RBP20.97■□□□□ 0.95
NUP58-214ENST00000495460 GPR162Q16538 588 aa20.97■□□□□ 0.95
NUP58-214ENST00000495460 PCDH11XQ9BZA7 1347 aa20.97■□□□□ 0.95
NUP58-214ENST00000495460 PCDH11YQ9BZA8 1340 aa20.97■□□□□ 0.95
NUP58-214ENST00000495460 GGNBP2Q9H3C7 697 aa20.96■□□□□ 0.95
NUP58-214ENST00000495460 TUBGCP6Q96RT7 1819 aa20.95■□□□□ 0.94
NUP58-214ENST00000495460 GRIN3BO60391 1043 aa20.94■□□□□ 0.94
NUP58-214ENST00000495460 HSP90AB2PQ58FF8 381 aa20.94■□□□□ 0.94
NUP58-214ENST00000495460 PLEKHG2Q9H7P9 1386 aa20.94■□□□□ 0.94
NUP58-214ENST00000495460 NCAPD2Q15021 1401 aa20.94■□□□□ 0.94
NUP58-214ENST00000495460 NKX1-1Q15270 411 aaPredicted RBP20.93■□□□□ 0.94
NUP58-214ENST00000495460 SMARCC1Q92922 1105 aaPredicted RBP20.93■□□□□ 0.94
NUP58-214ENST00000495460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.93■□□□□ 0.94
NUP58-214ENST00000495460 COL23A1Q86Y22 540 aaPredicted RBP20.92■□□□□ 0.94
NUP58-214ENST00000495460 KCNQ4P56696 695 aa20.91■□□□□ 0.94
NUP58-214ENST00000495460 C1QTNF8P60827 252 aa20.91■□□□□ 0.94
NUP58-214ENST00000495460 CD2APQ9Y5K6 639 aa20.91■□□□□ 0.94
NUP58-214ENST00000495460 CARD14Q9BXL6 1004 aa20.9■□□□□ 0.94
NUP58-214ENST00000495460 KIF20BQ96Q89 1820 aa20.9■□□□□ 0.94
NUP58-214ENST00000495460 WASHC2AQ641Q2 1341 aa20.89■□□□□ 0.93
NUP58-214ENST00000495460 CYP27B1O15528 508 aa20.89■□□□□ 0.93
NUP58-214ENST00000495460 C5P01031 1676 aa20.88■□□□□ 0.93
NUP58-214ENST00000495460 NSD3Q9BZ95 1437 aa20.87■□□□□ 0.93
NUP58-214ENST00000495460 PALLDQ8WX93 1383 aa20.87■□□□□ 0.93
NUP58-214ENST00000495460 USHBP1Q8N6Y0 703 aa20.87■□□□□ 0.93
NUP58-214ENST00000495460 TAF1LQ8IZX4 1826 aa20.87■□□□□ 0.93
NUP58-214ENST00000495460 PKD1L3Q7Z443 1732 aa20.87■□□□□ 0.93
NUP58-214ENST00000495460 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
NUP58-214ENST00000495460 NLGN2Q8NFZ4 835 aa20.86■□□□□ 0.93
NUP58-214ENST00000495460 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
NUP58-214ENST00000495460 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
NUP58-214ENST00000495460 ANKRD26Q9UPS8 1709 aa20.85■□□□□ 0.93
NUP58-214ENST00000495460 MPRIPQ6WCQ1 1025 aa20.85■□□□□ 0.93
NUP58-214ENST00000495460 ITGB4P16144 1822 aa20.83■□□□□ 0.92
NUP58-214ENST00000495460 PIGBQ92521 554 aa20.82■□□□□ 0.92
NUP58-214ENST00000495460 EMILIN1Q9Y6C2 1016 aa20.82■□□□□ 0.92
NUP58-214ENST00000495460 CEP350Q5VT06 3117 aa20.81■□□□□ 0.92
NUP58-214ENST00000495460 YBX3P16989 372 aaKnown RBP eCLIP20.81■□□□□ 0.92
NUP58-214ENST00000495460 SSFA2P28290 1259 aa20.81■□□□□ 0.92
NUP58-214ENST00000495460 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
NUP58-214ENST00000495460 C4BP0C0L5 1744 aa20.81■□□□□ 0.92
NUP58-214ENST00000495460 GIGYF1O75420 1035 aaPredicted RBP20.8■□□□□ 0.92
NUP58-214ENST00000495460 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms