RNA–Protein interactions for RNA: ENST00000491674.1

FXR1-221, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-221ENST00000491674 EXOC5O00471 708 aa21.19■□□□□ 0.98
FXR1-221ENST00000491674 ZCRB1Q8TBF4 217 aaKnown RBP21.19■□□□□ 0.98
FXR1-221ENST00000491674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.19■□□□□ 0.98
FXR1-221ENST00000491674 SPG7Q9UQ90 795 aa21.19■□□□□ 0.98
FXR1-221ENST00000491674 MAPK8IP3Q9UPT6 1336 aa21.19■□□□□ 0.98
FXR1-221ENST00000491674 PLEKHG2Q9H7P9 1386 aa21.19■□□□□ 0.98
FXR1-221ENST00000491674 RGPD1P0DJD0 1748 aa21.18■□□□□ 0.98
FXR1-221ENST00000491674 DDB1Q16531 1140 aa21.18■□□□□ 0.98
FXR1-221ENST00000491674 DISP2A7MBM2 1401 aa21.18■□□□□ 0.98
FXR1-221ENST00000491674 SEPT12Q8IYM1 358 aa21.17■□□□□ 0.98
FXR1-221ENST00000491674 RUNDC1Q96C34 613 aa21.17■□□□□ 0.98
FXR1-221ENST00000491674 GLI3P10071 1580 aa21.16■□□□□ 0.98
FXR1-221ENST00000491674 MEGF6O75095 1541 aa21.16■□□□□ 0.98
FXR1-221ENST00000491674 OVOS2A0A0G2JMS6 1433 aa21.16■□□□□ 0.98
FXR1-221ENST00000491674 CCDC146Q8IYE0 955 aa21.15■□□□□ 0.98
FXR1-221ENST00000491674 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
FXR1-221ENST00000491674 PLEKHF1Q96S99 279 aa21.15■□□□□ 0.98
FXR1-221ENST00000491674 PDE3BQ13370 1112 aa21.14■□□□□ 0.97
FXR1-221ENST00000491674 RGPD2P0DJD1 1756 aa21.14■□□□□ 0.97
FXR1-221ENST00000491674 ZNF530Q6P9A1 599 aaPredicted RBP21.13■□□□□ 0.97
FXR1-221ENST00000491674 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
FXR1-221ENST00000491674 PCDH11XQ9BZA7 1347 aa21.12■□□□□ 0.97
FXR1-221ENST00000491674 PCDH11YQ9BZA8 1340 aa21.12■□□□□ 0.97
FXR1-221ENST00000491674 C1orf141Q5JVX7 400 aa21.12■□□□□ 0.97
FXR1-221ENST00000491674 DDX54Q8TDD1 881 aaKnown RBP21.12■□□□□ 0.97
FXR1-221ENST00000491674 MTHFSDQ2M296 383 aaKnown RBP21.11■□□□□ 0.97
FXR1-221ENST00000491674 NFE2L2Q16236 605 aa21.1■□□□□ 0.97
FXR1-221ENST00000491674 IFNL2Q8IZJ0 200 aa21.1■□□□□ 0.97
FXR1-221ENST00000491674 TNS2Q63HR2 1409 aa21.1■□□□□ 0.97
FXR1-221ENST00000491674 HSP90AB1P08238 724 aaKnown RBP21.08■□□□□ 0.97
FXR1-221ENST00000491674 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
FXR1-221ENST00000491674 PARP4Q9UKK3 1724 aaKnown RBP21.07■□□□□ 0.96
FXR1-221ENST00000491674 APAF1O14727 1248 aa21.07■□□□□ 0.96
FXR1-221ENST00000491674 CYP27B1O15528 508 aa21.07■□□□□ 0.96
FXR1-221ENST00000491674 PHKG2P15735 406 aa21.07■□□□□ 0.96
FXR1-221ENST00000491674 KRT27Q7Z3Y8 459 aa21.07■□□□□ 0.96
FXR1-221ENST00000491674 THSD7AQ9UPZ6 1657 aa21.06■□□□□ 0.96
FXR1-221ENST00000491674 GNAT3A8MTJ3 354 aa21.06■□□□□ 0.96
FXR1-221ENST00000491674 TMPOP42166 694 aaKnown RBP21.06■□□□□ 0.96
FXR1-221ENST00000491674 RIPK4P57078 832 aa21.05■□□□□ 0.96
FXR1-221ENST00000491674 LMOD3Q0VAK6 560 aa21.05■□□□□ 0.96
FXR1-221ENST00000491674 MARCH10Q8NA82 808 aaPredicted RBP21.05■□□□□ 0.96
FXR1-221ENST00000491674 RTF1Q92541 710 aaKnown RBP21.05■□□□□ 0.96
FXR1-221ENST00000491674 RGS12O14924 1447 aa21.04■□□□□ 0.96
FXR1-221ENST00000491674 HTATSF1O43719 755 aaKnown RBP21.04■□□□□ 0.96
FXR1-221ENST00000491674 NEUROD2Q15784 382 aa21.04■□□□□ 0.96
FXR1-221ENST00000491674 NGEFQ8N5V2 710 aa21.04■□□□□ 0.96
FXR1-221ENST00000491674 MAP3K5Q99683 1374 aa21.03■□□□□ 0.96
FXR1-221ENST00000491674 RRP7AQ9Y3A4 280 aaKnown RBP21.03■□□□□ 0.96
FXR1-221ENST00000491674 NKX1-1Q15270 411 aaPredicted RBP21.02■□□□□ 0.96
FXR1-221ENST00000491674 DCAF5Q96JK2 942 aa21.02■□□□□ 0.96
FXR1-221ENST00000491674 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
FXR1-221ENST00000491674 LRRC37A3O60309 1634 aa21.01■□□□□ 0.95
FXR1-221ENST00000491674 NCBP3Q53F19 620 aaKnown RBP21.01■□□□□ 0.95
FXR1-221ENST00000491674 MPRIPQ6WCQ1 1025 aa21■□□□□ 0.95
FXR1-221ENST00000491674 FAM196AQ6ZSG2 479 aa21■□□□□ 0.95
FXR1-221ENST00000491674 PKD1L3Q7Z443 1732 aa21■□□□□ 0.95
FXR1-221ENST00000491674 RNMTO43148 476 aaKnown RBP20.98■□□□□ 0.95
FXR1-221ENST00000491674 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
FXR1-221ENST00000491674 FAM182BQ5T319 152 aa20.97■□□□□ 0.95
FXR1-221ENST00000491674 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
FXR1-221ENST00000491674 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
FXR1-221ENST00000491674 CCDC27Q2M243 656 aa20.96■□□□□ 0.95
FXR1-221ENST00000491674 CABP4P57796 275 aa20.95■□□□□ 0.94
FXR1-221ENST00000491674 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
FXR1-221ENST00000491674 CALD1Q05682 793 aaKnown RBP20.95■□□□□ 0.94
FXR1-221ENST00000491674 TEFQ10587 303 aa20.95■□□□□ 0.94
FXR1-221ENST00000491674 MCM10Q7L590 875 aa20.95■□□□□ 0.94
FXR1-221ENST00000491674 IL17REQ8NFR9 667 aa20.95■□□□□ 0.94
FXR1-221ENST00000491674 LGR6Q9HBX8 967 aa20.95■□□□□ 0.94
FXR1-221ENST00000491674 TRIM35Q9UPQ4 493 aa20.95■□□□□ 0.94
FXR1-221ENST00000491674 BCL9O00512 1426 aa20.95■□□□□ 0.94
FXR1-221ENST00000491674 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
FXR1-221ENST00000491674 SYTL4Q96C24 671 aaPredicted RBP20.93■□□□□ 0.94
FXR1-221ENST00000491674 ACSBG1Q96GR2 724 aa20.93■□□□□ 0.94
FXR1-221ENST00000491674 PRIM1P49642 420 aaKnown RBP20.92■□□□□ 0.94
FXR1-221ENST00000491674 WWC1Q8IX03 1113 aa20.92■□□□□ 0.94
FXR1-221ENST00000491674 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
FXR1-221ENST00000491674 KDM6AO15550 1401 aaPredicted RBP20.92■□□□□ 0.94
FXR1-221ENST00000491674 CEMIPQ8WUJ3 1361 aa20.91■□□□□ 0.94
FXR1-221ENST00000491674 SLC52A2Q9HAB3 445 aa20.91■□□□□ 0.94
FXR1-221ENST00000491674 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
FXR1-221ENST00000491674 SHANK3Q9BYB0 1731 aa20.9■□□□□ 0.94
FXR1-221ENST00000491674 TAF7Q15545 349 aaPredicted RBP20.89■□□□□ 0.93
FXR1-221ENST00000491674 WDR63Q8IWG1 891 aa20.89■□□□□ 0.93
FXR1-221ENST00000491674 NFATC2IPQ8NCF5 419 aa20.89■□□□□ 0.93
FXR1-221ENST00000491674 BCL11BQ9C0K0 894 aaPredicted RBP20.88■□□□□ 0.93
FXR1-221ENST00000491674 KCNQ2O43526 872 aa20.87■□□□□ 0.93
FXR1-221ENST00000491674 PIGBQ92521 554 aa20.87■□□□□ 0.93
FXR1-221ENST00000491674 BRWD3Q6RI45 1802 aa20.87■□□□□ 0.93
FXR1-221ENST00000491674 TRIM37O94972 964 aa20.86■□□□□ 0.93
FXR1-221ENST00000491674 IL16Q14005 1332 aa20.85■□□□□ 0.93
FXR1-221ENST00000491674 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
FXR1-221ENST00000491674 GNAI1P63096 354 aa20.85■□□□□ 0.93
FXR1-221ENST00000491674 BABAM1Q9NWV8 329 aa20.85■□□□□ 0.93
FXR1-221ENST00000491674 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
FXR1-221ENST00000491674 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
FXR1-221ENST00000491674 IFT57Q9NWB7 429 aa20.84■□□□□ 0.93
FXR1-221ENST00000491674 GOLGA2Q08379 1002 aa20.83■□□□□ 0.93
FXR1-221ENST00000491674 SF3B2Q13435 895 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms