RNA–Protein interactions for RNA: ENST00000491215.1

NOTCH4-205, Transcript of notch 4, humanhuman

TSL 3

Gene NOTCH4, Length 1,632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-205ENST00000491215 FCHSD2O94868 740 aa28.92■■■□□ 2.22
NOTCH4-205ENST00000491215 RSPH6AQ9H0K4 717 aa28.92■■■□□ 2.22
NOTCH4-205ENST00000491215 LRRC37A3O60309 1634 aa28.92■■■□□ 2.22
NOTCH4-205ENST00000491215 PRKAR2BP31323 418 aa28.91■■■□□ 2.22
NOTCH4-205ENST00000491215 DDB1Q16531 1140 aa28.91■■■□□ 2.22
NOTCH4-205ENST00000491215 PNISRQ8TF01 805 aaKnown RBP28.91■■■□□ 2.22
NOTCH4-205ENST00000491215 ADAMTS8Q9UP79 889 aa28.91■■■□□ 2.22
NOTCH4-205ENST00000491215 RGS12O14924 1447 aa28.91■■■□□ 2.22
NOTCH4-205ENST00000491215 EXOC5O00471 708 aa28.89■■■□□ 2.22
NOTCH4-205ENST00000491215 TNS2Q63HR2 1409 aa28.87■■■□□ 2.21
NOTCH4-205ENST00000491215 FAM9BQ8IZU0 186 aa28.87■■■□□ 2.21
NOTCH4-205ENST00000491215 ZCRB1Q8TBF4 217 aaKnown RBP28.87■■■□□ 2.21
NOTCH4-205ENST00000491215 PNNQ9H307 717 aaKnown RBP28.87■■■□□ 2.21
NOTCH4-205ENST00000491215 NEFMP07197 916 aa28.87■■■□□ 2.21
NOTCH4-205ENST00000491215 PKD1L3Q7Z443 1732 aa28.86■■■□□ 2.21
NOTCH4-205ENST00000491215 SPG7Q9UQ90 795 aa28.86■■■□□ 2.21
NOTCH4-205ENST00000491215 PLEKHG2Q9H7P9 1386 aa28.85■■■□□ 2.21
NOTCH4-205ENST00000491215 PDE3BQ13370 1112 aa28.85■■■□□ 2.21
NOTCH4-205ENST00000491215 PLEKHO1Q53GL0 409 aaPredicted RBP28.85■■■□□ 2.21
NOTCH4-205ENST00000491215 BRWD3Q6RI45 1802 aa28.85■■■□□ 2.21
NOTCH4-205ENST00000491215 AMOTQ4VCS5 1084 aa28.84■■■□□ 2.21
NOTCH4-205ENST00000491215 CCDC146Q8IYE0 955 aa28.83■■■□□ 2.21
NOTCH4-205ENST00000491215 DDX54Q8TDD1 881 aaKnown RBP28.83■■■□□ 2.21
NOTCH4-205ENST00000491215 MAPK8IP3Q9UPT6 1336 aa28.83■■■□□ 2.21
NOTCH4-205ENST00000491215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.83■■■□□ 2.21
NOTCH4-205ENST00000491215 SHANK3Q9BYB0 1731 aa28.82■■■□□ 2.2
NOTCH4-205ENST00000491215 PHACTR3Q96KR7 559 aa28.82■■■□□ 2.2
NOTCH4-205ENST00000491215 PCDH11XQ9BZA7 1347 aa28.82■■■□□ 2.2
NOTCH4-205ENST00000491215 PCDH11YQ9BZA8 1340 aa28.82■■■□□ 2.2
NOTCH4-205ENST00000491215 PLEKHF1Q96S99 279 aa28.81■■■□□ 2.2
NOTCH4-205ENST00000491215 ZNF530Q6P9A1 599 aaPredicted RBP28.8■■■□□ 2.2
NOTCH4-205ENST00000491215 KRT27Q7Z3Y8 459 aa28.8■■■□□ 2.2
NOTCH4-205ENST00000491215 MTHFSDQ2M296 383 aaKnown RBP28.79■■■□□ 2.2
NOTCH4-205ENST00000491215 RUNDC1Q96C34 613 aa28.78■■■□□ 2.2
NOTCH4-205ENST00000491215 C1orf141Q5JVX7 400 aa28.76■■■□□ 2.2
NOTCH4-205ENST00000491215 MARCH10Q8NA82 808 aaPredicted RBP28.76■■■□□ 2.2
NOTCH4-205ENST00000491215 GAS2L2Q8NHY3 880 aa28.76■■■□□ 2.2
NOTCH4-205ENST00000491215 CYP27B1O15528 508 aa28.76■■■□□ 2.19
NOTCH4-205ENST00000491215 FAM182BQ5T319 152 aa28.75■■■□□ 2.19
NOTCH4-205ENST00000491215 IFNL2Q8IZJ0 200 aa28.75■■■□□ 2.19
NOTCH4-205ENST00000491215 PHKG2P15735 406 aa28.74■■■□□ 2.19
NOTCH4-205ENST00000491215 AKAP4Q5JQC9 854 aa28.71■■■□□ 2.19
NOTCH4-205ENST00000491215 EP400Q96L91 3159 aa28.69■■■□□ 2.18
NOTCH4-205ENST00000491215 NFE2L2Q16236 605 aa28.69■■■□□ 2.18
NOTCH4-205ENST00000491215 MAP3K5Q99683 1374 aa28.68■■■□□ 2.18
NOTCH4-205ENST00000491215 APAF1O14727 1248 aa28.68■■■□□ 2.18
NOTCH4-205ENST00000491215 NEUROD2Q15784 382 aa28.68■■■□□ 2.18
NOTCH4-205ENST00000491215 RRP7AQ9Y3A4 280 aaKnown RBP28.68■■■□□ 2.18
NOTCH4-205ENST00000491215 DLG5Q8TDM6 1919 aa28.67■■■□□ 2.18
NOTCH4-205ENST00000491215 GNAT3A8MTJ3 354 aa28.67■■■□□ 2.18
NOTCH4-205ENST00000491215 HSP90AB1P08238 724 aaKnown RBP28.67■■■□□ 2.18
NOTCH4-205ENST00000491215 TMPOP42166 694 aaKnown RBP28.66■■■□□ 2.18
NOTCH4-205ENST00000491215 SENP3-EIF4A1A0A087X0R7 540 aa28.65■■■□□ 2.18
NOTCH4-205ENST00000491215 MPRIPQ6WCQ1 1025 aa28.65■■■□□ 2.18
NOTCH4-205ENST00000491215 FAM196AQ6ZSG2 479 aa28.65■■■□□ 2.18
NOTCH4-205ENST00000491215 RIPK4P57078 832 aa28.65■■■□□ 2.18
NOTCH4-205ENST00000491215 NKX1-1Q15270 411 aaPredicted RBP28.65■■■□□ 2.18
NOTCH4-205ENST00000491215 RTF1Q92541 710 aaKnown RBP28.64■■■□□ 2.18
NOTCH4-205ENST00000491215 DCAF5Q96JK2 942 aa28.64■■■□□ 2.18
NOTCH4-205ENST00000491215 KAT6BQ8WYB5 2073 aa28.64■■■□□ 2.17
NOTCH4-205ENST00000491215 DOT1LQ8TEK3 1739 aa28.64■■■□□ 2.17
NOTCH4-205ENST00000491215 KDM6AO15550 1401 aaPredicted RBP28.62■■■□□ 2.17
NOTCH4-205ENST00000491215 ACSBG1Q96GR2 724 aa28.61■■■□□ 2.17
NOTCH4-205ENST00000491215 VIRMAQ69YN4 1812 aaKnown RBP28.61■■■□□ 2.17
NOTCH4-205ENST00000491215 TOGARAM1Q9Y4F4 1720 aa28.61■■■□□ 2.17
NOTCH4-205ENST00000491215 BCL9O00512 1426 aa28.61■■■□□ 2.17
NOTCH4-205ENST00000491215 SCN11AQ9UI33 1791 aa28.6■■■□□ 2.17
NOTCH4-205ENST00000491215 ILDR2Q71H61 639 aa28.6■■■□□ 2.17
NOTCH4-205ENST00000491215 SYTL4Q96C24 671 aaPredicted RBP28.6■■■□□ 2.17
NOTCH4-205ENST00000491215 LMOD3Q0VAK6 560 aa28.59■■■□□ 2.17
NOTCH4-205ENST00000491215 SBF2Q86WG5 1849 aa28.59■■■□□ 2.17
NOTCH4-205ENST00000491215 MCM10Q7L590 875 aa28.58■■■□□ 2.17
NOTCH4-205ENST00000491215 LGR6Q9HBX8 967 aa28.58■■■□□ 2.17
NOTCH4-205ENST00000491215 RNMTO43148 476 aaKnown RBP28.58■■■□□ 2.17
NOTCH4-205ENST00000491215 HTATSF1O43719 755 aaKnown RBP28.58■■■□□ 2.17
NOTCH4-205ENST00000491215 DCTN1Q14203 1278 aa28.57■■■□□ 2.16
NOTCH4-205ENST00000491215 SALL2Q9Y467 1007 aaPredicted RBP28.57■■■□□ 2.16
NOTCH4-205ENST00000491215 ADAMTS7Q9UKP4 1686 aa28.56■■■□□ 2.16
NOTCH4-205ENST00000491215 PRIM1P49642 420 aaKnown RBP28.56■■■□□ 2.16
NOTCH4-205ENST00000491215 IL17REQ8NFR9 667 aa28.56■■■□□ 2.16
NOTCH4-205ENST00000491215 NHSQ6T4R5 1651 aa28.55■■■□□ 2.16
NOTCH4-205ENST00000491215 ERVV-2B6SEH9 535 aa28.54■■■□□ 2.16
NOTCH4-205ENST00000491215 TRIM37O94972 964 aa28.54■■■□□ 2.16
NOTCH4-205ENST00000491215 ITGB4P16144 1822 aa28.54■■■□□ 2.16
NOTCH4-205ENST00000491215 KCNQ2O43526 872 aa28.54■■■□□ 2.16
NOTCH4-205ENST00000491215 CABP4P57796 275 aa28.54■■■□□ 2.16
NOTCH4-205ENST00000491215 TRIM35Q9UPQ4 493 aa28.54■■■□□ 2.16
NOTCH4-205ENST00000491215 TEFQ10587 303 aa28.53■■■□□ 2.16
NOTCH4-205ENST00000491215 TMOD3Q9NYL9 352 aa28.53■■■□□ 2.16
NOTCH4-205ENST00000491215 CEMIPQ8WUJ3 1361 aa28.53■■■□□ 2.16
NOTCH4-205ENST00000491215 THUMPD2Q9BTF0 503 aaKnown RBP28.52■■■□□ 2.16
NOTCH4-205ENST00000491215 NFATC2IPQ8NCF5 419 aa28.51■■■□□ 2.15
NOTCH4-205ENST00000491215 SLC52A2Q9HAB3 445 aa28.51■■■□□ 2.15
NOTCH4-205ENST00000491215 MRC1P22897 1456 aa28.5■■■□□ 2.15
NOTCH4-205ENST00000491215 BCL11BQ9C0K0 894 aaPredicted RBP28.5■■■□□ 2.15
NOTCH4-205ENST00000491215 PTF1AQ7RTS3 328 aa28.49■■■□□ 2.15
NOTCH4-205ENST00000491215 CCDC27Q2M243 656 aa28.47■■■□□ 2.15
NOTCH4-205ENST00000491215 NGEFQ8N5V2 710 aa28.47■■■□□ 2.15
NOTCH4-205ENST00000491215 PIGBQ92521 554 aa28.47■■■□□ 2.15
NOTCH4-205ENST00000491215 HNRNPUQ00839 825 aaKnown RBP eCLIP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms