RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 CCDC116Q8IYX3 515 aa11.12□□□□□ -0.63
SMG7-208ENST00000493609 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
SMG7-208ENST00000493609 LZTS3O60299 673 aaPredicted RBP11.11□□□□□ -0.63
SMG7-208ENST00000493609 SCTRP47872 440 aa11.11□□□□□ -0.63
SMG7-208ENST00000493609 NNTQ13423 1086 aa11.11□□□□□ -0.63
SMG7-208ENST00000493609 PPP1R26Q5T8A7 1209 aaPredicted RBP11.11□□□□□ -0.63
SMG7-208ENST00000493609 WFS1O76024 890 aa11.1□□□□□ -0.63
SMG7-208ENST00000493609 DHX9Q08211 1270 aaKnown RBP11.1□□□□□ -0.63
SMG7-208ENST00000493609 CCDC125Q86Z20 511 aa11.1□□□□□ -0.63
SMG7-208ENST00000493609 ACIN1Q9UKV3 1341 aaKnown RBP11.09□□□□□ -0.63
SMG7-208ENST00000493609 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
SMG7-208ENST00000493609 USP4Q13107 963 aa11.09□□□□□ -0.63
SMG7-208ENST00000493609 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
SMG7-208ENST00000493609 CYLDQ9NQC7 956 aa11.09□□□□□ -0.63
SMG7-208ENST00000493609 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
SMG7-208ENST00000493609 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
SMG7-208ENST00000493609 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
SMG7-208ENST00000493609 RASA1P20936 1047 aa11.07□□□□□ -0.64
SMG7-208ENST00000493609 CRTC2Q53ET0 693 aaPredicted RBP11.07□□□□□ -0.64
SMG7-208ENST00000493609 SENP2Q9HC62 589 aa11.07□□□□□ -0.64
SMG7-208ENST00000493609 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
SMG7-208ENST00000493609 CLDN10P78369 228 aa11.06□□□□□ -0.64
SMG7-208ENST00000493609 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
SMG7-208ENST00000493609 LILRA1O75019 489 aa11.05□□□□□ -0.64
SMG7-208ENST00000493609 ATG7O95352 703 aa11.05□□□□□ -0.64
SMG7-208ENST00000493609 MYCP01106 439 aaPredicted RBP11.05□□□□□ -0.64
SMG7-208ENST00000493609 GTF2IP78347 998 aa11.05□□□□□ -0.64
SMG7-208ENST00000493609 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
SMG7-208ENST00000493609 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
SMG7-208ENST00000493609 RETREG2Q8NC44 543 aa11.05□□□□□ -0.64
SMG7-208ENST00000493609 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
SMG7-208ENST00000493609 EMILIN1Q9Y6C2 1016 aa11.05□□□□□ -0.64
SMG7-208ENST00000493609 ADD1P35611 737 aaKnown RBP11.04□□□□□ -0.64
SMG7-208ENST00000493609 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
SMG7-208ENST00000493609 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
SMG7-208ENST00000493609 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
SMG7-208ENST00000493609 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
SMG7-208ENST00000493609 KIAA1024Q9UPX6 916 aa11.04□□□□□ -0.64
SMG7-208ENST00000493609 PCDHGA11Q9Y5H2 935 aa11.04□□□□□ -0.64
SMG7-208ENST00000493609 USP17L15C9J2P7 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L10C9JJH3 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L13C9JLJ4 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L12C9JPN9 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L11C9JVI0 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L21D6R901 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L18D6R9N7 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L22D6RA61 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L17D6RBQ6 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L19D6RCP7 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L20D6RJB6 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
SMG7-208ENST00000493609 USP17L24Q0WX57 530 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 PTK7Q13308 1070 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
SMG7-208ENST00000493609 OSBPL3Q9H4L5 887 aa11.03□□□□□ -0.64
SMG7-208ENST00000493609 DNAAF2Q9NVR5 837 aaKnown RBP11.03□□□□□ -0.64
SMG7-208ENST00000493609 FAM196BA6NMK8 535 aa11.02□□□□□ -0.65
SMG7-208ENST00000493609 ATP1A2P50993 1020 aa11.02□□□□□ -0.65
SMG7-208ENST00000493609 WDR4P57081 412 aaKnown RBP11.02□□□□□ -0.65
SMG7-208ENST00000493609 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
SMG7-208ENST00000493609 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
SMG7-208ENST00000493609 NOVA2Q9UNW9 492 aaKnown RBP11.02□□□□□ -0.65
SMG7-208ENST00000493609 CARNS1A5YM72 827 aa11.01□□□□□ -0.65
SMG7-208ENST00000493609 TERTO14746 1132 aaKnown RBP11.01□□□□□ -0.65
SMG7-208ENST00000493609 ZIC2O95409 532 aaPredicted RBP11.01□□□□□ -0.65
SMG7-208ENST00000493609 PSME1Q06323 249 aa11.01□□□□□ -0.65
SMG7-208ENST00000493609 CBLBQ13191 982 aa11.01□□□□□ -0.65
SMG7-208ENST00000493609 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
SMG7-208ENST00000493609 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
SMG7-208ENST00000493609 CAPN5O15484 640 aaPredicted RBP11□□□□□ -0.65
SMG7-208ENST00000493609 STAU1O95793 577 aaKnown RBP11□□□□□ -0.65
SMG7-208ENST00000493609 CSB-PGBD3P0DP91 1061 aa11□□□□□ -0.65
SMG7-208ENST00000493609 TRIM46Q7Z4K8 759 aa11□□□□□ -0.65
SMG7-208ENST00000493609 STK32AQ8WU08 396 aa11□□□□□ -0.65
SMG7-208ENST00000493609 BMP1P13497 986 aa10.99□□□□□ -0.65
SMG7-208ENST00000493609 TIMP2P16035 220 aa10.99□□□□□ -0.65
SMG7-208ENST00000493609 ELOAQ14241 798 aaKnown RBP10.99□□□□□ -0.65
SMG7-208ENST00000493609 ANKMY2Q8IV38 441 aa10.99□□□□□ -0.65
SMG7-208ENST00000493609 LARGE2Q8N3Y3 721 aa10.99□□□□□ -0.65
SMG7-208ENST00000493609 DKK1O94907 266 aa10.98□□□□□ -0.65
SMG7-208ENST00000493609 DPYDQ12882 1025 aa10.98□□□□□ -0.65
SMG7-208ENST00000493609 CCDC102BQ68D86 513 aa10.98□□□□□ -0.65
SMG7-208ENST00000493609 TPCN2Q8NHX9 752 aa10.98□□□□□ -0.65
SMG7-208ENST00000493609 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
SMG7-208ENST00000493609 WIPF1O43516 503 aa10.96□□□□□ -0.65
SMG7-208ENST00000493609 TMEM164Q5U3C3 297 aa10.96□□□□□ -0.65
SMG7-208ENST00000493609 SIX5Q8N196 739 aa10.96□□□□□ -0.65
SMG7-208ENST00000493609 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.65
SMG7-208ENST00000493609 SFI1A8K8P3 1242 aa10.95□□□□□ -0.66
SMG7-208ENST00000493609 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
SMG7-208ENST00000493609 AGBL1Q96MI9 1066 aa10.95□□□□□ -0.66
SMG7-208ENST00000493609 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
SMG7-208ENST00000493609 ADH1AP07327 375 aa10.94□□□□□ -0.66
SMG7-208ENST00000493609 Q6ZVU0 165 aa10.94□□□□□ -0.66
SMG7-208ENST00000493609 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
SMG7-208ENST00000493609 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMG7-208ENST00000493609 TMEM229AB2RXF0 380 aa10.93□□□□□ -0.66
SMG7-208ENST00000493609 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
SMG7-208ENST00000493609 SCNN1DP51172 638 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms