RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
CALCA-206ENST00000494746 OVOS2A0A0G2JMS6 1433 aa12.82□□□□□ -0.36
CALCA-206ENST00000494746 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
CALCA-206ENST00000494746 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
CALCA-206ENST00000494746 IL2RBP14784 551 aa12.81□□□□□ -0.36
CALCA-206ENST00000494746 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
CALCA-206ENST00000494746 BRWD3Q6RI45 1802 aa12.81□□□□□ -0.36
CALCA-206ENST00000494746 PRKAR2BP31323 418 aa12.81□□□□□ -0.36
CALCA-206ENST00000494746 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
CALCA-206ENST00000494746 RGS12O14924 1447 aa12.8□□□□□ -0.36
CALCA-206ENST00000494746 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CALCA-206ENST00000494746 FCHSD2O94868 740 aa12.8□□□□□ -0.36
CALCA-206ENST00000494746 RXRBP28702 533 aa12.8□□□□□ -0.36
CALCA-206ENST00000494746 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
CALCA-206ENST00000494746 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
CALCA-206ENST00000494746 A0A0G2JS52 829 aa12.78□□□□□ -0.36
CALCA-206ENST00000494746 TATP17735 454 aaPredicted RBP12.78□□□□□ -0.36
CALCA-206ENST00000494746 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
CALCA-206ENST00000494746 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
CALCA-206ENST00000494746 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
CALCA-206ENST00000494746 SEPT12Q8IYM1 358 aa12.78□□□□□ -0.36
CALCA-206ENST00000494746 CDCA7Q9BWT1 371 aaPredicted RBP12.78□□□□□ -0.36
CALCA-206ENST00000494746 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
CALCA-206ENST00000494746 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.36
CALCA-206ENST00000494746 DDB1Q16531 1140 aa12.76□□□□□ -0.37
CALCA-206ENST00000494746 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
CALCA-206ENST00000494746 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
CALCA-206ENST00000494746 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
CALCA-206ENST00000494746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
CALCA-206ENST00000494746 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
CALCA-206ENST00000494746 EXOC5O00471 708 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 CYP27B1O15528 508 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
CALCA-206ENST00000494746 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
CALCA-206ENST00000494746 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
CALCA-206ENST00000494746 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
CALCA-206ENST00000494746 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
CALCA-206ENST00000494746 ZNF530Q6P9A1 599 aaPredicted RBP12.73□□□□□ -0.37
CALCA-206ENST00000494746 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
CALCA-206ENST00000494746 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
CALCA-206ENST00000494746 PHKG2P15735 406 aa12.72□□□□□ -0.37
CALCA-206ENST00000494746 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
CALCA-206ENST00000494746 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
CALCA-206ENST00000494746 APAF1O14727 1248 aa12.72□□□□□ -0.37
CALCA-206ENST00000494746 NEFMP07197 916 aa12.72□□□□□ -0.37
CALCA-206ENST00000494746 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
CALCA-206ENST00000494746 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
CALCA-206ENST00000494746 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
CALCA-206ENST00000494746 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
CALCA-206ENST00000494746 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.38
CALCA-206ENST00000494746 KRT27Q7Z3Y8 459 aa12.71□□□□□ -0.38
CALCA-206ENST00000494746 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.38
CALCA-206ENST00000494746 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
CALCA-206ENST00000494746 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
CALCA-206ENST00000494746 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
CALCA-206ENST00000494746 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
CALCA-206ENST00000494746 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
CALCA-206ENST00000494746 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
CALCA-206ENST00000494746 AKAP4Q5JQC9 854 aa12.69□□□□□ -0.38
CALCA-206ENST00000494746 C1orf141Q5JVX7 400 aa12.69□□□□□ -0.38
CALCA-206ENST00000494746 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
CALCA-206ENST00000494746 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
CALCA-206ENST00000494746 ITGB4P16144 1822 aa12.69□□□□□ -0.38
CALCA-206ENST00000494746 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
CALCA-206ENST00000494746 RIPK4P57078 832 aa12.68□□□□□ -0.38
CALCA-206ENST00000494746 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
CALCA-206ENST00000494746 SUPT16HQ9Y5B9 1047 aaKnown RBP12.68□□□□□ -0.38
CALCA-206ENST00000494746 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
CALCA-206ENST00000494746 BCL9O00512 1426 aa12.67□□□□□ -0.38
CALCA-206ENST00000494746 SIPA1L3O60292 1781 aaPredicted RBP12.67□□□□□ -0.38
CALCA-206ENST00000494746 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
CALCA-206ENST00000494746 MCM10Q7L590 875 aa12.67□□□□□ -0.38
CALCA-206ENST00000494746 LGR6Q9HBX8 967 aa12.67□□□□□ -0.38
CALCA-206ENST00000494746 MRC1P22897 1456 aa12.66□□□□□ -0.38
CALCA-206ENST00000494746 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
CALCA-206ENST00000494746 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
CALCA-206ENST00000494746 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
CALCA-206ENST00000494746 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
CALCA-206ENST00000494746 CEMIPQ8WUJ3 1361 aa12.66□□□□□ -0.38
CALCA-206ENST00000494746 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.38
CALCA-206ENST00000494746 ACSBG1Q96GR2 724 aa12.65□□□□□ -0.38
CALCA-206ENST00000494746 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
CALCA-206ENST00000494746 RNMTO43148 476 aaKnown RBP12.65□□□□□ -0.39
CALCA-206ENST00000494746 KCNQ2O43526 872 aa12.64□□□□□ -0.39
CALCA-206ENST00000494746 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
CALCA-206ENST00000494746 ILDR2Q71H61 639 aa12.64□□□□□ -0.39
CALCA-206ENST00000494746 PTF1AQ7RTS3 328 aa12.64□□□□□ -0.39
CALCA-206ENST00000494746 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
CALCA-206ENST00000494746 BTAF1O14981 1849 aa12.64□□□□□ -0.39
CALCA-206ENST00000494746 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
CALCA-206ENST00000494746 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
CALCA-206ENST00000494746 TNS1Q9HBL0 1735 aaKnown RBP12.63□□□□□ -0.39
CALCA-206ENST00000494746 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
CALCA-206ENST00000494746 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
CALCA-206ENST00000494746 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms