RNA–Protein interactions for RNA: ENST00000493403.1

ARPC1B-221, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-221ENST00000493403 SYTL4Q96C24 671 aaPredicted RBP23.4■■□□□ 1.34
ARPC1B-221ENST00000493403 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
ARPC1B-221ENST00000493403 COG3Q96JB2 828 aa23.38■■□□□ 1.33
ARPC1B-221ENST00000493403 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
ARPC1B-221ENST00000493403 ZCRB1Q8TBF4 217 aaKnown RBP23.37■■□□□ 1.33
ARPC1B-221ENST00000493403 CCNL1Q9UK58 526 aaPredicted RBP23.36■■□□□ 1.33
ARPC1B-221ENST00000493403 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
ARPC1B-221ENST00000493403 USP47Q96K76 1375 aa23.36■■□□□ 1.33
ARPC1B-221ENST00000493403 DOT1LQ8TEK3 1739 aa23.36■■□□□ 1.33
ARPC1B-221ENST00000493403 GOLGB1Q14789 3259 aaKnown RBP23.35■■□□□ 1.33
ARPC1B-221ENST00000493403 FLAD1Q8NFF5 587 aa23.35■■□□□ 1.33
ARPC1B-221ENST00000493403 TUBGCP6Q96RT7 1819 aa23.34■■□□□ 1.33
ARPC1B-221ENST00000493403 HOXC9P31274 260 aa23.34■■□□□ 1.33
ARPC1B-221ENST00000493403 AMPHP49418 695 aa23.34■■□□□ 1.33
ARPC1B-221ENST00000493403 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
ARPC1B-221ENST00000493403 NSD2O96028 1365 aa23.34■■□□□ 1.33
ARPC1B-221ENST00000493403 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.32
ARPC1B-221ENST00000493403 SMG6Q86US8 1419 aaKnown RBP23.32■■□□□ 1.32
ARPC1B-221ENST00000493403 SHANK3Q9BYB0 1731 aa23.31■■□□□ 1.32
ARPC1B-221ENST00000493403 NLGN2Q8NFZ4 835 aa23.31■■□□□ 1.32
ARPC1B-221ENST00000493403 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
ARPC1B-221ENST00000493403 MSH5O43196 834 aa23.29■■□□□ 1.32
ARPC1B-221ENST00000493403 IFFO2Q5TF58 517 aa23.28■■□□□ 1.32
ARPC1B-221ENST00000493403 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
ARPC1B-221ENST00000493403 MEGF6O75095 1541 aa23.28■■□□□ 1.32
ARPC1B-221ENST00000493403 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
ARPC1B-221ENST00000493403 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.314e-9■■■■□ 22.7
ARPC1B-221ENST00000493403 KCNQ4P56696 695 aa23.26■■□□□ 1.31
ARPC1B-221ENST00000493403 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
ARPC1B-221ENST00000493403 PCDH11XQ9BZA7 1347 aa23.25■■□□□ 1.31
ARPC1B-221ENST00000493403 PCDH11YQ9BZA8 1340 aa23.25■■□□□ 1.31
ARPC1B-221ENST00000493403 KIF24Q5T7B8 1368 aa23.25■■□□□ 1.31
ARPC1B-221ENST00000493403 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
ARPC1B-221ENST00000493403 C5P01031 1676 aa23.23■■□□□ 1.31
ARPC1B-221ENST00000493403 TATP17735 454 aaPredicted RBP23.23■■□□□ 1.31
ARPC1B-221ENST00000493403 SMARCC1Q92922 1105 aaPredicted RBP23.22■■□□□ 1.31
ARPC1B-221ENST00000493403 NBPF6Q5VWK0 638 aa23.21■■□□□ 1.31
ARPC1B-221ENST00000493403 NBPF4Q96M43 638 aa23.21■■□□□ 1.31
ARPC1B-221ENST00000493403 TESK2Q96S53 571 aa23.21■■□□□ 1.31
ARPC1B-221ENST00000493403 GPBP1L1Q9HC44 474 aaPredicted RBP23.21■■□□□ 1.31
ARPC1B-221ENST00000493403 ATP10DQ9P241 1426 aa23.21■■□□□ 1.31
ARPC1B-221ENST00000493403 RGPD2P0DJD1 1756 aa23.21■■□□□ 1.31
ARPC1B-221ENST00000493403 CEP350Q5VT06 3117 aa23.19■■□□□ 1.3
ARPC1B-221ENST00000493403 INSRP06213 1382 aa23.19■■□□□ 1.3
ARPC1B-221ENST00000493403 PALLDQ8WX93 1383 aa23.19■■□□□ 1.3
ARPC1B-221ENST00000493403 TAF1LQ8IZX4 1826 aa23.17■■□□□ 1.3
ARPC1B-221ENST00000493403 ADCY9O60503 1353 aa23.16■■□□□ 1.3
ARPC1B-221ENST00000493403 FLT4P35916 1363 aa23.16■■□□□ 1.3
ARPC1B-221ENST00000493403 ST20-MTHFSA0A0A6YYL1 179 aa23.16■■□□□ 1.3
ARPC1B-221ENST00000493403 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
ARPC1B-221ENST00000493403 AK7Q96M32 723 aa23.16■■□□□ 1.3
ARPC1B-221ENST00000493403 FYB1O15117 783 aa23.15■■□□□ 1.3
ARPC1B-221ENST00000493403 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
ARPC1B-221ENST00000493403 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
ARPC1B-221ENST00000493403 C4BP0C0L5 1744 aa23.13■■□□□ 1.29
ARPC1B-221ENST00000493403 HSPA6P17066 643 aa23.13■■□□□ 1.29
ARPC1B-221ENST00000493403 SSFA2P28290 1259 aa23.13■■□□□ 1.29
ARPC1B-221ENST00000493403 TMF1P82094 1093 aa23.13■■□□□ 1.29
ARPC1B-221ENST00000493403 MPRIPQ6WCQ1 1025 aa23.13■■□□□ 1.29
ARPC1B-221ENST00000493403 FBLN1P23142 703 aa23.12■■□□□ 1.29
ARPC1B-221ENST00000493403 USHBP1Q8N6Y0 703 aa23.11■■□□□ 1.29
ARPC1B-221ENST00000493403 GGNBP2Q9H3C7 697 aa23.1■■□□□ 1.29
ARPC1B-221ENST00000493403 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
ARPC1B-221ENST00000493403 HSP90AB2PQ58FF8 381 aa23.09■■□□□ 1.29
ARPC1B-221ENST00000493403 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
ARPC1B-221ENST00000493403 PKD1L3Q7Z443 1732 aa23.08■■□□□ 1.29
ARPC1B-221ENST00000493403 CYP27B1O15528 508 aa23.08■■□□□ 1.29
ARPC1B-221ENST00000493403 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
ARPC1B-221ENST00000493403 UBR3Q6ZT12 1888 aa23.07■■□□□ 1.28
ARPC1B-221ENST00000493403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.07■■□□□ 1.28
ARPC1B-221ENST00000493403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.07■■□□□ 1.28
ARPC1B-221ENST00000493403 ITGB4P16144 1822 aa23.07■■□□□ 1.28
ARPC1B-221ENST00000493403 KIF20BQ96Q89 1820 aa23.06■■□□□ 1.28
ARPC1B-221ENST00000493403 PLEKHG2Q9H7P9 1386 aa23.06■■□□□ 1.28
ARPC1B-221ENST00000493403 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
ARPC1B-221ENST00000493403 LOC102724428A0A0B4J2F2 783 aa23.04■■□□□ 1.28
ARPC1B-221ENST00000493403 SIK1P57059 783 aa23.04■■□□□ 1.28
ARPC1B-221ENST00000493403 PIGBQ92521 554 aa23.04■■□□□ 1.28
ARPC1B-221ENST00000493403 TOGARAM1Q9Y4F4 1720 aa23.03■■□□□ 1.28
ARPC1B-221ENST00000493403 CICQ96RK0 1608 aaPredicted RBP23.03■■□□□ 1.28
ARPC1B-221ENST00000493403 PHF14O94880 888 aa23.02■■□□□ 1.28
ARPC1B-221ENST00000493403 TMOD3Q9NYL9 352 aa23.02■■□□□ 1.28
ARPC1B-221ENST00000493403 ZNF526Q8TF50 670 aaPredicted RBP23.01■■□□□ 1.27
ARPC1B-221ENST00000493403 MAP2P11137 1827 aaKnown RBP23.01■■□□□ 1.27
ARPC1B-221ENST00000493403 TGFB2P61812 414 aa22.99■■□□□ 1.27
ARPC1B-221ENST00000493403 APLP1P51693 650 aa22.98■■□□□ 1.27
ARPC1B-221ENST00000493403 IFNL2Q8IZJ0 200 aa22.98■■□□□ 1.27
ARPC1B-221ENST00000493403 WASHC2AQ641Q2 1341 aa22.98■■□□□ 1.27
ARPC1B-221ENST00000493403 ANKRD26Q9UPS8 1709 aa22.97■■□□□ 1.27
ARPC1B-221ENST00000493403 GNPATO15228 680 aa22.97■■□□□ 1.27
ARPC1B-221ENST00000493403 NLGN1Q8N2Q7 840 aa22.97■■□□□ 1.27
ARPC1B-221ENST00000493403 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
ARPC1B-221ENST00000493403 KIF3CO14782 793 aa22.96■■□□□ 1.27
ARPC1B-221ENST00000493403 ADRA2BP18089 450 aa22.96■■□□□ 1.27
ARPC1B-221ENST00000493403 ATP6V1AP38606 617 aa22.96■■□□□ 1.27
ARPC1B-221ENST00000493403 AMIGO3Q86WK7 504 aa22.96■■□□□ 1.27
ARPC1B-221ENST00000493403 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
ARPC1B-221ENST00000493403 EMILIN1Q9Y6C2 1016 aa22.95■■□□□ 1.26
ARPC1B-221ENST00000493403 ZNF831Q5JPB2 1677 aa22.94■■□□□ 1.26
ARPC1B-221ENST00000493403 TOMM70O94826 608 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms