RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 STK26Q9P289 416 aa8.38□□□□□ -1.07
VPS13B-205ENST00000493587 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
VPS13B-205ENST00000493587 ST20-MTHFSA0A0A6YYL1 179 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 MFAP1P55081 439 aaKnown RBP8.37□□□□□ -1.07
VPS13B-205ENST00000493587 TNPO1Q92973 898 aaKnown RBP8.37□□□□□ -1.07
VPS13B-205ENST00000493587 NCAPGQ9BPX3 1015 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 DIAPH3Q9NSV4 1193 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 A2ML1A8K2U0 1454 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS13B-205ENST00000493587 GOLGA6L1Q8N7Z2 621 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 DRC1Q96MC2 740 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 CRYBG1Q9Y4K1 1723 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 CCDC172P0C7W6 258 aa8.37□□□□□ -1.07
VPS13B-205ENST00000493587 PLCB2Q00722 1185 aa8.36□□□□□ -1.07
VPS13B-205ENST00000493587 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
VPS13B-205ENST00000493587 TECPR2O15040 1411 aa8.36□□□□□ -1.07
VPS13B-205ENST00000493587 KIF3BO15066 747 aa8.36□□□□□ -1.07
VPS13B-205ENST00000493587 LRRC7Q96NW7 1537 aa8.36□□□□□ -1.07
VPS13B-205ENST00000493587 SLFN14P0C7P3 912 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 RGPD8O14715 1765 aaPredicted RBP8.35□□□□□ -1.07
VPS13B-205ENST00000493587 PHRF1Q9P1Y6 1649 aaKnown RBP8.35□□□□□ -1.07
VPS13B-205ENST00000493587 SATB1Q01826 763 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 SEMA3FQ13275 785 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 TERF2Q15554 542 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 ICE2Q659A1 982 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 CTR9Q6PD62 1173 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 SLC26A8Q96RN1 970 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 DEF6Q9H4E7 631 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 USP19O94966 1318 aa8.35□□□□□ -1.07
VPS13B-205ENST00000493587 SLIT1O75093 1534 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 DHX16O60231 1041 aaKnown RBP8.34□□□□□ -1.07
VPS13B-205ENST00000493587 RGL3Q3MIN7 710 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 KRT222Q8N1A0 295 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 NOLC1Q14978 699 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS13B-205ENST00000493587 C17orf53Q8N3J3 647 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-205ENST00000493587 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.34□□□□□ -1.07
VPS13B-205ENST00000493587 ADAMTSL3P82987 1691 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 RAD51AP2Q09MP3 1159 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 PDE3BQ13370 1112 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 SIRT1Q96EB6 747 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS13B-205ENST00000493587 CHD2O14647 1828 aaKnown RBP8.34□□□□□ -1.07
VPS13B-205ENST00000493587 TUBGCP6Q96RT7 1819 aa8.34□□□□□ -1.07
VPS13B-205ENST00000493587 ADGRF5Q8IZF2 1346 aa8.34□□□□□ -1.08
VPS13B-205ENST00000493587 KDM2BQ8NHM5 1336 aa8.34□□□□□ -1.08
VPS13B-205ENST00000493587 TULP2O00295 520 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 HNRNPH2P55795 449 aaKnown RBP8.33□□□□□ -1.08
VPS13B-205ENST00000493587 RBSNQ9H1K0 784 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 PEAK1Q9H792 1746 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 FAM212AQ96EL1 285 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 TBC1D32Q96NH3 1257 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 MYBBP1AQ9BQG0 1328 aaKnown RBP8.33□□□□□ -1.08
VPS13B-205ENST00000493587 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 MAPK8IP3Q9UPT6 1336 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 GYS2P54840 703 aa8.33□□□□□ -1.08
VPS13B-205ENST00000493587 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
VPS13B-205ENST00000493587 BRPF1P55201 1214 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-205ENST00000493587 MAP2K1Q02750 393 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-205ENST00000493587 RNF217Q8TC41 542 aa8.32□□□□□ -1.08
VPS13B-205ENST00000493587 RIOK3O14730 519 aaKnown RBP8.32□□□□□ -1.08
VPS13B-205ENST00000493587 IRF6O14896 467 aa8.32□□□□□ -1.08
VPS13B-205ENST00000493587 SSR1P43307 286 aaKnown RBP8.32□□□□□ -1.08
VPS13B-205ENST00000493587 SART3Q15020 963 aaKnown RBP8.32□□□□□ -1.08
VPS13B-205ENST00000493587 PUS7Q96PZ0 661 aaKnown RBP8.32□□□□□ -1.08
VPS13B-205ENST00000493587 PSMD1Q99460 953 aa8.32□□□□□ -1.08
VPS13B-205ENST00000493587 C22orf23Q9BZE7 217 aa8.32□□□□□ -1.08
VPS13B-205ENST00000493587 ARID4AP29374 1257 aaPredicted RBP8.31□□□□□ -1.08
VPS13B-205ENST00000493587 FAM69CQ0P6D2 419 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 DNAJC21Q5F1R6 531 aaKnown RBP8.31□□□□□ -1.08
VPS13B-205ENST00000493587 MCTP1Q6DN14 999 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 DIP2AQ14689 1571 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 TRMT2AQ8IZ69 625 aaKnown RBP8.31□□□□□ -1.08
VPS13B-205ENST00000493587 CEP120Q8N960 986 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
VPS13B-205ENST00000493587 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 KANK1Q14678 1352 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 CALRP27797 417 aaKnown RBP8.31□□□□□ -1.08
VPS13B-205ENST00000493587 PRIM1P49642 420 aaKnown RBP8.31□□□□□ -1.08
VPS13B-205ENST00000493587 CALR3Q96L12 384 aaKnown RBP8.31□□□□□ -1.08
VPS13B-205ENST00000493587 CARD11Q9BXL7 1154 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
VPS13B-205ENST00000493587 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
VPS13B-205ENST00000493587 MPHOSPH10O00566 681 aaKnown RBP8.3□□□□□ -1.08
VPS13B-205ENST00000493587 KLHL40Q2TBA0 621 aa8.3□□□□□ -1.08
VPS13B-205ENST00000493587 NOL10Q9BSC4 688 aaKnown RBP8.3□□□□□ -1.08
VPS13B-205ENST00000493587 SH3BP1Q9Y3L3 701 aa8.3□□□□□ -1.08
VPS13B-205ENST00000493587 PPP2R5AQ15172 486 aa8.3□□□□□ -1.08
VPS13B-205ENST00000493587 E2F4Q16254 413 aa8.3□□□□□ -1.08
VPS13B-205ENST00000493587 LRCH2Q5VUJ6 765 aa8.3□□□□□ -1.08
VPS13B-205ENST00000493587 TTC12Q9H892 705 aaPredicted RBP8.3□□□□□ -1.08
VPS13B-205ENST00000493587 CASQ1P31415 396 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 BIRC2Q13490 618 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 ZSCAN23Q3MJ62 389 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 ZNF853P0CG23 659 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 NOM1Q5C9Z4 860 aaKnown RBP8.29□□□□□ -1.08
VPS13B-205ENST00000493587 TEX35Q5T0J7 233 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 PHF23Q9BUL5 403 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms