RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 BTAF1O14981 1849 aa13.48□□□□□ -0.25
UFD1-210ENST00000494054 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
UFD1-210ENST00000494054 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
UFD1-210ENST00000494054 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
UFD1-210ENST00000494054 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
UFD1-210ENST00000494054 RAPGEF4Q8WZA2 1011 aa13.47□□□□□ -0.25
UFD1-210ENST00000494054 SPON1Q9HCB6 807 aa13.47□□□□□ -0.25
UFD1-210ENST00000494054 LRRC4BQ9NT99 713 aa13.47□□□□□ -0.25
UFD1-210ENST00000494054 STK32BQ9NY57 414 aa13.47□□□□□ -0.25
UFD1-210ENST00000494054 POLKQ9UBT6 870 aa13.47□□□□□ -0.25
UFD1-210ENST00000494054 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
UFD1-210ENST00000494054 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
UFD1-210ENST00000494054 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.25
UFD1-210ENST00000494054 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
UFD1-210ENST00000494054 SYTL4Q96C24 671 aaPredicted RBP13.46□□□□□ -0.25
UFD1-210ENST00000494054 NSD2O96028 1365 aa13.45□□□□□ -0.26
UFD1-210ENST00000494054 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
UFD1-210ENST00000494054 ZBTB7AO95365 584 aa13.45□□□□□ -0.26
UFD1-210ENST00000494054 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
UFD1-210ENST00000494054 KCNQ4P56696 695 aa13.44□□□□□ -0.26
UFD1-210ENST00000494054 EYA1Q99502 592 aa13.44□□□□□ -0.26
UFD1-210ENST00000494054 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
UFD1-210ENST00000494054 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
UFD1-210ENST00000494054 PAPPAQ13219 1627 aa13.43□□□□□ -0.26
UFD1-210ENST00000494054 CYP27B1O15528 508 aa13.43□□□□□ -0.26
UFD1-210ENST00000494054 NCAPD2Q15021 1401 aa13.43□□□□□ -0.26
UFD1-210ENST00000494054 ZNF827Q17R98 1081 aa13.43□□□□□ -0.26
UFD1-210ENST00000494054 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
UFD1-210ENST00000494054 PTGER2P43116 358 aa13.42□□□□□ -0.26
UFD1-210ENST00000494054 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
UFD1-210ENST00000494054 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
UFD1-210ENST00000494054 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
UFD1-210ENST00000494054 SLC27A3Q5K4L6 730 aa13.41□□□□□ -0.26
UFD1-210ENST00000494054 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
UFD1-210ENST00000494054 PPP1R1BQ9UD71 204 aaPredicted RBP13.41□□□□□ -0.26
UFD1-210ENST00000494054 KIF7Q2M1P5 1343 aa13.4□□□□□ -0.26
UFD1-210ENST00000494054 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
UFD1-210ENST00000494054 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
UFD1-210ENST00000494054 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
UFD1-210ENST00000494054 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
UFD1-210ENST00000494054 CCNL1Q9UK58 526 aaPredicted RBP13.38□□□□□ -0.27
UFD1-210ENST00000494054 KNSTRNQ9Y448 316 aa13.38□□□□□ -0.27
UFD1-210ENST00000494054 LY75O60449 1722 aa13.38□□□□□ -0.27
UFD1-210ENST00000494054 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
UFD1-210ENST00000494054 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
UFD1-210ENST00000494054 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
UFD1-210ENST00000494054 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
UFD1-210ENST00000494054 PNPLA7Q6ZV29 1317 aa13.37□□□□□ -0.27
UFD1-210ENST00000494054 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
UFD1-210ENST00000494054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.27
UFD1-210ENST00000494054 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
UFD1-210ENST00000494054 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
UFD1-210ENST00000494054 PHKG2P15735 406 aa13.35□□□□□ -0.27
UFD1-210ENST00000494054 PIGBQ92521 554 aa13.35□□□□□ -0.27
UFD1-210ENST00000494054 TFCP2L1Q9NZI6 479 aa13.35□□□□□ -0.27
UFD1-210ENST00000494054 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
UFD1-210ENST00000494054 PALLDQ8WX93 1383 aa13.33□□□□□ -0.27
UFD1-210ENST00000494054 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
UFD1-210ENST00000494054 FHDC1Q9C0D6 1143 aaPredicted RBP13.33□□□□□ -0.28
UFD1-210ENST00000494054 ITGB4P16144 1822 aa13.33□□□□□ -0.28
UFD1-210ENST00000494054 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
UFD1-210ENST00000494054 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
UFD1-210ENST00000494054 ARXQ96QS3 562 aa13.32□□□□□ -0.28
UFD1-210ENST00000494054 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
UFD1-210ENST00000494054 QSER1Q2KHR3 1735 aa13.31□□□□□ -0.28
UFD1-210ENST00000494054 IL13P35225 146 aa13.31□□□□□ -0.28
UFD1-210ENST00000494054 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
UFD1-210ENST00000494054 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
UFD1-210ENST00000494054 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
UFD1-210ENST00000494054 TMOD3Q9NYL9 352 aa13.3□□□□□ -0.28
UFD1-210ENST00000494054 ASAP1Q9ULH1 1129 aa13.3□□□□□ -0.28
UFD1-210ENST00000494054 C5P01031 1676 aa13.29□□□□□ -0.28
UFD1-210ENST00000494054 MTHFSP49914 203 aa13.29□□□□□ -0.28
UFD1-210ENST00000494054 PLEKHO1Q53GL0 409 aaPredicted RBP13.29□□□□□ -0.28
UFD1-210ENST00000494054 SULT6B1Q6IMI4 303 aa13.29□□□□□ -0.28
UFD1-210ENST00000494054 PLEKHG2Q9H7P9 1386 aa13.29□□□□□ -0.28
UFD1-210ENST00000494054 MSH5O43196 834 aa13.28□□□□□ -0.28
UFD1-210ENST00000494054 ZNF530Q6P9A1 599 aaPredicted RBP13.28□□□□□ -0.28
UFD1-210ENST00000494054 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
UFD1-210ENST00000494054 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
UFD1-210ENST00000494054 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
UFD1-210ENST00000494054 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.28
UFD1-210ENST00000494054 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.28
UFD1-210ENST00000494054 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
UFD1-210ENST00000494054 POLD1P28340 1107 aa13.27□□□□□ -0.29
UFD1-210ENST00000494054 SIK1P57059 783 aa13.27□□□□□ -0.29
UFD1-210ENST00000494054 ITPK1Q13572 414 aa13.27□□□□□ -0.29
UFD1-210ENST00000494054 CNGB1Q14028 1251 aaPredicted RBP13.27□□□□□ -0.29
UFD1-210ENST00000494054 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
UFD1-210ENST00000494054 KDRP35968 1356 aa13.27□□□□□ -0.29
UFD1-210ENST00000494054 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
UFD1-210ENST00000494054 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
UFD1-210ENST00000494054 KDM6AO15550 1401 aaPredicted RBP13.26□□□□□ -0.29
UFD1-210ENST00000494054 MSL1Q68DK7 614 aa13.26□□□□□ -0.29
UFD1-210ENST00000494054 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
UFD1-210ENST00000494054 DCAF5Q96JK2 942 aa13.26□□□□□ -0.29
UFD1-210ENST00000494054 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
UFD1-210ENST00000494054 MAP3K5Q99683 1374 aa13.25□□□□□ -0.29
UFD1-210ENST00000494054 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
UFD1-210ENST00000494054 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms