RNA–Protein interactions for RNA: ENST00000493051.1

NPHP1-210, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-210ENST00000493051 EYA1Q99502 592 aa12.46□□□□□ -0.41
NPHP1-210ENST00000493051 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
NPHP1-210ENST00000493051 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
NPHP1-210ENST00000493051 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
NPHP1-210ENST00000493051 EZH2Q15910 746 aaKnown RBP12.45□□□□□ -0.42
NPHP1-210ENST00000493051 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
NPHP1-210ENST00000493051 KCNQ2O43526 872 aa12.43□□□□□ -0.42
NPHP1-210ENST00000493051 MTHFSP49914 203 aa12.43□□□□□ -0.42
NPHP1-210ENST00000493051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.42
NPHP1-210ENST00000493051 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
NPHP1-210ENST00000493051 LRRC37A3O60309 1634 aa12.43□□□□□ -0.42
NPHP1-210ENST00000493051 NPM3O75607 178 aaKnown RBP12.42□□□□□ -0.42
NPHP1-210ENST00000493051 NBPF14Q5TI25 921 aa12.42□□□□□ -0.42
NPHP1-210ENST00000493051 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
NPHP1-210ENST00000493051 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
NPHP1-210ENST00000493051 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
NPHP1-210ENST00000493051 PEAK1Q9H792 1746 aa12.41□□□□□ -0.42
NPHP1-210ENST00000493051 IGSF1Q8N6C5 1336 aa12.4□□□□□ -0.42
NPHP1-210ENST00000493051 PCDH11XQ9BZA7 1347 aa12.4□□□□□ -0.42
NPHP1-210ENST00000493051 PCDH11YQ9BZA8 1340 aa12.4□□□□□ -0.42
NPHP1-210ENST00000493051 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
NPHP1-210ENST00000493051 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
NPHP1-210ENST00000493051 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
NPHP1-210ENST00000493051 MEGF6O75095 1541 aa12.4□□□□□ -0.42
NPHP1-210ENST00000493051 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
NPHP1-210ENST00000493051 CYP27B1O15528 508 aa12.39□□□□□ -0.43
NPHP1-210ENST00000493051 IL13P35225 146 aa12.39□□□□□ -0.43
NPHP1-210ENST00000493051 PROM2Q8N271 834 aa12.39□□□□□ -0.43
NPHP1-210ENST00000493051 SYTL4Q96C24 671 aaPredicted RBP12.39□□□□□ -0.43
NPHP1-210ENST00000493051 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
NPHP1-210ENST00000493051 DIAPH1O60610 1272 aaKnown RBP12.38□□□□□ -0.43
NPHP1-210ENST00000493051 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-210ENST00000493051 PLEKHO1Q53GL0 409 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-210ENST00000493051 MAP2P11137 1827 aaKnown RBP12.38□□□□□ -0.43
NPHP1-210ENST00000493051 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
NPHP1-210ENST00000493051 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
NPHP1-210ENST00000493051 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
NPHP1-210ENST00000493051 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
NPHP1-210ENST00000493051 SULT6B1Q6IMI4 303 aa12.37□□□□□ -0.43
NPHP1-210ENST00000493051 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
NPHP1-210ENST00000493051 WNK3Q9BYP7 1800 aa12.37□□□□□ -0.43
NPHP1-210ENST00000493051 PSDA5PKW4 1024 aaPredicted RBP12.36□□□□□ -0.43
NPHP1-210ENST00000493051 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
NPHP1-210ENST00000493051 U3KPZ7 1027 aaPredicted RBP12.36□□□□□ -0.43
NPHP1-210ENST00000493051 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
NPHP1-210ENST00000493051 HSP90AB1P08238 724 aaKnown RBP12.35□□□□□ -0.43
NPHP1-210ENST00000493051 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
NPHP1-210ENST00000493051 PHKG2P15735 406 aa12.34□□□□□ -0.43
NPHP1-210ENST00000493051 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
NPHP1-210ENST00000493051 AEBP1Q8IUX7 1158 aa12.34□□□□□ -0.43
NPHP1-210ENST00000493051 SRCAPQ6ZRS2 3230 aa12.34□□□□□ -0.43
NPHP1-210ENST00000493051 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 KDRP35968 1356 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 CAPN15O75808 1086 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 PPP2R1AP30153 589 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 DSG3P32926 999 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
NPHP1-210ENST00000493051 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 DCAF5Q96JK2 942 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
NPHP1-210ENST00000493051 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
NPHP1-210ENST00000493051 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
NPHP1-210ENST00000493051 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
NPHP1-210ENST00000493051 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
NPHP1-210ENST00000493051 ERVV-2B6SEH9 535 aa12.31□□□□□ -0.44
NPHP1-210ENST00000493051 U2SURPO15042 1029 aaKnown RBP12.31□□□□□ -0.44
NPHP1-210ENST00000493051 HMOX1P09601 288 aa12.31□□□□□ -0.44
NPHP1-210ENST00000493051 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
NPHP1-210ENST00000493051 PIGBQ92521 554 aa12.31□□□□□ -0.44
NPHP1-210ENST00000493051 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
NPHP1-210ENST00000493051 SBF2Q86WG5 1849 aa12.31□□□□□ -0.44
NPHP1-210ENST00000493051 RALBP1Q15311 655 aa12.3□□□□□ -0.44
NPHP1-210ENST00000493051 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
NPHP1-210ENST00000493051 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
NPHP1-210ENST00000493051 NHSQ6T4R5 1651 aa12.29□□□□□ -0.44
NPHP1-210ENST00000493051 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
NPHP1-210ENST00000493051 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
NPHP1-210ENST00000493051 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
NPHP1-210ENST00000493051 CABP4P57796 275 aa12.27□□□□□ -0.45
NPHP1-210ENST00000493051 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
NPHP1-210ENST00000493051 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
NPHP1-210ENST00000493051 FCHSD2O94868 740 aa12.26□□□□□ -0.45
NPHP1-210ENST00000493051 U2AF1L5P0DN76 240 aaPredicted RBP12.26□□□□□ -0.45
NPHP1-210ENST00000493051 KCNQ4P56696 695 aa12.26□□□□□ -0.45
NPHP1-210ENST00000493051 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.45
NPHP1-210ENST00000493051 SPON1Q9HCB6 807 aa12.26□□□□□ -0.45
NPHP1-210ENST00000493051 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
NPHP1-210ENST00000493051 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
NPHP1-210ENST00000493051 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
NPHP1-210ENST00000493051 RREB1Q92766 1687 aa12.26□□□□□ -0.45
NPHP1-210ENST00000493051 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
NPHP1-210ENST00000493051 MTHFSDQ2M296 383 aaKnown RBP12.25□□□□□ -0.45
NPHP1-210ENST00000493051 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
NPHP1-210ENST00000493051 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
NPHP1-210ENST00000493051 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
NPHP1-210ENST00000493051 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
NPHP1-210ENST00000493051 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
NPHP1-210ENST00000493051 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
NPHP1-210ENST00000493051 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
NPHP1-210ENST00000493051 SIK1P57059 783 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms