RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 TNS1Q9HBL0 1735 aaKnown RBP12.85□□□□□ -0.35
SGIP1-213ENST00000493564 MTHFSP49914 203 aa12.84□□□□□ -0.35
SGIP1-213ENST00000493564 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
SGIP1-213ENST00000493564 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.35
SGIP1-213ENST00000493564 ANKRD26Q9UPS8 1709 aa12.83□□□□□ -0.36
SGIP1-213ENST00000493564 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
SGIP1-213ENST00000493564 R3HDM1Q15032 1099 aaKnown RBP12.83□□□□□ -0.36
SGIP1-213ENST00000493564 PROM2Q8N271 834 aa12.83□□□□□ -0.36
SGIP1-213ENST00000493564 PLSCR1O15162 318 aa12.82□□□□□ -0.36
SGIP1-213ENST00000493564 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
SGIP1-213ENST00000493564 BCL9O00512 1426 aa12.81□□□□□ -0.36
SGIP1-213ENST00000493564 CYP27B1O15528 508 aa12.81□□□□□ -0.36
SGIP1-213ENST00000493564 IL13P35225 146 aa12.8□□□□□ -0.36
SGIP1-213ENST00000493564 AEBP1Q8IUX7 1158 aa12.8□□□□□ -0.36
SGIP1-213ENST00000493564 TXNRD1Q16881 649 aa12.79□□□□□ -0.36
SGIP1-213ENST00000493564 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
SGIP1-213ENST00000493564 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
SGIP1-213ENST00000493564 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
SGIP1-213ENST00000493564 KCNQ4P56696 695 aa12.78□□□□□ -0.36
SGIP1-213ENST00000493564 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
SGIP1-213ENST00000493564 PCDH11XQ9BZA7 1347 aa12.78□□□□□ -0.36
SGIP1-213ENST00000493564 PCDH11YQ9BZA8 1340 aa12.78□□□□□ -0.36
SGIP1-213ENST00000493564 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
SGIP1-213ENST00000493564 HMOX1P09601 288 aa12.77□□□□□ -0.37
SGIP1-213ENST00000493564 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.37
SGIP1-213ENST00000493564 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.37
SGIP1-213ENST00000493564 SRCAPQ6ZRS2 3230 aa12.77□□□□□ -0.37
SGIP1-213ENST00000493564 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
SGIP1-213ENST00000493564 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
SGIP1-213ENST00000493564 NCAPD2Q15021 1401 aa12.75□□□□□ -0.37
SGIP1-213ENST00000493564 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
SGIP1-213ENST00000493564 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
SGIP1-213ENST00000493564 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
SGIP1-213ENST00000493564 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
SGIP1-213ENST00000493564 ANO8Q9HCE9 1232 aaPredicted RBP12.75□□□□□ -0.37
SGIP1-213ENST00000493564 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
SGIP1-213ENST00000493564 PHKG2P15735 406 aa12.74□□□□□ -0.37
SGIP1-213ENST00000493564 PPP2R1AP30153 589 aa12.74□□□□□ -0.37
SGIP1-213ENST00000493564 PDGFDQ9GZP0 370 aaPredicted RBP12.74□□□□□ -0.37
SGIP1-213ENST00000493564 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
SGIP1-213ENST00000493564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.37
SGIP1-213ENST00000493564 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
SGIP1-213ENST00000493564 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
SGIP1-213ENST00000493564 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
SGIP1-213ENST00000493564 ZNF530Q6P9A1 599 aaPredicted RBP12.73□□□□□ -0.37
SGIP1-213ENST00000493564 PIGBQ92521 554 aa12.73□□□□□ -0.37
SGIP1-213ENST00000493564 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
SGIP1-213ENST00000493564 BTAF1O14981 1849 aa12.72□□□□□ -0.37
SGIP1-213ENST00000493564 NUP188Q5SRE5 1749 aa12.72□□□□□ -0.37
SGIP1-213ENST00000493564 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.37
SGIP1-213ENST00000493564 RREB1Q92766 1687 aa12.71□□□□□ -0.37
SGIP1-213ENST00000493564 SLC15A2Q16348 729 aa12.71□□□□□ -0.37
SGIP1-213ENST00000493564 AMOTQ4VCS5 1084 aa12.71□□□□□ -0.37
SGIP1-213ENST00000493564 C1orf141Q5JVX7 400 aa12.7□□□□□ -0.38
SGIP1-213ENST00000493564 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
SGIP1-213ENST00000493564 TMOD3Q9NYL9 352 aa12.7□□□□□ -0.38
SGIP1-213ENST00000493564 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
SGIP1-213ENST00000493564 ZNF827Q17R98 1081 aa12.69□□□□□ -0.38
SGIP1-213ENST00000493564 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
SGIP1-213ENST00000493564 ASAP1Q9ULH1 1129 aa12.69□□□□□ -0.38
SGIP1-213ENST00000493564 KDRP35968 1356 aa12.69□□□□□ -0.38
SGIP1-213ENST00000493564 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
SGIP1-213ENST00000493564 ZBTB7AO95365 584 aa12.68□□□□□ -0.38
SGIP1-213ENST00000493564 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
SGIP1-213ENST00000493564 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
SGIP1-213ENST00000493564 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
SGIP1-213ENST00000493564 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
SGIP1-213ENST00000493564 CABP4P57796 275 aa12.67□□□□□ -0.38
SGIP1-213ENST00000493564 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
SGIP1-213ENST00000493564 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
SGIP1-213ENST00000493564 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
SGIP1-213ENST00000493564 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
SGIP1-213ENST00000493564 PALLDQ8WX93 1383 aa12.67□□□□□ -0.38
SGIP1-213ENST00000493564 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
SGIP1-213ENST00000493564 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
SGIP1-213ENST00000493564 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
SGIP1-213ENST00000493564 TOGARAM1Q9Y4F4 1720 aa12.66□□□□□ -0.38
SGIP1-213ENST00000493564 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
SGIP1-213ENST00000493564 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
SGIP1-213ENST00000493564 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
SGIP1-213ENST00000493564 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
SGIP1-213ENST00000493564 TFCP2L1Q9NZI6 479 aa12.66□□□□□ -0.38
SGIP1-213ENST00000493564 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
SGIP1-213ENST00000493564 AKAP4Q5JQC9 854 aa12.65□□□□□ -0.38
SGIP1-213ENST00000493564 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
SGIP1-213ENST00000493564 ITGB4P16144 1822 aa12.65□□□□□ -0.39
SGIP1-213ENST00000493564 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
SGIP1-213ENST00000493564 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
SGIP1-213ENST00000493564 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
SGIP1-213ENST00000493564 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
SGIP1-213ENST00000493564 SPON1Q9HCB6 807 aa12.64□□□□□ -0.39
SGIP1-213ENST00000493564 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
SGIP1-213ENST00000493564 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
SGIP1-213ENST00000493564 MSH5O43196 834 aa12.63□□□□□ -0.39
SGIP1-213ENST00000493564 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
SGIP1-213ENST00000493564 SIK1P57059 783 aa12.63□□□□□ -0.39
SGIP1-213ENST00000493564 RALBP1Q15311 655 aa12.63□□□□□ -0.39
SGIP1-213ENST00000493564 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
SGIP1-213ENST00000493564 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
SGIP1-213ENST00000493564 ITPK1Q13572 414 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms