RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MAN1A2O60476 641 aa4.56□□□□□ -1.68
LMNB1-207ENST00000494185 LARP1Q6PKG0 1096 aaKnown RBP4.56□□□□□ -1.68
LMNB1-207ENST00000494185 Q6ZVU0 165 aa4.56□□□□□ -1.68
LMNB1-207ENST00000494185 PLEKHM2Q8IWE5 1019 aa4.56□□□□□ -1.68
LMNB1-207ENST00000494185 UCN2Q96RP3 112 aa4.56□□□□□ -1.68
LMNB1-207ENST00000494185 PPP1R12CQ9BZL4 782 aa4.56□□□□□ -1.68
LMNB1-207ENST00000494185 ATP13A2Q9NQ11 1180 aa4.56□□□□□ -1.68
LMNB1-207ENST00000494185 PIK3CDO00329 1044 aa4.55□□□□□ -1.68
LMNB1-207ENST00000494185 GPC1P35052 558 aa4.55□□□□□ -1.68
LMNB1-207ENST00000494185 PDE4CQ08493 712 aa4.55□□□□□ -1.68
LMNB1-207ENST00000494185 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.55□□□□□ -1.682e-9■□□□□ 10.6
LMNB1-207ENST00000494185 PHTF2Q8N3S3 785 aa4.55□□□□□ -1.68
LMNB1-207ENST00000494185 ARID3AQ99856 593 aa4.55□□□□□ -1.68
LMNB1-207ENST00000494185 ZFAND3Q9H8U3 227 aa4.55□□□□□ -1.68
LMNB1-207ENST00000494185 POLMQ9NP87 494 aaPredicted RBP4.55□□□□□ -1.68
LMNB1-207ENST00000494185 AAASQ9NRG9 546 aa4.55□□□□□ -1.68
LMNB1-207ENST00000494185 USP17L3A6NCW0 530 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 USP17L4A6NCW7 530 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 PALM3A6NDB9 673 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-207ENST00000494185 C11orf95C9JLR9 678 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-207ENST00000494185 RELBQ01201 579 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 GNASQ5JWF2 1037 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 SLC27A3Q5K4L6 730 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 C6orf118Q5T5N4 469 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 USP17L2Q6R6M4 530 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 TBC1D9Q6ZT07 1266 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 USP17L1Q7RTZ2 530 aa4.54□□□□□ -1.68
LMNB1-207ENST00000494185 TFIP11Q9UBB9 837 aaKnown RBP4.54□□□□□ -1.68
LMNB1-207ENST00000494185 TTLL8A6PVC2 850 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 MEN1O00255 615 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 SPINT1O43278 529 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 LMOD1P29536 600 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-207ENST00000494185 PTGIRP43119 386 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 CLN3Q13286 438 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 NCOA4Q13772 614 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 TRIM47Q96LD4 638 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 CCDC85AQ96PX6 553 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-207ENST00000494185 PURBQ96QR8 312 aaKnown RBP4.53□□□□□ -1.68
LMNB1-207ENST00000494185 VRTNQ9H8Y1 702 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 TMPRSS4Q9NRS4 437 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 CHIC2Q9UKJ5 165 aa4.53□□□□□ -1.68
LMNB1-207ENST00000494185 MAFBQ9Y5Q3 323 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-207ENST00000494185 WASLO00401 505 aaPredicted RBP4.52□□□□□ -1.69
LMNB1-207ENST00000494185 ST8SIA5O15466 376 aa4.52□□□□□ -1.69
LMNB1-207ENST00000494185 BMP1P13497 986 aa4.52□□□□□ -1.69
LMNB1-207ENST00000494185 GTF2IP78347 998 aa4.52□□□□□ -1.69
LMNB1-207ENST00000494185 CFAP70Q5T0N1 1121 aa4.52□□□□□ -1.69
LMNB1-207ENST00000494185 TMEM214Q6NUQ4 689 aaKnown RBP4.52□□□□□ -1.69
LMNB1-207ENST00000494185 LARGE2Q8N3Y3 721 aa4.52□□□□□ -1.69
LMNB1-207ENST00000494185 SLC16A10Q8TF71 515 aa4.52□□□□□ -1.69
LMNB1-207ENST00000494185 KLF16Q9BXK1 252 aaPredicted RBP4.52□□□□□ -1.69
LMNB1-207ENST00000494185 ARHGEF10LQ9HCE6 1279 aa4.52□□□□□ -1.69
LMNB1-207ENST00000494185 ACIN1Q9UKV3 1341 aaKnown RBP4.51□□□□□ -1.69
LMNB1-207ENST00000494185 LILRA1O75019 489 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 PPP1R15AO75807 674 aaPredicted RBP4.51□□□□□ -1.69
LMNB1-207ENST00000494185 RFX1P22670 979 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 CBLBQ13191 982 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 TLR1Q15399 786 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 TSGA10IPQ3SY00 556 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 ZNF787Q6DD87 383 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 LYSMD3Q7Z3D4 306 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 NPAS3Q8IXF0 933 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 DEPDC4Q8N2C3 294 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 ZFP42Q96MM3 310 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 ESYT1Q9BSJ8 1104 aa4.51□□□□□ -1.69
LMNB1-207ENST00000494185 DNAAF2Q9NVR5 837 aaKnown RBP4.51□□□□□ -1.69
LMNB1-207ENST00000494185 MKRN1Q9UHC7 482 aaKnown RBP4.51□□□□□ -1.69
LMNB1-207ENST00000494185 FAM196BA6NMK8 535 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 RASA1P20936 1047 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 GDF10P55107 478 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 HIF1AQ16665 826 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 NBPF1Q3BBV0 1214 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 WDR44Q5JSH3 913 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 B4GALNT3Q6L9W6 998 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 FOXR1Q6PIV2 292 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 OGFOD1Q8N543 542 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 CNKSR1Q969H4 720 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 PBXIP1Q96AQ6 731 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 ZSCAN10Q96SZ4 725 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-207ENST00000494185 CDCA7Q9BWT1 371 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-207ENST00000494185 OSBPL3Q9H4L5 887 aa4.5□□□□□ -1.69
LMNB1-207ENST00000494185 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.5□□□□□ -1.692e-19■■■■■ 86.5
LMNB1-207ENST00000494185 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-207ENST00000494185 A0A1W2PRU2 124 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 M0R2N6 131 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 CSB-PGBD3P0DP91 1061 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 SCTRP47872 440 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 RNF144AP50876 292 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-207ENST00000494185 SEC13P55735 322 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 TAS1R3Q7RTX0 852 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 PGBD3Q8N328 593 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 GMCL1Q96IK5 515 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 ARXQ96QS3 562 aa4.49□□□□□ -1.69
LMNB1-207ENST00000494185 INSM2Q96T92 566 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-207ENST00000494185 GMPR2Q9P2T1 348 aaKnown RBP4.49□□□□□ -1.69
LMNB1-207ENST00000494185 H7C1W4 665 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 INHAP05111 366 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 TATP17735 454 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-207ENST00000494185 CCDC102BQ68D86 513 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 TRIM46Q7Z4K8 759 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms