RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SERPINB4P48594 390 aa7.03□□□□□ -1.28
GTF3A-208ENST00000493903 WNT7BP56706 349 aa7.03□□□□□ -1.28
GTF3A-208ENST00000493903 NBPF14Q5TI25 921 aa7.03□□□□□ -1.28
GTF3A-208ENST00000493903 LARGE2Q8N3Y3 721 aa7.03□□□□□ -1.28
GTF3A-208ENST00000493903 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
GTF3A-208ENST00000493903 ZNF511Q8NB15 262 aa7.03□□□□□ -1.28
GTF3A-208ENST00000493903 WNT7AO00755 349 aa7.02□□□□□ -1.29
GTF3A-208ENST00000493903 VAMP1P23763 118 aa7.02□□□□□ -1.29
GTF3A-208ENST00000493903 DPYDQ12882 1025 aa7.02□□□□□ -1.29
GTF3A-208ENST00000493903 NOM1Q5C9Z4 860 aaKnown RBP7.02□□□□□ -1.29
GTF3A-208ENST00000493903 RC3H1Q5TC82 1133 aaKnown RBP7.02□□□□□ -1.29
GTF3A-208ENST00000493903 MRGPRX2Q96LB1 330 aa7.02□□□□□ -1.29
GTF3A-208ENST00000493903 DNAAF2Q9NVR5 837 aaKnown RBP7.02□□□□□ -1.29
GTF3A-208ENST00000493903 NOD1Q9Y239 953 aa7.02□□□□□ -1.29
GTF3A-208ENST00000493903 PCDHB9Q9Y5E1 797 aa7.02□□□□□ -1.29
GTF3A-208ENST00000493903 PRR20EP86478 221 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 PRR20CP86479 221 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 PRR20DP86480 221 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 PRR20BP86481 221 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 PRR20AP86496 221 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
GTF3A-208ENST00000493903 TRAF7Q6Q0C0 670 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 TAS1R3Q7RTX0 852 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 SIX5Q8N196 739 aa7.01□□□□□ -1.29
GTF3A-208ENST00000493903 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
GTF3A-208ENST00000493903 HMGB1P09429 215 aaKnown RBP7□□□□□ -1.29
GTF3A-208ENST00000493903 CLDN10P78369 228 aa7□□□□□ -1.29
GTF3A-208ENST00000493903 NPAS4Q8IUM7 802 aa7□□□□□ -1.29
GTF3A-208ENST00000493903 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
GTF3A-208ENST00000493903 GIPC2Q8TF65 315 aa7□□□□□ -1.29
GTF3A-208ENST00000493903 FOXJ1Q92949 421 aa7□□□□□ -1.29
GTF3A-208ENST00000493903 ANKRD33BA6NCL7 494 aa6.99□□□□□ -1.29
GTF3A-208ENST00000493903 NRG2O14511 850 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-208ENST00000493903 TCF3P15923 654 aa6.99□□□□□ -1.29
GTF3A-208ENST00000493903 OCSTAMPQ9BR26 566 aa6.99□□□□□ -1.29
GTF3A-208ENST00000493903 RBM19Q9Y4C8 960 aaKnown RBP6.99□□□□□ -1.29
GTF3A-208ENST00000493903 SEC13P55735 322 aa6.98□□□□□ -1.29
GTF3A-208ENST00000493903 AGERQ15109 404 aa6.98□□□□□ -1.29
GTF3A-208ENST00000493903 C4orf48Q5BLP8 95 aa6.98□□□□□ -1.29
GTF3A-208ENST00000493903 CYP4X1Q8N118 509 aa6.98□□□□□ -1.29
GTF3A-208ENST00000493903 ZNF594Q96JF6 807 aaPredicted RBP6.98□□□□□ -1.29
GTF3A-208ENST00000493903 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
GTF3A-208ENST00000493903 ZBTB7BO15156 539 aaPredicted RBP6.97□□□□□ -1.29
GTF3A-208ENST00000493903 ICMTO60725 284 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 DKK1O94907 266 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 COL19A1Q14993 1142 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 LAPTM4AQ15012 233 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 OCLNQ16625 522 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 SH3BP5LQ7L8J4 393 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 ADAM32Q8TC27 787 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 ARHGAP9Q9BRR9 750 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 BCL11AQ9H165 835 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 TOR4AQ9NXH8 423 aa6.97□□□□□ -1.29
GTF3A-208ENST00000493903 TTC24A2A3L6 582 aaPredicted RBP6.96□□□□□ -1.3
GTF3A-208ENST00000493903 SIAH2O43255 324 aa6.96□□□□□ -1.3
GTF3A-208ENST00000493903 SH3RF1Q7Z6J0 888 aa6.96□□□□□ -1.3
GTF3A-208ENST00000493903 ZBTB33Q86T24 672 aa6.96□□□□□ -1.3
GTF3A-208ENST00000493903 BPHLQ86WA6 291 aaPredicted RBP6.96□□□□□ -1.3
GTF3A-208ENST00000493903 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.3
GTF3A-208ENST00000493903 DOLKQ9UPQ8 538 aa6.96□□□□□ -1.3
GTF3A-208ENST00000493903 TLL2Q9Y6L7 1015 aa6.96□□□□□ -1.3
GTF3A-208ENST00000493903 MAGEB6P1A0A0J9YX57 407 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 FAM187AA6NFU0 413 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 J3QL48 77 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 VARSP26640 1264 aaKnown RBP6.95□□□□□ -1.3
GTF3A-208ENST00000493903 GTF2IP78347 998 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 RNF20Q5VTR2 975 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 FBXO33Q7Z6M2 555 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 CCDC125Q86Z20 511 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 ASB16Q96NS5 453 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 CARD14Q9BXL6 1004 aa6.95□□□□□ -1.3
GTF3A-208ENST00000493903 H3BRB1 525 aa6.94□□□□□ -1.3
GTF3A-208ENST00000493903 C21orf2O43822 256 aa6.94□□□□□ -1.3
GTF3A-208ENST00000493903 PRMT3O60678 531 aa6.94□□□□□ -1.3
GTF3A-208ENST00000493903 ABL1P00519 1130 aa6.94□□□□□ -1.3
GTF3A-208ENST00000493903 SF3B2Q13435 895 aaKnown RBP6.94□□□□□ -1.3
GTF3A-208ENST00000493903 CCDC102BQ68D86 513 aa6.94□□□□□ -1.3
GTF3A-208ENST00000493903 Q6ZNB5 142 aa6.94□□□□□ -1.3
GTF3A-208ENST00000493903 DZIP3Q86Y13 1208 aaKnown RBP6.94□□□□□ -1.3
GTF3A-208ENST00000493903 GLYCTKQ8IVS8 523 aa6.94□□□□□ -1.3
GTF3A-208ENST00000493903 TUT1Q9H6E5 874 aaKnown RBP6.94□□□□□ -1.3
GTF3A-208ENST00000493903 ALDH1A1P00352 501 aa6.93□□□□□ -1.3
GTF3A-208ENST00000493903 PKDCCQ504Y2 493 aa6.93□□□□□ -1.3
GTF3A-208ENST00000493903 ZSCAN29Q8IWY8 852 aaPredicted RBP6.93□□□□□ -1.3
GTF3A-208ENST00000493903 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
GTF3A-208ENST00000493903 DCTN4Q9UJW0 460 aa6.93□□□□□ -1.3
GTF3A-208ENST00000493903 KIAA1024Q9UPX6 916 aa6.93□□□□□ -1.3
GTF3A-208ENST00000493903 M0R2N6 131 aa6.92□□□□□ -1.3
GTF3A-208ENST00000493903 SMPD1P17405 629 aa6.92□□□□□ -1.3
GTF3A-208ENST00000493903 SCNN1AP37088 669 aa6.92□□□□□ -1.3
GTF3A-208ENST00000493903 FKBP4Q02790 459 aaKnown RBP eCLIP6.92□□□□□ -1.3
GTF3A-208ENST00000493903 TSGA10IPQ3SY00 556 aa6.92□□□□□ -1.3
GTF3A-208ENST00000493903 PRIMPOLQ96LW4 560 aa6.92□□□□□ -1.3
GTF3A-208ENST00000493903 PUS7Q96PZ0 661 aaKnown RBP6.92□□□□□ -1.3
GTF3A-208ENST00000493903 C1QTNF2Q9BXJ5 285 aa6.92□□□□□ -1.3
GTF3A-208ENST00000493903 PTCD1O75127 700 aaKnown RBP6.91□□□□□ -1.3
GTF3A-208ENST00000493903 DGAT1O75907 488 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
GTF3A-208ENST00000493903 MAPK1P28482 360 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms