RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SSH2Q76I76 1423 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 HECW2Q9P2P5 1572 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 ZCCHC11Q5TAX3 1644 aaKnown RBP5.8□□□□□ -1.48
PRKD3-210ENST00000494667 PRPF40AO75400 957 aaKnown RBP5.8□□□□□ -1.48
PRKD3-210ENST00000494667 CCDC183Q5T5S1 534 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 TSC1Q92574 1164 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 PSD3Q9NYI0 1048 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 ADCY5O95622 1261 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 PTMAP06454 111 aaKnown RBP5.79□□□□□ -1.48
PRKD3-210ENST00000494667 CDC25BP30305 580 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 GOLGA6L6A8MZA4 724 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 TRIM27P14373 513 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 H2AFXP16104 143 aaPredicted RBP5.79□□□□□ -1.48
PRKD3-210ENST00000494667 PUS7Q96PZ0 661 aaKnown RBP5.79□□□□□ -1.48
PRKD3-210ENST00000494667 FRMPD1Q5SYB0 1578 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 MAGI1Q96QZ7 1491 aaPredicted RBP5.79□□□□□ -1.48
PRKD3-210ENST00000494667 RPAINQ86UA6 219 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 ARID3AQ99856 593 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 NCAPGQ9BPX3 1015 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 NSFL1CQ9UNZ2 370 aaKnown RBP5.79□□□□□ -1.48
PRKD3-210ENST00000494667 TNNQ9UQP3 1299 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 SETD1AO15047 1707 aaKnown RBP5.79□□□□□ -1.48
PRKD3-210ENST00000494667 CRYBG1Q9Y4K1 1723 aa5.79□□□□□ -1.48
PRKD3-210ENST00000494667 ERBB3P21860 1342 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 TUBB4AP04350 444 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 RAD51AP2Q09MP3 1159 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 TXLNBQ8N3L3 684 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 CFDP1Q9UEE9 299 aaPredicted RBP5.78□□□□□ -1.48
PRKD3-210ENST00000494667 QRICH2Q9H0J4 1663 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 FAM135BQ49AJ0 1406 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 PTPRCP08575 1304 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 ST18O60284 1047 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 ERO1AQ96HE7 468 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 V9GYY5 206 aaPredicted RBP5.78□□□□□ -1.48
PRKD3-210ENST00000494667 RGS12O14924 1447 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 MX1P20591 662 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 GUCY2CP25092 1073 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 RBM6P78332 1123 aaKnown RBP5.78□□□□□ -1.48
PRKD3-210ENST00000494667 CCDC146Q8IYE0 955 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 MSL3Q8N5Y2 521 aaKnown RBP5.78□□□□□ -1.48
PRKD3-210ENST00000494667 PYCARDQ9ULZ3 195 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 ELP1O95163 1332 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 CCDC171Q6TFL3 1326 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 RPS6KA5O75582 802 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 SWT1Q5T5J6 900 aaKnown RBP5.78□□□□□ -1.48
PRKD3-210ENST00000494667 PLCD3Q8N3E9 789 aa5.78□□□□□ -1.48
PRKD3-210ENST00000494667 TRIM6-TRIM34B2RNG4 842 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 ANAPC15P60006 121 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 KMT5BQ4FZB7 885 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 NYAP1Q6ZVC0 841 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 MYCBPQ99417 103 aaPredicted RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 TRIM34Q9BYJ4 488 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 RASSF4Q9H2L5 321 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 CD109Q6YHK3 1445 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 SYCP2Q9BX26 1530 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 NEMFO60524 1076 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 PKP1Q13835 747 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 ICE2Q659A1 982 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 TTC12Q9H892 705 aaPredicted RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 ADGRL3Q9HAR2 1447 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 KIF2AO00139 706 aaPredicted RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 IPO8O15397 1037 aaKnown RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 DHX16O60231 1041 aaKnown RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 CPP00450 1065 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 KCNJ6P48051 423 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 HNRNPH2P55795 449 aaKnown RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 GSCP56915 257 aaPredicted RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 BMS1Q14692 1282 aaKnown RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 SUGP1Q8IWZ8 645 aaKnown RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 NFATC2IPQ8NCF5 419 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 RBM42Q9BTD8 480 aaKnown RBP5.77□□□□□ -1.49
PRKD3-210ENST00000494667 L2HGDHQ9H9P8 463 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 ITSN1Q15811 1721 aa5.77□□□□□ -1.49
PRKD3-210ENST00000494667 SLC26A8Q96RN1 970 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 KIF1CO43896 1103 aaKnown RBP5.76□□□□□ -1.49
PRKD3-210ENST00000494667 ZRANB2O95218 330 aaKnown RBP eCLIP5.76□□□□□ -1.49
PRKD3-210ENST00000494667 CASQ1P31415 396 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 TCP11L2Q8N4U5 519 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 SIRT1Q96EB6 747 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 ZNF446Q9NWS9 450 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 PLEKHG2Q9H7P9 1386 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 ABCC4O15439 1325 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 PREX1Q8TCU6 1659 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 TTC22Q5TAA0 569 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 INTS3Q68E01 1043 aaKnown RBP5.76□□□□□ -1.49
PRKD3-210ENST00000494667 RBM43Q6ZSC3 357 aaKnown RBP5.76□□□□□ -1.49
PRKD3-210ENST00000494667 PLA2G4DQ86XP0 818 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 CLTCQ00610 1675 aaKnown RBP5.76□□□□□ -1.49
PRKD3-210ENST00000494667 PLCH2O75038 1416 aa5.76□□□□□ -1.49
PRKD3-210ENST00000494667 GSPT1P15170 499 aaKnown RBP5.75□□□□□ -1.49
PRKD3-210ENST00000494667 FHOD1Q9Y613 1164 aa5.75□□□□□ -1.49
PRKD3-210ENST00000494667 CDK12Q9NYV4 1490 aaPredicted RBP5.75□□□□□ -1.49
PRKD3-210ENST00000494667 UBE2HP62256 183 aa5.75□□□□□ -1.49
PRKD3-210ENST00000494667 CCDC112Q8NEF3 446 aa5.75□□□□□ -1.49
PRKD3-210ENST00000494667 NOL10Q9BSC4 688 aaKnown RBP5.75□□□□□ -1.49
PRKD3-210ENST00000494667 OSBPL3Q9H4L5 887 aa5.75□□□□□ -1.49
PRKD3-210ENST00000494667 HDAC5Q9UQL6 1122 aa5.75□□□□□ -1.49
PRKD3-210ENST00000494667 KDM2AQ9Y2K7 1162 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms