RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 PRKAR2BP31323 418 aa18.79■□□□□ 0.6
CNNM3-205ENST00000494595 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
CNNM3-205ENST00000494595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.79■□□□□ 0.6
CNNM3-205ENST00000494595 THSD7AQ9UPZ6 1657 aa18.78■□□□□ 0.6
CNNM3-205ENST00000494595 PHACTR3Q96KR7 559 aa18.76■□□□□ 0.59
CNNM3-205ENST00000494595 RGS12O14924 1447 aa18.75■□□□□ 0.59
CNNM3-205ENST00000494595 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
CNNM3-205ENST00000494595 EXOC5O00471 708 aa18.75■□□□□ 0.59
CNNM3-205ENST00000494595 DDB1Q16531 1140 aa18.75■□□□□ 0.59
CNNM3-205ENST00000494595 AMOTQ4VCS5 1084 aa18.75■□□□□ 0.59
CNNM3-205ENST00000494595 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
CNNM3-205ENST00000494595 PLEKHO1Q53GL0 409 aaPredicted RBP18.74■□□□□ 0.59
CNNM3-205ENST00000494595 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
CNNM3-205ENST00000494595 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
CNNM3-205ENST00000494595 FAM9BQ8IZU0 186 aa18.73■□□□□ 0.59
CNNM3-205ENST00000494595 SPG7Q9UQ90 795 aa18.73■□□□□ 0.59
CNNM3-205ENST00000494595 CYP27B1O15528 508 aa18.72■□□□□ 0.59
CNNM3-205ENST00000494595 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
CNNM3-205ENST00000494595 WNK3Q9BYP7 1800 aa18.72■□□□□ 0.59
CNNM3-205ENST00000494595 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
CNNM3-205ENST00000494595 LRRC37A3O60309 1634 aa18.71■□□□□ 0.59
CNNM3-205ENST00000494595 A0A0G2JS52 829 aa18.71■□□□□ 0.59
CNNM3-205ENST00000494595 MYT1Q01538 1121 aa18.71■□□□□ 0.59
CNNM3-205ENST00000494595 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
CNNM3-205ENST00000494595 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
CNNM3-205ENST00000494595 PCDH11XQ9BZA7 1347 aa18.71■□□□□ 0.59
CNNM3-205ENST00000494595 PCDH11YQ9BZA8 1340 aa18.71■□□□□ 0.59
CNNM3-205ENST00000494595 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
CNNM3-205ENST00000494595 PHKG2P15735 406 aa18.69■□□□□ 0.58
CNNM3-205ENST00000494595 ZNF530Q6P9A1 599 aaPredicted RBP18.69■□□□□ 0.58
CNNM3-205ENST00000494595 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
CNNM3-205ENST00000494595 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
CNNM3-205ENST00000494595 PDE3BQ13370 1112 aa18.68■□□□□ 0.58
CNNM3-205ENST00000494595 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
CNNM3-205ENST00000494595 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
CNNM3-205ENST00000494595 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
CNNM3-205ENST00000494595 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
CNNM3-205ENST00000494595 BCL9O00512 1426 aa18.67■□□□□ 0.58
CNNM3-205ENST00000494595 NFE2L2Q16236 605 aa18.67■□□□□ 0.58
CNNM3-205ENST00000494595 AKAP4Q5JQC9 854 aa18.67■□□□□ 0.58
CNNM3-205ENST00000494595 NEFMP07197 916 aa18.66■□□□□ 0.58
CNNM3-205ENST00000494595 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
CNNM3-205ENST00000494595 APAF1O14727 1248 aa18.65■□□□□ 0.58
CNNM3-205ENST00000494595 SHANK3Q9BYB0 1731 aa18.65■□□□□ 0.58
CNNM3-205ENST00000494595 C1orf141Q5JVX7 400 aa18.64■□□□□ 0.57
CNNM3-205ENST00000494595 MAP3K5Q99683 1374 aa18.63■□□□□ 0.57
CNNM3-205ENST00000494595 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
CNNM3-205ENST00000494595 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
CNNM3-205ENST00000494595 HSP90AB1P08238 724 aaKnown RBP18.62■□□□□ 0.57
CNNM3-205ENST00000494595 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
CNNM3-205ENST00000494595 FAM182BQ5T319 152 aa18.62■□□□□ 0.57
CNNM3-205ENST00000494595 DCAF5Q96JK2 942 aa18.62■□□□□ 0.57
CNNM3-205ENST00000494595 KDM6AO15550 1401 aaPredicted RBP18.62■□□□□ 0.57
CNNM3-205ENST00000494595 RIPK4P57078 832 aa18.61■□□□□ 0.57
CNNM3-205ENST00000494595 IL17REQ8NFR9 667 aa18.61■□□□□ 0.57
CNNM3-205ENST00000494595 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
CNNM3-205ENST00000494595 MPRIPQ6WCQ1 1025 aa18.6■□□□□ 0.57
CNNM3-205ENST00000494595 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
CNNM3-205ENST00000494595 TRIM35Q9UPQ4 493 aa18.6■□□□□ 0.57
CNNM3-205ENST00000494595 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
CNNM3-205ENST00000494595 RNMTO43148 476 aaKnown RBP18.59■□□□□ 0.57
CNNM3-205ENST00000494595 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
CNNM3-205ENST00000494595 CCDC27Q2M243 656 aa18.58■□□□□ 0.56
CNNM3-205ENST00000494595 BRWD3Q6RI45 1802 aa18.58■□□□□ 0.56
CNNM3-205ENST00000494595 ERVV-2B6SEH9 535 aa18.57■□□□□ 0.56
CNNM3-205ENST00000494595 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
CNNM3-205ENST00000494595 ILDR2Q71H61 639 aa18.57■□□□□ 0.56
CNNM3-205ENST00000494595 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
CNNM3-205ENST00000494595 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
CNNM3-205ENST00000494595 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
CNNM3-205ENST00000494595 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
CNNM3-205ENST00000494595 MCM10Q7L590 875 aa18.56■□□□□ 0.56
CNNM3-205ENST00000494595 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
CNNM3-205ENST00000494595 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
CNNM3-205ENST00000494595 MRC1P22897 1456 aa18.54■□□□□ 0.56
CNNM3-205ENST00000494595 KCNQ2O43526 872 aa18.54■□□□□ 0.56
CNNM3-205ENST00000494595 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
CNNM3-205ENST00000494595 ACSBG1Q96GR2 724 aa18.54■□□□□ 0.56
CNNM3-205ENST00000494595 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
CNNM3-205ENST00000494595 PTF1AQ7RTS3 328 aa18.53■□□□□ 0.56
CNNM3-205ENST00000494595 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
CNNM3-205ENST00000494595 SLC52A2Q9HAB3 445 aa18.53■□□□□ 0.56
CNNM3-205ENST00000494595 ZNF521Q96K83 1311 aa18.52■□□□□ 0.56
CNNM3-205ENST00000494595 PIGBQ92521 554 aa18.52■□□□□ 0.56
CNNM3-205ENST00000494595 BCL11BQ9C0K0 894 aaPredicted RBP18.52■□□□□ 0.56
CNNM3-205ENST00000494595 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.55
CNNM3-205ENST00000494595 CABP4P57796 275 aa18.51■□□□□ 0.55
CNNM3-205ENST00000494595 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
CNNM3-205ENST00000494595 TRIM37O94972 964 aa18.5■□□□□ 0.55
CNNM3-205ENST00000494595 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
CNNM3-205ENST00000494595 TEFQ10587 303 aa18.49■□□□□ 0.55
CNNM3-205ENST00000494595 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
CNNM3-205ENST00000494595 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
CNNM3-205ENST00000494595 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
CNNM3-205ENST00000494595 DOT1LQ8TEK3 1739 aa18.47■□□□□ 0.55
CNNM3-205ENST00000494595 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
CNNM3-205ENST00000494595 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
CNNM3-205ENST00000494595 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
CNNM3-205ENST00000494595 NHSQ6T4R5 1651 aa18.47■□□□□ 0.55
CNNM3-205ENST00000494595 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms