RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 FNBP4Q8N3X1 1017 aaPredicted RBP7.18□□□□□ -1.26
UBE2D4-211ENST00000491770 TMC2Q8TDI7 906 aa7.18□□□□□ -1.26
UBE2D4-211ENST00000491770 EMILIN3Q9NT22 766 aa7.18□□□□□ -1.26
UBE2D4-211ENST00000491770 ACEP12821 1306 aa7.18□□□□□ -1.26
UBE2D4-211ENST00000491770 PRR36Q9H6K5 1346 aa7.18□□□□□ -1.26
UBE2D4-211ENST00000491770 AKAP12Q02952 1782 aa7.18□□□□□ -1.26
UBE2D4-211ENST00000491770 SEMA3EO15041 775 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 CSB-PGBD3P0DP91 1061 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 BAG6P46379 1132 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 VPS72Q15906 364 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 FAM98CQ17RN3 349 aaKnown RBP7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 HDGFL2Q7Z4V5 671 aaPredicted RBP7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 TMC1Q8TDI8 760 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 L3MBTL2Q969R5 705 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 USP35Q9P2H5 1018 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 BRD4O60885 1362 aaPredicted RBP7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 KIAA0232Q92628 1395 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 BLMP54132 1417 aaPredicted RBP7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 BCL9LQ86UU0 1499 aa7.17□□□□□ -1.26
UBE2D4-211ENST00000491770 MON2Q7Z3U7 1717 aa7.16□□□□□ -1.26
UBE2D4-211ENST00000491770 ZC3H6P61129 1189 aaKnown RBP7.16□□□□□ -1.26
UBE2D4-211ENST00000491770 KRT27Q7Z3Y8 459 aa7.16□□□□□ -1.26
UBE2D4-211ENST00000491770 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
UBE2D4-211ENST00000491770 SIN3AQ96ST3 1273 aa7.16□□□□□ -1.26
UBE2D4-211ENST00000491770 USP6P35125 1406 aa7.16□□□□□ -1.26
UBE2D4-211ENST00000491770 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 G3V3G9 751 aa7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 PDE3BQ13370 1112 aa7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 NBPF1Q3BBV0 1214 aa7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 CCDC125Q86Z20 511 aa7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 PLPP6Q8IY26 295 aa7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 POLR3AO14802 1390 aaPredicted RBP7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 KTN1Q86UP2 1357 aaKnown RBP7.15□□□□□ -1.26
UBE2D4-211ENST00000491770 PIK3C2AO00443 1686 aa7.15□□□□□ -1.27
UBE2D4-211ENST00000491770 WNK3Q9BYP7 1800 aa7.15□□□□□ -1.27
UBE2D4-211ENST00000491770 LTN1O94822 1766 aa7.14□□□□□ -1.27
UBE2D4-211ENST00000491770 SSH2Q76I76 1423 aa7.14□□□□□ -1.27
UBE2D4-211ENST00000491770 TTC21AQ8NDW8 1320 aa7.13□□□□□ -1.27
UBE2D4-211ENST00000491770 NBPF8Q3BBV2 869 aa7.13□□□□□ -1.27
UBE2D4-211ENST00000491770 TOM1L2Q6ZVM7 507 aa7.13□□□□□ -1.27
UBE2D4-211ENST00000491770 KCNH5Q8NCM2 988 aa7.13□□□□□ -1.27
UBE2D4-211ENST00000491770 PCGF6Q9BYE7 350 aa7.13□□□□□ -1.27
UBE2D4-211ENST00000491770 TERF2IPQ9NYB0 399 aa7.13□□□□□ -1.27
UBE2D4-211ENST00000491770 THSD7AQ9UPZ6 1657 aa7.12□□□□□ -1.27
UBE2D4-211ENST00000491770 CPSF1Q10570 1443 aaKnown RBP7.12□□□□□ -1.27
UBE2D4-211ENST00000491770 SMG6Q86US8 1419 aaKnown RBP7.12□□□□□ -1.27
UBE2D4-211ENST00000491770 POLR3GLQ9BT43 218 aa7.12□□□□□ -1.27
UBE2D4-211ENST00000491770 CABP1Q9NZU7 370 aa7.12□□□□□ -1.27
UBE2D4-211ENST00000491770 KIF20BQ96Q89 1820 aa7.12□□□□□ -1.27
UBE2D4-211ENST00000491770 FAM208AQ9UK61 1670 aaKnown RBP7.12□□□□□ -1.27
UBE2D4-211ENST00000491770 SLIT3O75094 1523 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 CRB1P82279 1406 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 SBNO2Q9Y2G9 1366 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 NINLQ9Y2I6 1382 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 SPATA31A5Q5VU36 1347 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 SPATA31A7Q8IWB4 1347 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 TNS1Q9HBL0 1735 aaKnown RBP7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 PARP4Q9UKK3 1724 aaKnown RBP7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 FAM83GA6ND36 823 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 DPYSL4O14531 572 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 POTEJP0CG39 1038 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 CDCA8Q53HL2 280 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 LMO7Q8WWI1 1683 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 LRRC37A3O60309 1634 aa7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 COL5A2P05997 1499 aaPredicted RBP7.11□□□□□ -1.27
UBE2D4-211ENST00000491770 OVOS2A0A0G2JMS6 1433 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 OVOS2A0A0J9YW53 1432 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 OVOS2Q6IE36 1432 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 KAT6BQ8WYB5 2073 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 CPDO75976 1380 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 USP19O94966 1318 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 C11orf95C9JLR9 678 aaPredicted RBP7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 TCP11L2Q8N4U5 519 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 CCER1Q8TC90 406 aaPredicted RBP7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 ABCC6O95255 1503 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 RGPD5Q99666 1765 aa7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 EDC4Q6P2E9 1401 aaKnown RBP7.1□□□□□ -1.27
UBE2D4-211ENST00000491770 USP47Q96K76 1375 aa7.09□□□□□ -1.27
UBE2D4-211ENST00000491770 SPATA31A1Q5TZJ5 1347 aa7.09□□□□□ -1.27
UBE2D4-211ENST00000491770 POTEB2H3BUK9 544 aa7.09□□□□□ -1.27
UBE2D4-211ENST00000491770 GCP02774 474 aa7.09□□□□□ -1.27
UBE2D4-211ENST00000491770 TMF1P82094 1093 aa7.09□□□□□ -1.27
UBE2D4-211ENST00000491770 PDIA6Q15084 440 aa7.09□□□□□ -1.27
UBE2D4-211ENST00000491770 FAM196AQ6ZSG2 479 aa7.09□□□□□ -1.27
UBE2D4-211ENST00000491770 TTC21BQ7Z4L5 1316 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 MLLT3P42568 568 aaPredicted RBP7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 DDB1Q16531 1140 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 NBPF14Q5TI25 921 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 C3orf67Q6ZVT6 689 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 DEFB132Q7Z7B7 95 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 OXER1Q8TDS5 423 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 CDCA7Q9BWT1 371 aaPredicted RBP7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 THRAP3Q9Y2W1 955 aaKnown RBP7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 CAMTA1Q9Y6Y1 1673 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 AATKQ6ZMQ8 1374 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 PARD3Q8TEW0 1356 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms