RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CCDC102BQ68D86 513 aa10.44□□□□□ -0.74
SMC2-205ENST00000493955 PCDHB11Q9Y5F2 797 aa10.44□□□□□ -0.74
SMC2-205ENST00000493955 LCE2BO14633 110 aa10.43□□□□□ -0.74
SMC2-205ENST00000493955 GFRA3O60609 400 aa10.43□□□□□ -0.74
SMC2-205ENST00000493955 PSME1Q06323 249 aa10.43□□□□□ -0.74
SMC2-205ENST00000493955 USP4Q13107 963 aa10.43□□□□□ -0.74
SMC2-205ENST00000493955 TPCN2Q8NHX9 752 aa10.43□□□□□ -0.74
SMC2-205ENST00000493955 C1orf216Q8TAB5 229 aa10.43□□□□□ -0.74
SMC2-205ENST00000493955 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
SMC2-205ENST00000493955 PCDHGA11Q9Y5H2 935 aa10.42□□□□□ -0.74
SMC2-205ENST00000493955 ZBTB24O43167 697 aaPredicted RBP10.41□□□□□ -0.74
SMC2-205ENST00000493955 AMOTL2Q9Y2J4 779 aa10.41□□□□□ -0.74
SMC2-205ENST00000493955 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
SMC2-205ENST00000493955 PRMT3O60678 531 aa10.4□□□□□ -0.75
SMC2-205ENST00000493955 SERPINB4P48594 390 aa10.4□□□□□ -0.75
SMC2-205ENST00000493955 TRIM32Q13049 653 aa10.4□□□□□ -0.75
SMC2-205ENST00000493955 KCTD15Q96SI1 283 aaPredicted RBP10.4□□□□□ -0.75
SMC2-205ENST00000493955 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
SMC2-205ENST00000493955 SFI1A8K8P3 1242 aa10.39□□□□□ -0.75
SMC2-205ENST00000493955 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
SMC2-205ENST00000493955 OCLNQ16625 522 aa10.39□□□□□ -0.75
SMC2-205ENST00000493955 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
SMC2-205ENST00000493955 MYCP01106 439 aaPredicted RBP10.38□□□□□ -0.75
SMC2-205ENST00000493955 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
SMC2-205ENST00000493955 RAB15P59190 212 aa10.38□□□□□ -0.75
SMC2-205ENST00000493955 MAP4K5Q9Y4K4 846 aa10.38□□□□□ -0.75
SMC2-205ENST00000493955 WNT7BP56706 349 aa10.37□□□□□ -0.75
SMC2-205ENST00000493955 ANKLE1Q8NAG6 615 aa10.37□□□□□ -0.75
SMC2-205ENST00000493955 RNF223E7ERA6 249 aa10.36□□□□□ -0.75
SMC2-205ENST00000493955 SCNN1AP37088 669 aa10.36□□□□□ -0.75
SMC2-205ENST00000493955 PRIMPOLQ96LW4 560 aa10.36□□□□□ -0.75
SMC2-205ENST00000493955 GGCXP38435 758 aa10.35□□□□□ -0.75
SMC2-205ENST00000493955 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
SMC2-205ENST00000493955 VASH1Q7L8A9 365 aaPredicted RBP10.35□□□□□ -0.75
SMC2-205ENST00000493955 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
SMC2-205ENST00000493955 M0R2N6 131 aa10.34□□□□□ -0.75
SMC2-205ENST00000493955 SKOR1P84550 965 aa10.34□□□□□ -0.75
SMC2-205ENST00000493955 PLA2G2CQ5R387 149 aa10.34□□□□□ -0.75
SMC2-205ENST00000493955 HINFPQ9BQA5 517 aa10.34□□□□□ -0.75
SMC2-205ENST00000493955 ERVH48-1M5A8F1 160 aa10.33□□□□□ -0.76
SMC2-205ENST00000493955 ERCC3P19447 782 aa10.33□□□□□ -0.76
SMC2-205ENST00000493955 SCTRP47872 440 aa10.33□□□□□ -0.76
SMC2-205ENST00000493955 TSEN2Q8NCE0 465 aaKnown RBP10.33□□□□□ -0.76
SMC2-205ENST00000493955 PRKD2Q9BZL6 878 aa10.33□□□□□ -0.76
SMC2-205ENST00000493955 EGFL7Q9UHF1 273 aa10.33□□□□□ -0.76
SMC2-205ENST00000493955 E9PSI1 815 aa10.32□□□□□ -0.76
SMC2-205ENST00000493955 ESF1Q9H501 851 aaKnown RBP10.32□□□□□ -0.76
SMC2-205ENST00000493955 BIN2Q9UBW5 565 aaPredicted RBP10.32□□□□□ -0.76
SMC2-205ENST00000493955 WEE1P30291 646 aa10.31□□□□□ -0.76
SMC2-205ENST00000493955 RPIAP49247 311 aa10.31□□□□□ -0.76
SMC2-205ENST00000493955 ERVK-9P63128 1117 aa10.31□□□□□ -0.76
SMC2-205ENST00000493955 DNAJC14Q6Y2X3 702 aaPredicted RBP10.31□□□□□ -0.76
SMC2-205ENST00000493955 EHBP1Q8NDI1 1231 aa10.31□□□□□ -0.76
SMC2-205ENST00000493955 NRG2O14511 850 aaPredicted RBP10.3□□□□□ -0.76
SMC2-205ENST00000493955 LGR5O75473 907 aa10.3□□□□□ -0.76
SMC2-205ENST00000493955 ABL1P00519 1130 aa10.3□□□□□ -0.76
SMC2-205ENST00000493955 CC2D2BQ6DHV5 1058 aa10.3□□□□□ -0.76
SMC2-205ENST00000493955 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMC2-205ENST00000493955 TRIM52Q96A61 297 aa10.3□□□□□ -0.76
SMC2-205ENST00000493955 ZNF358Q9NW07 568 aa10.3□□□□□ -0.76
SMC2-205ENST00000493955 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
SMC2-205ENST00000493955 CDK15Q96Q40 435 aa10.29□□□□□ -0.76
SMC2-205ENST00000493955 H3BRB1 525 aa10.28□□□□□ -0.76
SMC2-205ENST00000493955 FSHRP23945 695 aa10.28□□□□□ -0.76
SMC2-205ENST00000493955 ZNF211Q13398 564 aaPredicted RBP10.28□□□□□ -0.76
SMC2-205ENST00000493955 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
SMC2-205ENST00000493955 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
SMC2-205ENST00000493955 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
SMC2-205ENST00000493955 DHX9Q08211 1270 aaKnown RBP10.27□□□□□ -0.77
SMC2-205ENST00000493955 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.77
SMC2-205ENST00000493955 MKNK1Q9BUB5 465 aa10.27□□□□□ -0.77
SMC2-205ENST00000493955 WASLO00401 505 aaPredicted RBP10.26□□□□□ -0.77
SMC2-205ENST00000493955 ICMTO60725 284 aa10.26□□□□□ -0.77
SMC2-205ENST00000493955 GLYCTKQ8IVS8 523 aa10.26□□□□□ -0.77
SMC2-205ENST00000493955 OSBPL3Q9H4L5 887 aa10.26□□□□□ -0.77
SMC2-205ENST00000493955 RBM47A0AV96 593 aaKnown RBP10.25□□□□□ -0.77
SMC2-205ENST00000493955 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
SMC2-205ENST00000493955 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
SMC2-205ENST00000493955 SCNN1DP51172 638 aa10.25□□□□□ -0.77
SMC2-205ENST00000493955 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
SMC2-205ENST00000493955 PPP1R18Q6NYC8 613 aa10.25□□□□□ -0.77
SMC2-205ENST00000493955 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
SMC2-205ENST00000493955 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
SMC2-205ENST00000493955 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.25□□□□□ -0.77
SMC2-205ENST00000493955 SEPT3Q9UH03 358 aa10.25□□□□□ -0.77
SMC2-205ENST00000493955 BACH1O14867 736 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 C21orf2O43822 256 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 IGFBP4P22692 258 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 GDF10P55107 478 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 ZNF787Q6DD87 383 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 MPNDQ8N594 471 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 ANO2Q9NQ90 1003 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 TMPRSS4Q9NRS4 437 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 TLL2Q9Y6L7 1015 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 FOXO3O43524 673 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 GRM5P41594 1212 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
SMC2-205ENST00000493955 COL26A1Q96A83 441 aa10.24□□□□□ -0.77
SMC2-205ENST00000493955 PURBQ96QR8 312 aaKnown RBP10.24□□□□□ -0.77
SMC2-205ENST00000493955 SF3B2Q13435 895 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms