RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 AMOTQ4VCS5 1084 aa14.39□□□□□ -0.11
PKP4-215ENST00000494945 MYH16Q9H6N6 1097 aa14.39□□□□□ -0.11
PKP4-215ENST00000494945 CRB1P82279 1406 aa14.39□□□□□ -0.11
PKP4-215ENST00000494945 MAP3K5Q99683 1374 aa14.38□□□□□ -0.11
PKP4-215ENST00000494945 MEGF6O75095 1541 aa14.38□□□□□ -0.11
PKP4-215ENST00000494945 PLEKHO1Q53GL0 409 aaPredicted RBP14.38□□□□□ -0.11
PKP4-215ENST00000494945 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
PKP4-215ENST00000494945 SPATA31A6Q5VVP1 1343 aa14.38□□□□□ -0.11
PKP4-215ENST00000494945 EVA1CP58658 441 aa14.37□□□□□ -0.11
PKP4-215ENST00000494945 TOM1L2Q6ZVM7 507 aa14.37□□□□□ -0.11
PKP4-215ENST00000494945 RAPGEF4Q8WZA2 1011 aa14.37□□□□□ -0.11
PKP4-215ENST00000494945 CARD10Q9BWT7 1032 aa14.37□□□□□ -0.11
PKP4-215ENST00000494945 BTG4Q9NY30 223 aa14.37□□□□□ -0.11
PKP4-215ENST00000494945 SLIT2O94813 1529 aa14.36□□□□□ -0.11
PKP4-215ENST00000494945 OVOS2A0A0G2JMS6 1433 aa14.36□□□□□ -0.11
PKP4-215ENST00000494945 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
PKP4-215ENST00000494945 TATP17735 454 aaPredicted RBP14.36□□□□□ -0.11
PKP4-215ENST00000494945 RTF1Q92541 710 aaKnown RBP14.36□□□□□ -0.11
PKP4-215ENST00000494945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.36□□□□□ -0.113e-9■■□□□ 11.5
PKP4-215ENST00000494945 GNAI1P63096 354 aa14.35□□□□□ -0.11
PKP4-215ENST00000494945 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
PKP4-215ENST00000494945 ITGB4P16144 1822 aa14.34□□□□□ -0.11
PKP4-215ENST00000494945 NUTM2BA6NNL0 878 aaPredicted RBP14.34□□□□□ -0.11
PKP4-215ENST00000494945 NUTM2EB1AL46 878 aaPredicted RBP14.34□□□□□ -0.11
PKP4-215ENST00000494945 ADAMTS2O95450 1211 aa14.34□□□□□ -0.11
PKP4-215ENST00000494945 AKAP4Q5JQC9 854 aa14.34□□□□□ -0.11
PKP4-215ENST00000494945 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
PKP4-215ENST00000494945 NUTM2AQ8IVF1 878 aaPredicted RBP14.34□□□□□ -0.11
PKP4-215ENST00000494945 STRN4Q9NRL3 753 aa14.34□□□□□ -0.11
PKP4-215ENST00000494945 RCAN3Q9UKA8 241 aa14.34□□□□□ -0.11
PKP4-215ENST00000494945 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
PKP4-215ENST00000494945 LRP6O75581 1613 aa14.33□□□□□ -0.11
PKP4-215ENST00000494945 ZNF853P0CG23 659 aa14.33□□□□□ -0.12
PKP4-215ENST00000494945 HSPA1LP34931 641 aa14.33□□□□□ -0.12
PKP4-215ENST00000494945 ZNF530Q6P9A1 599 aaPredicted RBP14.33□□□□□ -0.12
PKP4-215ENST00000494945 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
PKP4-215ENST00000494945 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
PKP4-215ENST00000494945 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
PKP4-215ENST00000494945 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.12
PKP4-215ENST00000494945 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.12
PKP4-215ENST00000494945 DCTN1Q14203 1278 aa14.32□□□□□ -0.12
PKP4-215ENST00000494945 C1orf141Q5JVX7 400 aa14.32□□□□□ -0.12
PKP4-215ENST00000494945 MCM10Q7L590 875 aa14.32□□□□□ -0.12
PKP4-215ENST00000494945 CEMIPQ8WUJ3 1361 aa14.32□□□□□ -0.12
PKP4-215ENST00000494945 CT47B1P0C2W7 299 aaPredicted RBP14.31□□□□□ -0.12
PKP4-215ENST00000494945 TOGARAM1Q9Y4F4 1720 aa14.31□□□□□ -0.12
PKP4-215ENST00000494945 RNF123Q5XPI4 1314 aa14.31□□□□□ -0.12
PKP4-215ENST00000494945 NEFLP07196 543 aa14.3□□□□□ -0.12
PKP4-215ENST00000494945 IL2RBP14784 551 aa14.3□□□□□ -0.12
PKP4-215ENST00000494945 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
PKP4-215ENST00000494945 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
PKP4-215ENST00000494945 MRC1P22897 1456 aa14.3□□□□□ -0.12
PKP4-215ENST00000494945 IL17REQ8NFR9 667 aa14.29□□□□□ -0.12
PKP4-215ENST00000494945 BABAM1Q9NWV8 329 aa14.29□□□□□ -0.12
PKP4-215ENST00000494945 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
PKP4-215ENST00000494945 CHL1O00533 1208 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 PAPPAQ13219 1627 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 UBR2Q8IWV8 1755 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 IFNL2Q8IZJ0 200 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 PCDH11XQ9BZA7 1347 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 PCDH11YQ9BZA8 1340 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 MBIPQ9NS73 344 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 GTF3C3Q9Y5Q9 886 aa14.28□□□□□ -0.12
PKP4-215ENST00000494945 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.12
PKP4-215ENST00000494945 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
PKP4-215ENST00000494945 HSP90AB1P08238 724 aaKnown RBP14.27□□□□□ -0.13
PKP4-215ENST00000494945 PHKG2P15735 406 aa14.27□□□□□ -0.13
PKP4-215ENST00000494945 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
PKP4-215ENST00000494945 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.13
PKP4-215ENST00000494945 THRAP3Q9Y2W1 955 aaKnown RBP14.27□□□□□ -0.13
PKP4-215ENST00000494945 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
PKP4-215ENST00000494945 SPATA31A1Q5TZJ5 1347 aa14.26□□□□□ -0.13
PKP4-215ENST00000494945 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
PKP4-215ENST00000494945 TAF7Q15545 349 aaPredicted RBP14.26□□□□□ -0.13
PKP4-215ENST00000494945 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
PKP4-215ENST00000494945 FNBP4Q8N3X1 1017 aaPredicted RBP14.26□□□□□ -0.13
PKP4-215ENST00000494945 NGLY1Q96IV0 654 aa14.26□□□□□ -0.13
PKP4-215ENST00000494945 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
PKP4-215ENST00000494945 LAMB4A4D0S4 1761 aa14.26□□□□□ -0.13
PKP4-215ENST00000494945 SPATA31A5Q5VU36 1347 aa14.25□□□□□ -0.13
PKP4-215ENST00000494945 SPATA31A7Q8IWB4 1347 aa14.25□□□□□ -0.13
PKP4-215ENST00000494945 RRP1P56182 461 aaKnown RBP14.25□□□□□ -0.13
PKP4-215ENST00000494945 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
PKP4-215ENST00000494945 ZNF428Q96B54 188 aa14.25□□□□□ -0.13
PKP4-215ENST00000494945 C8orf37Q96NL8 207 aa14.25□□□□□ -0.13
PKP4-215ENST00000494945 TNS2Q63HR2 1409 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 C5P01031 1676 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 THSD7AQ9UPZ6 1657 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 CYP27B1O15528 508 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 TEFQ10587 303 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 LGR6Q9HBX8 967 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 TSPYL4Q9UJ04 414 aa14.24□□□□□ -0.13
PKP4-215ENST00000494945 RARSP54136 660 aaKnown RBP14.23□□□□□ -0.13
PKP4-215ENST00000494945 VPS72Q15906 364 aa14.23□□□□□ -0.13
PKP4-215ENST00000494945 MEX3CQ5U5Q3 659 aaKnown RBP14.23□□□□□ -0.13
PKP4-215ENST00000494945 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
PKP4-215ENST00000494945 DCAF5Q96JK2 942 aa14.23□□□□□ -0.13
PKP4-215ENST00000494945 N4BP2Q86UW6 1770 aaPredicted RBP14.23□□□□□ -0.13
PKP4-215ENST00000494945 SOS1Q07889 1333 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms