RNA–Protein interactions for RNA: ENST00000491427.5

STX1A-210, Transcript of syntaxin 1A, humanhuman

TSL 2

Gene STX1A, Length 710 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-210ENST00000491427 MAP3K5Q99683 1374 aa21.67■■□□□ 1.06
STX1A-210ENST00000491427 FYB1O15117 783 aa21.67■■□□□ 1.06
STX1A-210ENST00000491427 NBPF6Q5VWK0 638 aa21.67■■□□□ 1.06
STX1A-210ENST00000491427 NBPF4Q96M43 638 aa21.67■■□□□ 1.06
STX1A-210ENST00000491427 GGNBP2Q9H3C7 697 aa21.67■■□□□ 1.06
STX1A-210ENST00000491427 PAPPAQ13219 1627 aa21.66■■□□□ 1.06
STX1A-210ENST00000491427 PNPLA7Q6ZV29 1317 aa21.66■■□□□ 1.06
STX1A-210ENST00000491427 RAPGEF4Q8WZA2 1011 aa21.66■■□□□ 1.06
STX1A-210ENST00000491427 CGNL1Q0VF96 1302 aa21.65■■□□□ 1.06
STX1A-210ENST00000491427 CCNL1Q9UK58 526 aaPredicted RBP21.65■■□□□ 1.06
STX1A-210ENST00000491427 RTL1A6NKG5 1358 aa21.64■■□□□ 1.06
STX1A-210ENST00000491427 TATP17735 454 aaPredicted RBP21.64■■□□□ 1.05
STX1A-210ENST00000491427 CDCA8Q53HL2 280 aa21.64■■□□□ 1.05
STX1A-210ENST00000491427 FAM208AQ9UK61 1670 aaKnown RBP21.63■■□□□ 1.05
STX1A-210ENST00000491427 MSH5O43196 834 aa21.63■■□□□ 1.05
STX1A-210ENST00000491427 USHBP1Q8N6Y0 703 aa21.63■■□□□ 1.05
STX1A-210ENST00000491427 USP47Q96K76 1375 aa21.62■■□□□ 1.05
STX1A-210ENST00000491427 SMG6Q86US8 1419 aaKnown RBP21.62■■□□□ 1.05
STX1A-210ENST00000491427 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
STX1A-210ENST00000491427 PELP1Q8IZL8 1130 aaKnown RBP21.61■■□□□ 1.05
STX1A-210ENST00000491427 NSD2O96028 1365 aa21.61■■□□□ 1.05
STX1A-210ENST00000491427 MEGF6O75095 1541 aa21.6■■□□□ 1.05
STX1A-210ENST00000491427 HSP90AB2PQ58FF8 381 aa21.59■■□□□ 1.05
STX1A-210ENST00000491427 INSRP06213 1382 aa21.58■■□□□ 1.04
STX1A-210ENST00000491427 COL23A1Q86Y22 540 aaPredicted RBP21.56■■□□□ 1.04
STX1A-210ENST00000491427 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
STX1A-210ENST00000491427 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
STX1A-210ENST00000491427 FLT4P35916 1363 aa21.54■■□□□ 1.04
STX1A-210ENST00000491427 KIF24Q5T7B8 1368 aa21.54■■□□□ 1.04
STX1A-210ENST00000491427 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
STX1A-210ENST00000491427 NLGN2Q8NFZ4 835 aa21.54■■□□□ 1.04
STX1A-210ENST00000491427 FLAD1Q8NFF5 587 aa21.53■■□□□ 1.04
STX1A-210ENST00000491427 DOT1LQ8TEK3 1739 aa21.52■■□□□ 1.04
STX1A-210ENST00000491427 C1QTNF8P60827 252 aa21.52■■□□□ 1.04
STX1A-210ENST00000491427 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
STX1A-210ENST00000491427 PPM1GO15355 546 aaPredicted RBP21.51■■□□□ 1.03
STX1A-210ENST00000491427 GRIN3BO60391 1043 aa21.51■■□□□ 1.03
STX1A-210ENST00000491427 TRIM26Q12899 539 aaPredicted RBP21.51■■□□□ 1.03
STX1A-210ENST00000491427 MSL1Q68DK7 614 aa21.51■■□□□ 1.03
STX1A-210ENST00000491427 SMARCC1Q92922 1105 aaPredicted RBP21.51■■□□□ 1.03
STX1A-210ENST00000491427 CARD14Q9BXL6 1004 aa21.51■■□□□ 1.03
STX1A-210ENST00000491427 QSER1Q2KHR3 1735 aa21.51■■□□□ 1.03
STX1A-210ENST00000491427 CYP27B1O15528 508 aa21.5■■□□□ 1.03
STX1A-210ENST00000491427 EMILIN1Q9Y6C2 1016 aa21.5■■□□□ 1.03
STX1A-210ENST00000491427 PALLDQ8WX93 1383 aa21.49■■□□□ 1.03
STX1A-210ENST00000491427 SPG7Q9UQ90 795 aa21.49■■□□□ 1.03
STX1A-210ENST00000491427 LY75O60449 1722 aa21.49■■□□□ 1.03
STX1A-210ENST00000491427 CHD4Q14839 1912 aa21.49■■□□□ 1.03
STX1A-210ENST00000491427 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
STX1A-210ENST00000491427 SHANK3Q9BYB0 1731 aa21.46■■□□□ 1.03
STX1A-210ENST00000491427 AK7Q96M32 723 aa21.46■■□□□ 1.03
STX1A-210ENST00000491427 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
STX1A-210ENST00000491427 GIGYF1O75420 1035 aaPredicted RBP21.45■■□□□ 1.02
STX1A-210ENST00000491427 YBX3P16989 372 aaKnown RBP eCLIP21.45■■□□□ 1.02
STX1A-210ENST00000491427 PIGBQ92521 554 aa21.45■■□□□ 1.02
STX1A-210ENST00000491427 CD2APQ9Y5K6 639 aa21.45■■□□□ 1.02
STX1A-210ENST00000491427 COL24A1Q17RW2 1714 aa21.44■■□□□ 1.02
STX1A-210ENST00000491427 NKX1-1Q15270 411 aaPredicted RBP21.44■■□□□ 1.02
STX1A-210ENST00000491427 TIMELESSQ9UNS1 1208 aa21.44■■□□□ 1.02
STX1A-210ENST00000491427 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
STX1A-210ENST00000491427 TUBGCP6Q96RT7 1819 aa21.42■■□□□ 1.02
STX1A-210ENST00000491427 EYA1Q99502 592 aa21.42■■□□□ 1.02
STX1A-210ENST00000491427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.42■■□□□ 1.02
STX1A-210ENST00000491427 PHF14O94880 888 aa21.4■■□□□ 1.02
STX1A-210ENST00000491427 POLR3GLQ9BT43 218 aa21.4■■□□□ 1.02
STX1A-210ENST00000491427 TMOD3Q9NYL9 352 aa21.4■■□□□ 1.02
STX1A-210ENST00000491427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.39■■□□□ 1.01
STX1A-210ENST00000491427 LOC102724428A0A0B4J2F2 783 aa21.39■■□□□ 1.01
STX1A-210ENST00000491427 SIK1P57059 783 aa21.39■■□□□ 1.01
STX1A-210ENST00000491427 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
STX1A-210ENST00000491427 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
STX1A-210ENST00000491427 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.01
STX1A-210ENST00000491427 SSFA2P28290 1259 aa21.37■■□□□ 1.01
STX1A-210ENST00000491427 UTRNP46939 3433 aa21.36■■□□□ 1.01
STX1A-210ENST00000491427 SMIM5Q71RC9 77 aa21.36■■□□□ 1.01
STX1A-210ENST00000491427 ASAP1Q9ULH1 1129 aa21.36■■□□□ 1.01
STX1A-210ENST00000491427 NCAPD2Q15021 1401 aa21.36■■□□□ 1.01
STX1A-210ENST00000491427 C5P01031 1676 aa21.35■■□□□ 1.01
STX1A-210ENST00000491427 PHKG2P15735 406 aa21.35■■□□□ 1.01
STX1A-210ENST00000491427 ATP6V1AP38606 617 aa21.35■■□□□ 1.01
STX1A-210ENST00000491427 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
STX1A-210ENST00000491427 AMIGO3Q86WK7 504 aa21.35■■□□□ 1.01
STX1A-210ENST00000491427 LINC00116Q8NCU8 138 aa21.35■■□□□ 1.01
STX1A-210ENST00000491427 GNPATO15228 680 aa21.33■■□□□ 1.01
STX1A-210ENST00000491427 EIF4A2Q14240 407 aaKnown RBP21.33■■□□□ 1.01
STX1A-210ENST00000491427 C4BP0C0L5 1744 aa21.32■■□□□ 1
STX1A-210ENST00000491427 ITPK1Q13572 414 aa21.31■■□□□ 1
STX1A-210ENST00000491427 ATG3Q9NT62 314 aa21.31■■□□□ 1
STX1A-210ENST00000491427 IGSF1Q8N6C5 1336 aa21.3■■□□□ 1
STX1A-210ENST00000491427 PKD1L3Q7Z443 1732 aa21.3■■□□□ 1
STX1A-210ENST00000491427 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
STX1A-210ENST00000491427 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
STX1A-210ENST00000491427 GPBP1L1Q9HC44 474 aaPredicted RBP21.29■■□□□ 1
STX1A-210ENST00000491427 ITGB4P16144 1822 aa21.29■■□□□ 1
STX1A-210ENST00000491427 TAF1LQ8IZX4 1826 aa21.29■■□□□ 1
STX1A-210ENST00000491427 TOGARAM1Q9Y4F4 1720 aa21.29■■□□□ 1
STX1A-210ENST00000491427 ATP10DQ9P241 1426 aa21.29■■□□□ 1
STX1A-210ENST00000491427 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
STX1A-210ENST00000491427 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
STX1A-210ENST00000491427 PLEKHO1Q53GL0 409 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms