RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
UBA3-211ENST00000493957 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
UBA3-211ENST00000493957 SHANK3Q9BYB0 1731 aa15.97■□□□□ 0.15
UBA3-211ENST00000493957 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
UBA3-211ENST00000493957 HSP90AB2PQ58FF8 381 aa15.97■□□□□ 0.15
UBA3-211ENST00000493957 CARD10Q9BWT7 1032 aa15.97■□□□□ 0.15
UBA3-211ENST00000493957 FLT4P35916 1363 aa15.97■□□□□ 0.15
UBA3-211ENST00000493957 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
UBA3-211ENST00000493957 KRT27Q7Z3Y8 459 aa15.96■□□□□ 0.15
UBA3-211ENST00000493957 UPF1Q92900 1129 aaKnown RBP eCLIP15.96■□□□□ 0.15
UBA3-211ENST00000493957 NLRP2Q9NX02 1062 aa15.96■□□□□ 0.15
UBA3-211ENST00000493957 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
UBA3-211ENST00000493957 TNS1Q9HBL0 1735 aaKnown RBP15.96■□□□□ 0.15
UBA3-211ENST00000493957 KAT6BQ8WYB5 2073 aa15.95■□□□□ 0.14
UBA3-211ENST00000493957 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
UBA3-211ENST00000493957 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
UBA3-211ENST00000493957 THRAP3Q9Y2W1 955 aaKnown RBP15.95■□□□□ 0.14
UBA3-211ENST00000493957 INSRP06213 1382 aa15.95■□□□□ 0.14
UBA3-211ENST00000493957 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
UBA3-211ENST00000493957 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
UBA3-211ENST00000493957 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
UBA3-211ENST00000493957 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
UBA3-211ENST00000493957 NBPF6Q5VWK0 638 aa15.92■□□□□ 0.14
UBA3-211ENST00000493957 NBPF4Q96M43 638 aa15.92■□□□□ 0.14
UBA3-211ENST00000493957 MEGF6O75095 1541 aa15.91■□□□□ 0.14
UBA3-211ENST00000493957 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
UBA3-211ENST00000493957 TNS2Q63HR2 1409 aa15.9■□□□□ 0.14
UBA3-211ENST00000493957 PKD1L3Q7Z443 1732 aa15.88■□□□□ 0.13
UBA3-211ENST00000493957 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
UBA3-211ENST00000493957 DDB1Q16531 1140 aa15.88■□□□□ 0.13
UBA3-211ENST00000493957 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
UBA3-211ENST00000493957 IL2RBP14784 551 aa15.87■□□□□ 0.13
UBA3-211ENST00000493957 PDE3BQ13370 1112 aa15.87■□□□□ 0.13
UBA3-211ENST00000493957 EIF4A2Q14240 407 aaKnown RBP15.87■□□□□ 0.13
UBA3-211ENST00000493957 MARCH10Q8NA82 808 aaPredicted RBP15.87■□□□□ 0.13
UBA3-211ENST00000493957 ZBTB22O15209 634 aa15.86■□□□□ 0.13
UBA3-211ENST00000493957 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
UBA3-211ENST00000493957 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
UBA3-211ENST00000493957 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
UBA3-211ENST00000493957 EYA1Q99502 592 aa15.85■□□□□ 0.13
UBA3-211ENST00000493957 OVOS2A0A0G2JMS6 1433 aa15.85■□□□□ 0.13
UBA3-211ENST00000493957 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
UBA3-211ENST00000493957 NHSQ6T4R5 1651 aa15.84■□□□□ 0.13
UBA3-211ENST00000493957 MTHFSP49914 203 aa15.84■□□□□ 0.13
UBA3-211ENST00000493957 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.12
UBA3-211ENST00000493957 EXOC5O00471 708 aa15.83■□□□□ 0.12
UBA3-211ENST00000493957 SSUH2Q9Y2M2 353 aa15.83■□□□□ 0.12
UBA3-211ENST00000493957 BTAF1O14981 1849 aa15.82■□□□□ 0.12
UBA3-211ENST00000493957 TRIM37O94972 964 aa15.82■□□□□ 0.12
UBA3-211ENST00000493957 FAM196AQ6ZSG2 479 aa15.82■□□□□ 0.12
UBA3-211ENST00000493957 PTF1AQ7RTS3 328 aa15.82■□□□□ 0.12
UBA3-211ENST00000493957 DEFB132Q7Z7B7 95 aa15.82■□□□□ 0.12
UBA3-211ENST00000493957 TOGARAM1Q9Y4F4 1720 aa15.82■□□□□ 0.12
UBA3-211ENST00000493957 ITGB4P16144 1822 aa15.82■□□□□ 0.12
UBA3-211ENST00000493957 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
UBA3-211ENST00000493957 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
UBA3-211ENST00000493957 IL13P35225 146 aa15.8■□□□□ 0.12
UBA3-211ENST00000493957 RREB1Q92766 1687 aa15.79■□□□□ 0.12
UBA3-211ENST00000493957 PPP2R1AP30153 589 aa15.79■□□□□ 0.12
UBA3-211ENST00000493957 AEBP1Q8IUX7 1158 aa15.79■□□□□ 0.12
UBA3-211ENST00000493957 RAPGEF4Q8WZA2 1011 aa15.79■□□□□ 0.12
UBA3-211ENST00000493957 PARD3Q8TEW0 1356 aa15.78■□□□□ 0.12
UBA3-211ENST00000493957 NUP188Q5SRE5 1749 aa15.78■□□□□ 0.12
UBA3-211ENST00000493957 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
UBA3-211ENST00000493957 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
UBA3-211ENST00000493957 DDX54Q8TDD1 881 aaKnown RBP15.78■□□□□ 0.12
UBA3-211ENST00000493957 BCL9O00512 1426 aa15.77■□□□□ 0.12
UBA3-211ENST00000493957 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
UBA3-211ENST00000493957 ZCRB1Q8TBF4 217 aaKnown RBP15.77■□□□□ 0.12
UBA3-211ENST00000493957 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
UBA3-211ENST00000493957 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.11
UBA3-211ENST00000493957 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.11
UBA3-211ENST00000493957 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
UBA3-211ENST00000493957 KCNQ2O43526 872 aa15.76■□□□□ 0.11
UBA3-211ENST00000493957 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
UBA3-211ENST00000493957 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
UBA3-211ENST00000493957 CYP27B1O15528 508 aa15.74■□□□□ 0.11
UBA3-211ENST00000493957 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
UBA3-211ENST00000493957 KDRP35968 1356 aa15.74■□□□□ 0.11
UBA3-211ENST00000493957 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
UBA3-211ENST00000493957 APBA3O96018 575 aa15.73■□□□□ 0.11
UBA3-211ENST00000493957 HMOX1P09601 288 aa15.73■□□□□ 0.11
UBA3-211ENST00000493957 SCN11AQ9UI33 1791 aa15.72■□□□□ 0.11
UBA3-211ENST00000493957 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
UBA3-211ENST00000493957 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
UBA3-211ENST00000493957 BAG6P46379 1132 aa15.72■□□□□ 0.11
UBA3-211ENST00000493957 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
UBA3-211ENST00000493957 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.11
UBA3-211ENST00000493957 LY75O60449 1722 aa15.71■□□□□ 0.1
UBA3-211ENST00000493957 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
UBA3-211ENST00000493957 POTEIP0CG38 1075 aa15.7■□□□□ 0.1
UBA3-211ENST00000493957 CAMKK2Q96RR4 588 aa15.7■□□□□ 0.1
UBA3-211ENST00000493957 SPG7Q9UQ90 795 aa15.69■□□□□ 0.1
UBA3-211ENST00000493957 DLG5Q8TDM6 1919 aa15.68■□□□□ 0.1
UBA3-211ENST00000493957 PRIM1P49642 420 aaKnown RBP15.68■□□□□ 0.1
UBA3-211ENST00000493957 PHKG2P15735 406 aa15.67■□□□□ 0.1
UBA3-211ENST00000493957 SYTL4Q96C24 671 aaPredicted RBP15.67■□□□□ 0.1
UBA3-211ENST00000493957 CFAP53Q96M91 514 aa15.67■□□□□ 0.1
UBA3-211ENST00000493957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.11e-8■■■□□ 18.2
UBA3-211ENST00000493957 TAF1LQ8IZX4 1826 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms