RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 ARID5AQ03989 594 aa9.24□□□□□ -0.93
SNX13-210ENST00000494402 ECM1Q16610 540 aa9.24□□□□□ -0.93
SNX13-210ENST00000494402 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
SNX13-210ENST00000494402 JAZF1Q86VZ6 243 aa9.24□□□□□ -0.93
SNX13-210ENST00000494402 ZBBXA8MT70 800 aa9.23□□□□□ -0.93
SNX13-210ENST00000494402 FBXO45P0C2W1 286 aa9.23□□□□□ -0.93
SNX13-210ENST00000494402 DNAJB2P25686 324 aa9.23□□□□□ -0.93
SNX13-210ENST00000494402 ZNF454Q8N9F8 522 aa9.23□□□□□ -0.93
SNX13-210ENST00000494402 GTF3C2Q8WUA4 911 aaPredicted RBP9.23□□□□□ -0.93
SNX13-210ENST00000494402 EYA1Q99502 592 aa9.23□□□□□ -0.93
SNX13-210ENST00000494402 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.23□□□□□ -0.93
SNX13-210ENST00000494402 FMNL1O95466 1100 aaPredicted RBP9.22□□□□□ -0.93
SNX13-210ENST00000494402 EMP3P54852 163 aa9.22□□□□□ -0.93
SNX13-210ENST00000494402 OGFOD1Q8N543 542 aa9.22□□□□□ -0.93
SNX13-210ENST00000494402 ZDHHC16Q969W1 377 aa9.22□□□□□ -0.93
SNX13-210ENST00000494402 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
SNX13-210ENST00000494402 POTEB3A0JP26 581 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 SORBS3O60504 671 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 TNNI2P48788 182 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 SETQ01105 290 aaPredicted RBP9.21□□□□□ -0.94
SNX13-210ENST00000494402 BMS1Q14692 1282 aaKnown RBP9.21□□□□□ -0.94
SNX13-210ENST00000494402 NFE2L2Q16236 605 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 OCLNQ16625 522 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 POTEBQ6S5H4 581 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 TRIM50Q86XT4 487 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.94
SNX13-210ENST00000494402 ZNF594Q96JF6 807 aaPredicted RBP9.21□□□□□ -0.94
SNX13-210ENST00000494402 UBA5Q9GZZ9 404 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 PARP2Q9UGN5 583 aa9.21□□□□□ -0.94
SNX13-210ENST00000494402 DMGDHQ9UI17 866 aaKnown RBP9.21□□□□□ -0.94
SNX13-210ENST00000494402 STK10O94804 968 aaKnown RBP9.2□□□□□ -0.94
SNX13-210ENST00000494402 ATP1A2P50993 1020 aa9.2□□□□□ -0.94
SNX13-210ENST00000494402 RALBP1Q15311 655 aa9.2□□□□□ -0.94
SNX13-210ENST00000494402 SLFNL1Q499Z3 407 aa9.2□□□□□ -0.94
SNX13-210ENST00000494402 TMC4Q7Z404 712 aa9.2□□□□□ -0.94
SNX13-210ENST00000494402 RBCK1Q9BYM8 510 aa9.2□□□□□ -0.94
SNX13-210ENST00000494402 PCDH12Q9NPG4 1184 aa9.2□□□□□ -0.94
SNX13-210ENST00000494402 VTI1BQ9UEU0 232 aa9.2□□□□□ -0.94
SNX13-210ENST00000494402 DNMT3AQ9Y6K1 912 aaPredicted RBP9.2□□□□□ -0.94
SNX13-210ENST00000494402 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 PRPF40AO75400 957 aaKnown RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 CENPBP07199 599 aaPredicted RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 HOXB1P14653 301 aaPredicted RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 GCGRP47871 477 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 GUCA2AQ02747 115 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 FMR1Q06787 632 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX13-210ENST00000494402 EML3Q32P44 896 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 PLEKHG6Q3KR16 790 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 SPTY2D1Q68D10 685 aaPredicted RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 TMC7Q7Z402 723 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 APBB1IPQ7Z5R6 666 aaPredicted RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 MRFAP1L1Q96HT8 127 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 PRIMPOLQ96LW4 560 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 FAM161BQ96MY7 647 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 TMEM134Q9H6X4 195 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 DNAAF2Q9NVR5 837 aaKnown RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 INPP5FQ9Y2H2 1132 aa9.19□□□□□ -0.94
SNX13-210ENST00000494402 MRPL42Q9Y6G3 142 aaKnown RBP9.19□□□□□ -0.94
SNX13-210ENST00000494402 C6orf229H3BNL8 230 aa9.18□□□□□ -0.94
SNX13-210ENST00000494402 LDHBP07195 334 aaKnown RBP9.18□□□□□ -0.94
SNX13-210ENST00000494402 PDE3BQ13370 1112 aa9.18□□□□□ -0.94
SNX13-210ENST00000494402 IRF2BPLQ9H1B7 796 aa9.18□□□□□ -0.94
SNX13-210ENST00000494402 IFT57Q9NWB7 429 aa9.18□□□□□ -0.94
SNX13-210ENST00000494402 U2SURPO15042 1029 aaKnown RBP9.17□□□□□ -0.94
SNX13-210ENST00000494402 MAFGO15525 162 aa9.17□□□□□ -0.94
SNX13-210ENST00000494402 PPP4R3BQ5MIZ7 849 aa9.17□□□□□ -0.94
SNX13-210ENST00000494402 VPS37DQ86XT2 251 aa9.17□□□□□ -0.94
SNX13-210ENST00000494402 PLPP7Q8NBV4 271 aa9.17□□□□□ -0.94
SNX13-210ENST00000494402 PMM1Q92871 262 aa9.17□□□□□ -0.94
SNX13-210ENST00000494402 DUSP9Q99956 384 aaKnown RBP9.17□□□□□ -0.94
SNX13-210ENST00000494402 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
SNX13-210ENST00000494402 TREHO43280 583 aa9.16□□□□□ -0.94
SNX13-210ENST00000494402 DNAJC6O75061 913 aa9.16□□□□□ -0.94
SNX13-210ENST00000494402 S100BP04271 92 aaPredicted RBP9.16□□□□□ -0.94
SNX13-210ENST00000494402 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
SNX13-210ENST00000494402 CLDN10P78369 228 aa9.16□□□□□ -0.94
SNX13-210ENST00000494402 DAB2P98082 770 aa9.16□□□□□ -0.94
SNX13-210ENST00000494402 PSMD2Q13200 908 aa9.16□□□□□ -0.94
SNX13-210ENST00000494402 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
SNX13-210ENST00000494402 CREB3O43889 395 aa9.15□□□□□ -0.94
SNX13-210ENST00000494402 SEC13P55735 322 aa9.15□□□□□ -0.94
SNX13-210ENST00000494402 MAP7D1Q3KQU3 841 aa9.15□□□□□ -0.94
SNX13-210ENST00000494402 CCDC146Q8IYE0 955 aa9.15□□□□□ -0.94
SNX13-210ENST00000494402 CCDC136Q96JN2 1154 aa9.15□□□□□ -0.94
SNX13-210ENST00000494402 SPC25Q9HBM1 224 aa9.15□□□□□ -0.94
SNX13-210ENST00000494402 SEPT3Q9UH03 358 aa9.15□□□□□ -0.94
SNX13-210ENST00000494402 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 ENPP3O14638 875 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 NDUFB5O43674 189 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 MTMR3Q13615 1198 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 SIX5Q8N196 739 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 HLA-CQ95604 372 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 GABBR1Q9UBS5 961 aa9.14□□□□□ -0.95
SNX13-210ENST00000494402 PER1O15534 1290 aaPredicted RBP9.13□□□□□ -0.95
SNX13-210ENST00000494402 ZNF654Q8IZM8 581 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms