RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, humanhuman

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-208ENST00000495040 RAPGEF4Q8WZA2 1011 aa36.74■■■■□ 3.47
PLXNA3-208ENST00000495040 SHANK3Q9BYB0 1731 aa36.73■■■■□ 3.47
PLXNA3-208ENST00000495040 MAP2P11137 1827 aaKnown RBP36.73■■■■□ 3.47
PLXNA3-208ENST00000495040 STK32BQ9NY57 414 aa36.71■■■■□ 3.47
PLXNA3-208ENST00000495040 ANKRD26Q9UPS8 1709 aa36.71■■■■□ 3.47
PLXNA3-208ENST00000495040 PPM1GO15355 546 aaPredicted RBP36.69■■■■□ 3.46
PLXNA3-208ENST00000495040 TATP17735 454 aaPredicted RBP36.69■■■■□ 3.46
PLXNA3-208ENST00000495040 PANK3Q9H999 370 aa36.69■■■■□ 3.46
PLXNA3-208ENST00000495040 SPON1Q9HCB6 807 aa36.69■■■■□ 3.46
PLXNA3-208ENST00000495040 WASHC2AQ641Q2 1341 aa36.66■■■■□ 3.46
PLXNA3-208ENST00000495040 SLC15A2Q16348 729 aa36.66■■■■□ 3.46
PLXNA3-208ENST00000495040 DOT1LQ8TEK3 1739 aa36.65■■■■□ 3.46
PLXNA3-208ENST00000495040 CASZ1Q86V15 1759 aa36.65■■■■□ 3.46
PLXNA3-208ENST00000495040 SYTL4Q96C24 671 aaPredicted RBP36.64■■■■□ 3.46
PLXNA3-208ENST00000495040 POLKQ9UBT6 870 aa36.64■■■■□ 3.46
PLXNA3-208ENST00000495040 PRIM1P49642 420 aaKnown RBP36.63■■■■□ 3.45
PLXNA3-208ENST00000495040 PCDH11XQ9BZA7 1347 aa36.59■■■■□ 3.45
PLXNA3-208ENST00000495040 PCDH11YQ9BZA8 1340 aa36.59■■■■□ 3.45
PLXNA3-208ENST00000495040 NSD2O96028 1365 aa36.59■■■■□ 3.45
PLXNA3-208ENST00000495040 PAPPAQ13219 1627 aa36.59■■■■□ 3.45
PLXNA3-208ENST00000495040 TNNT2P45379 298 aaPredicted RBP36.58■■■■□ 3.45
PLXNA3-208ENST00000495040 NCAPD2Q15021 1401 aa36.58■■■■□ 3.45
PLXNA3-208ENST00000495040 SLC27A3Q5K4L6 730 aa36.57■■■■□ 3.44
PLXNA3-208ENST00000495040 PDGFDQ9GZP0 370 aaPredicted RBP36.57■■■■□ 3.44
PLXNA3-208ENST00000495040 PPP1R1BQ9UD71 204 aaPredicted RBP36.57■■■■□ 3.44
PLXNA3-208ENST00000495040 LRRC4BQ9NT99 713 aa36.56■■■■□ 3.44
PLXNA3-208ENST00000495040 EYA1Q99502 592 aa36.53■■■■□ 3.44
PLXNA3-208ENST00000495040 PKD1L3Q7Z443 1732 aa36.52■■■■□ 3.44
PLXNA3-208ENST00000495040 ZBTB7AO95365 584 aa36.51■■■■□ 3.44
PLXNA3-208ENST00000495040 LY75O60449 1722 aa36.51■■■■□ 3.43
PLXNA3-208ENST00000495040 KNSTRNQ9Y448 316 aa36.5■■■■□ 3.43
PLXNA3-208ENST00000495040 CYP27B1O15528 508 aa36.49■■■■□ 3.43
PLXNA3-208ENST00000495040 EIF4A2Q14240 407 aaKnown RBP36.48■■■■□ 3.43
PLXNA3-208ENST00000495040 SPG7Q9UQ90 795 aa36.48■■■■□ 3.43
PLXNA3-208ENST00000495040 KIF7Q2M1P5 1343 aa36.48■■■■□ 3.43
PLXNA3-208ENST00000495040 ZNF827Q17R98 1081 aa36.47■■■■□ 3.43
PLXNA3-208ENST00000495040 MORC1Q86VD1 984 aa36.47■■■■□ 3.43
PLXNA3-208ENST00000495040 AKT1S1Q96B36 256 aa36.45■■■■□ 3.43
PLXNA3-208ENST00000495040 MTFR1LQ9H019 292 aa36.45■■■■□ 3.43
PLXNA3-208ENST00000495040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.45■■■■□ 3.43
PLXNA3-208ENST00000495040 ATF5Q9Y2D1 282 aaPredicted RBP36.45■■■■□ 3.43
PLXNA3-208ENST00000495040 PTGER2P43116 358 aa36.42■■■■□ 3.42
PLXNA3-208ENST00000495040 CCNL1Q9UK58 526 aaPredicted RBP36.42■■■■□ 3.42
PLXNA3-208ENST00000495040 QSER1Q2KHR3 1735 aa36.4■■■■□ 3.42
PLXNA3-208ENST00000495040 KCNQ4P56696 695 aa36.4■■■■□ 3.42
PLXNA3-208ENST00000495040 NKX1-1Q15270 411 aaPredicted RBP36.4■■■■□ 3.42
PLXNA3-208ENST00000495040 ITGB4P16144 1822 aa36.39■■■■□ 3.42
PLXNA3-208ENST00000495040 MPRIPQ6WCQ1 1025 aa36.39■■■■□ 3.42
PLXNA3-208ENST00000495040 IGSF1Q8N6C5 1336 aa36.38■■■■□ 3.41
PLXNA3-208ENST00000495040 TOGARAM1Q9Y4F4 1720 aa36.38■■■■□ 3.41
PLXNA3-208ENST00000495040 PLEKHG2Q9H7P9 1386 aa36.38■■■■□ 3.41
PLXNA3-208ENST00000495040 AMER1Q5JTC6 1135 aaPredicted RBP36.36■■■■□ 3.41
PLXNA3-208ENST00000495040 TFCP2L1Q9NZI6 479 aa36.35■■■■□ 3.41
PLXNA3-208ENST00000495040 IFNL2Q8IZJ0 200 aa36.34■■■■□ 3.41
PLXNA3-208ENST00000495040 HMGB2P26583 209 aaKnown RBP36.33■■■■□ 3.41
PLXNA3-208ENST00000495040 SLC16A10Q8TF71 515 aa36.33■■■■□ 3.41
PLXNA3-208ENST00000495040 SGIP1Q9BQI5 828 aa36.33■■■■□ 3.41
PLXNA3-208ENST00000495040 TUBGCP6Q96RT7 1819 aa36.32■■■■□ 3.41
PLXNA3-208ENST00000495040 PALLDQ8WX93 1383 aa36.32■■■■□ 3.4
PLXNA3-208ENST00000495040 SMARCC1Q92922 1105 aaPredicted RBP36.32■■■■□ 3.4
PLXNA3-208ENST00000495040 PNPLA7Q6ZV29 1317 aa36.32■■■■□ 3.4
PLXNA3-208ENST00000495040 PHKG2P15735 406 aa36.31■■■■□ 3.4
PLXNA3-208ENST00000495040 PIGBQ92521 554 aa36.29■■■■□ 3.4
PLXNA3-208ENST00000495040 DCAF8L1A6NGE4 600 aa36.28■■■■□ 3.4
PLXNA3-208ENST00000495040 PER1O15534 1290 aaPredicted RBP36.27■■■■□ 3.4
PLXNA3-208ENST00000495040 C5P01031 1676 aa36.26■■■■□ 3.4
PLXNA3-208ENST00000495040 TMOD3Q9NYL9 352 aa36.25■■■■□ 3.39
PLXNA3-208ENST00000495040 TAF1LQ8IZX4 1826 aa36.24■■■■□ 3.39
PLXNA3-208ENST00000495040 PLEKHO1Q53GL0 409 aaPredicted RBP36.24■■■■□ 3.39
PLXNA3-208ENST00000495040 ARXQ96QS3 562 aa36.24■■■■□ 3.39
PLXNA3-208ENST00000495040 FHDC1Q9C0D6 1143 aaPredicted RBP36.23■■■■□ 3.39
PLXNA3-208ENST00000495040 AMOTQ4VCS5 1084 aa36.21■■■■□ 3.39
PLXNA3-208ENST00000495040 SYT17Q9BSW7 474 aa36.21■■■■□ 3.39
PLXNA3-208ENST00000495040 HSP90AB1P08238 724 aaKnown RBP36.2■■■■□ 3.39
PLXNA3-208ENST00000495040 IL13P35225 146 aa36.2■■■■□ 3.39
PLXNA3-208ENST00000495040 COL24A1Q17RW2 1714 aa36.2■■■■□ 3.38
PLXNA3-208ENST00000495040 AEBP1Q8IUX7 1158 aa36.19■■■■□ 3.38
PLXNA3-208ENST00000495040 POLD1P28340 1107 aa36.18■■■■□ 3.38
PLXNA3-208ENST00000495040 MTHFSP49914 203 aa36.17■■■■□ 3.38
PLXNA3-208ENST00000495040 CC2D1BQ5T0F9 858 aaKnown RBP36.17■■■■□ 3.38
PLXNA3-208ENST00000495040 SULT6B1Q6IMI4 303 aa36.17■■■■□ 3.38
PLXNA3-208ENST00000495040 MSH5O43196 834 aa36.16■■■■□ 3.38
PLXNA3-208ENST00000495040 ZNF530Q6P9A1 599 aaPredicted RBP36.16■■■■□ 3.38
PLXNA3-208ENST00000495040 COL23A1Q86Y22 540 aaPredicted RBP36.16■■■■□ 3.38
PLXNA3-208ENST00000495040 DCAF5Q96JK2 942 aa36.16■■■■□ 3.38
PLXNA3-208ENST00000495040 KDRP35968 1356 aa36.15■■■■□ 3.38
PLXNA3-208ENST00000495040 FLAD1Q8NFF5 587 aa36.15■■■■□ 3.38
PLXNA3-208ENST00000495040 LOC102724428A0A0B4J2F2 783 aa36.14■■■■□ 3.38
PLXNA3-208ENST00000495040 ERVV-2B6SEH9 535 aa36.14■■■■□ 3.38
PLXNA3-208ENST00000495040 SIK1P57059 783 aa36.14■■■■□ 3.38
PLXNA3-208ENST00000495040 ASAP1Q9ULH1 1129 aa36.14■■■■□ 3.38
PLXNA3-208ENST00000495040 C4BP0C0L5 1744 aa36.14■■■■□ 3.38
PLXNA3-208ENST00000495040 MAP3K5Q99683 1374 aa36.14■■■■□ 3.38
PLXNA3-208ENST00000495040 NPC1L1Q9UHC9 1359 aa36.14■■■■□ 3.38
PLXNA3-208ENST00000495040 AK7Q96M32 723 aa36.11■■■■□ 3.37
PLXNA3-208ENST00000495040 C1orf141Q5JVX7 400 aa36.1■■■■□ 3.37
PLXNA3-208ENST00000495040 ATG3Q9NT62 314 aa36.1■■■■□ 3.37
PLXNA3-208ENST00000495040 KDM6AO15550 1401 aaPredicted RBP36.07■■■■□ 3.36
PLXNA3-208ENST00000495040 ATP6V1AP38606 617 aa36.06■■■■□ 3.36
PLXNA3-208ENST00000495040 UBR3Q6ZT12 1888 aa36.05■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms