RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 SULT6B1Q6IMI4 303 aa9.31□□□□□ -0.92
SMARCE1-211ENST00000493660 WWC1Q8IX03 1113 aa9.31□□□□□ -0.92
SMARCE1-211ENST00000493660 EYA1Q99502 592 aa9.31□□□□□ -0.92
SMARCE1-211ENST00000493660 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
SMARCE1-211ENST00000493660 HSP90AA1P07900 732 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-211ENST00000493660 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-211ENST00000493660 IL16Q14005 1332 aa9.3□□□□□ -0.92
SMARCE1-211ENST00000493660 E9PSI1 815 aa9.3□□□□□ -0.92
SMARCE1-211ENST00000493660 LMOD3Q0VAK6 560 aa9.3□□□□□ -0.92
SMARCE1-211ENST00000493660 CERKQ8TCT0 537 aa9.3□□□□□ -0.92
SMARCE1-211ENST00000493660 KIAA0232Q92628 1395 aa9.3□□□□□ -0.92
SMARCE1-211ENST00000493660 SLFN5Q08AF3 891 aa9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 GSE1Q14687 1217 aa9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 TRMT2AQ8IZ69 625 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 LRRC37A3O60309 1634 aa9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 VIRMAQ69YN4 1812 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 PARP4Q9UKK3 1724 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 ERBB3P21860 1342 aa9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 ZC3H6P61129 1189 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 ANKRD24Q8TF21 1146 aa9.29□□□□□ -0.92
SMARCE1-211ENST00000493660 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 RIPK4P57078 832 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 AEBP1Q8IUX7 1158 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 CABLES1Q8TDN4 633 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 PKD1L3Q7Z443 1732 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 PLCH1Q4KWH8 1693 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 ZBTB7CA1YPR0 619 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 PHACTR3Q96KR7 559 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 RRP7AQ9Y3A4 280 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-211ENST00000493660 NWD2Q9ULI1 1742 aa9.27□□□□□ -0.92
SMARCE1-211ENST00000493660 COL5A2P05997 1499 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-211ENST00000493660 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
SMARCE1-211ENST00000493660 HAP1P54257 671 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-211ENST00000493660 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
SMARCE1-211ENST00000493660 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.93
SMARCE1-211ENST00000493660 LTV1Q96GA3 475 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-211ENST00000493660 AXIN2Q9Y2T1 843 aa9.27□□□□□ -0.93
SMARCE1-211ENST00000493660 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 NBPF6Q5VWK0 638 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 NBPF4Q96M43 638 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 PRDM11Q9NQV5 511 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 WNK3Q9BYP7 1800 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 NRAPQ86VF7 1730 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 MYH16Q9H6N6 1097 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 PRDM4Q9UKN5 801 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 ADAMTS7Q9UKP4 1686 aa9.26□□□□□ -0.93
SMARCE1-211ENST00000493660 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
SMARCE1-211ENST00000493660 NAP1L2Q9ULW6 460 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-211ENST00000493660 RNF123Q5XPI4 1314 aa9.24□□□□□ -0.93
SMARCE1-211ENST00000493660 WDR17Q8IZU2 1322 aa9.24□□□□□ -0.93
SMARCE1-211ENST00000493660 OVOS2A0A0G2JMS6 1433 aa9.24□□□□□ -0.93
SMARCE1-211ENST00000493660 CHRNA2Q15822 529 aa9.24□□□□□ -0.93
SMARCE1-211ENST00000493660 AMOTQ4VCS5 1084 aa9.24□□□□□ -0.93
SMARCE1-211ENST00000493660 JCADQ9P266 1359 aa9.24□□□□□ -0.93
SMARCE1-211ENST00000493660 CT47B1P0C2W7 299 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-211ENST00000493660 MAP3K5Q99683 1374 aa9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 SIPA1L3O60292 1781 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 SCN11AQ9UI33 1791 aa9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 C1QBPQ07021 282 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 MTHFSDQ2M296 383 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 PLEKHO1Q53GL0 409 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 IPO4Q8TEX9 1081 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 SPINK5Q9NQ38 1064 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 IFT57Q9NWB7 429 aa9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 RCAN3Q9UKA8 241 aa9.23□□□□□ -0.93
SMARCE1-211ENST00000493660 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 GNAI1P63096 354 aa9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 USHBP1Q8N6Y0 703 aa9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.22□□□□□ -0.935e-7■■□□□ 13.2
SMARCE1-211ENST00000493660 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 NLRP2Q9NX02 1062 aa9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 SHANK3Q9BYB0 1731 aa9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 CRB1P82279 1406 aa9.22□□□□□ -0.93
SMARCE1-211ENST00000493660 FAM83GA6ND36 823 aa9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 GNAT3A8MTJ3 354 aa9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 ZNF853P0CG23 659 aa9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 NAP1L5Q96NT1 182 aaPredicted RBP9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 CARD10Q9BWT7 1032 aa9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 MEGF6O75095 1541 aa9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 KDM3BQ7LBC6 1761 aa9.21□□□□□ -0.93
SMARCE1-211ENST00000493660 TATP17735 454 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-211ENST00000493660 RAPGEF4Q8WZA2 1011 aa9.21□□□□□ -0.94
SMARCE1-211ENST00000493660 CFAP44Q96MT7 982 aa9.21□□□□□ -0.94
SMARCE1-211ENST00000493660 SPATA31A6Q5VVP1 1343 aa9.21□□□□□ -0.94
SMARCE1-211ENST00000493660 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
SMARCE1-211ENST00000493660 BABAM1Q9NWV8 329 aa9.2□□□□□ -0.94
SMARCE1-211ENST00000493660 CEMIPQ8WUJ3 1361 aa9.2□□□□□ -0.94
SMARCE1-211ENST00000493660 SLIT2O94813 1529 aa9.2□□□□□ -0.94
SMARCE1-211ENST00000493660 EVA1CP58658 441 aa9.19□□□□□ -0.94
SMARCE1-211ENST00000493660 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
SMARCE1-211ENST00000493660 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-211ENST00000493660 BBXQ8WY36 941 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-211ENST00000493660 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
SMARCE1-211ENST00000493660 SPG7Q9UQ90 795 aa9.19□□□□□ -0.94
SMARCE1-211ENST00000493660 ZNF530Q6P9A1 599 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms