RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ARMC3Q5W041 872 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 CYB5RLQ6IPT4 315 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 ARMCX6Q7L4S7 300 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 NBPF5PQ86XG9 351 aaPredicted RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 PANK1Q8TE04 598 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 BORCS6Q96GS4 357 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 NBPF4Q96M43 638 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 IFT57Q9NWB7 429 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 NSFL1CQ9UNZ2 370 aaKnown RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 PDZRN3Q9UPQ7 1066 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 NCOA1Q15788 1441 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 PPP1R12AO14974 1030 aaPredicted RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 REC8O95072 547 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 CD2BP2O95400 341 aaKnown RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 ST5P78524 1137 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 WDR43Q15061 677 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATG3-207ENST00000494571 ELF2Q15723 593 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 TSGA10IPQ3SY00 556 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 NAIF1Q69YI7 327 aaPredicted RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 FBXO38Q6PIJ6 1188 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 ZNF397Q8NF99 534 aaPredicted RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 GPT2Q8TD30 523 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 L3MBTL2Q969R5 705 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 TSPY26PQ9H489 355 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 MED4Q9NPJ6 270 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 CWC15Q9P013 229 aaKnown RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 BIN2Q9UBW5 565 aaPredicted RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 CIZ1Q9ULV3 898 aaPredicted RBP4.85□□□□□ -1.63
ATG3-207ENST00000494571 CFAP74Q9C0B2 1584 aa4.85□□□□□ -1.63
ATG3-207ENST00000494571 CALRP27797 417 aaKnown RBP4.84□□□□□ -1.63
ATG3-207ENST00000494571 MNAT1P51948 309 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 RBM6P78332 1123 aaKnown RBP4.84□□□□□ -1.63
ATG3-207ENST00000494571 PKP1Q13835 747 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 SMC5Q8IY18 1101 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 TXLNBQ8N3L3 684 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 GAS2L2Q8NHY3 880 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 LMAN1P49257 510 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 CCT2P78371 535 aaKnown RBP4.84□□□□□ -1.63
ATG3-207ENST00000494571 NBPF10Q6P3W6 841 aaKnown RBP4.84□□□□□ -1.63
ATG3-207ENST00000494571 SRLQ86TD4 932 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 SMARCE1Q969G3 411 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 ZCCHC17Q9NP64 241 aaKnown RBP4.84□□□□□ -1.63
ATG3-207ENST00000494571 LMBRD1Q9NUN5 540 aa4.84□□□□□ -1.63
ATG3-207ENST00000494571 RBM28Q9NW13 759 aaKnown RBP4.84□□□□□ -1.63
ATG3-207ENST00000494571 IBTKQ9P2D0 1353 aaPredicted RBP4.84□□□□□ -1.64
ATG3-207ENST00000494571 REREQ9P2R6 1566 aa4.84□□□□□ -1.64
ATG3-207ENST00000494571 DDIT3P35638 169 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 FAM184AQ8NB25 1140 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 SPTLC3Q9NUV7 552 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 EXOC6BQ9Y2D4 811 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 GPS2Q13227 327 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 MAP9Q49MG5 647 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 MCTP2Q6DN12 878 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 MORC1Q86VD1 984 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 OTUD6BQ8N6M0 293 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 CLUAP1Q96AJ1 413 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 ZNF215Q9UL58 517 aaPredicted RBP4.83□□□□□ -1.64
ATG3-207ENST00000494571 ZMYM4Q5VZL5 1548 aa4.83□□□□□ -1.64
ATG3-207ENST00000494571 MYBBP1AQ9BQG0 1328 aaKnown RBP4.83□□□□□ -1.64
ATG3-207ENST00000494571 PCF11O94913 1555 aaKnown RBP4.83□□□□□ -1.64
ATG3-207ENST00000494571 DHX29Q7Z478 1369 aaKnown RBP4.83□□□□□ -1.64
ATG3-207ENST00000494571 KDM4FA0A1W2PPD8 638 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 NBPF8Q3BBV2 869 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 CWC27Q6UX04 472 aaKnown RBP4.82□□□□□ -1.64
ATG3-207ENST00000494571 DNAAF4Q8WXU2 420 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 RAPGEF2Q9Y4G8 1499 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 SMTNL1A8MU46 457 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 K7ELQ4 463 aaPredicted RBP4.82□□□□□ -1.64
ATG3-207ENST00000494571 DHX8Q14562 1220 aaKnown RBP4.82□□□□□ -1.64
ATG3-207ENST00000494571 TPD52L1Q16890 204 aaPredicted RBP4.82□□□□□ -1.64
ATG3-207ENST00000494571 DRC7Q8IY82 874 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 KIAA1524Q8TCG1 905 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 PDRG1Q9NUG6 133 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 SOCS7O14512 581 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 TPM3P06753 285 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 HCLS1P14317 486 aaPredicted RBP4.82□□□□□ -1.64
ATG3-207ENST00000494571 POLD1P28340 1107 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 DNAJC14Q6Y2X3 702 aaPredicted RBP4.82□□□□□ -1.64
ATG3-207ENST00000494571 GIMAP7Q8NHV1 300 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 THOC1Q96FV9 657 aaKnown RBP4.82□□□□□ -1.64
ATG3-207ENST00000494571 PICK1Q9NRD5 415 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 ATG3Q9NT62 314 aa4.82□□□□□ -1.64
ATG3-207ENST00000494571 FAM135AQ9P2D6 1515 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 SPATA31D1Q6ZQQ2 1576 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 BCORL1Q5H9F3 1711 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 FRMD3A2A2Y4 597 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 HTATSF1O43719 755 aaKnown RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 PTGS1P23219 599 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 PAX7P23759 505 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 SETQ01105 290 aaPredicted RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 PSMD2Q13200 908 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 MUM1L1Q5H9M0 696 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 MICALL1Q8N3F8 863 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 JMYQ8N9B5 988 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 CCDC34Q96HJ3 373 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 SRRTQ9BXP5 876 aaKnown RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 NUCKS1Q9H1E3 243 aaKnown RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 KCNF1Q9H3M0 494 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 LRPPRCP42704 1394 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms