RNA–Protein interactions for RNA: ENST00000491162.1

CLCN2-209, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-209ENST00000491162 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
CLCN2-209ENST00000491162 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
CLCN2-209ENST00000491162 FHDC1Q9C0D6 1143 aaPredicted RBP16.01■□□□□ 0.15
CLCN2-209ENST00000491162 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
CLCN2-209ENST00000491162 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
CLCN2-209ENST00000491162 ITGB4P16144 1822 aa16■□□□□ 0.15
CLCN2-209ENST00000491162 MAP2P11137 1827 aaKnown RBP15.99■□□□□ 0.15
CLCN2-209ENST00000491162 TMF1P82094 1093 aa15.99■□□□□ 0.15
CLCN2-209ENST00000491162 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
CLCN2-209ENST00000491162 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
CLCN2-209ENST00000491162 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
CLCN2-209ENST00000491162 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
CLCN2-209ENST00000491162 RTL1A6NKG5 1358 aa15.99■□□□□ 0.15
CLCN2-209ENST00000491162 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
CLCN2-209ENST00000491162 HSP90AB2PQ58FF8 381 aa15.98■□□□□ 0.15
CLCN2-209ENST00000491162 NSD3Q9BZ95 1437 aa15.97■□□□□ 0.15
CLCN2-209ENST00000491162 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
CLCN2-209ENST00000491162 SYT17Q9BSW7 474 aa15.97■□□□□ 0.15
CLCN2-209ENST00000491162 C5P01031 1676 aa15.97■□□□□ 0.15
CLCN2-209ENST00000491162 CHD4Q14839 1912 aa15.97■□□□□ 0.15
CLCN2-209ENST00000491162 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
CLCN2-209ENST00000491162 PNPLA7Q6ZV29 1317 aa15.96■□□□□ 0.15
CLCN2-209ENST00000491162 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
CLCN2-209ENST00000491162 UTRNP46939 3433 aa15.93■□□□□ 0.14
CLCN2-209ENST00000491162 INSRP06213 1382 aa15.93■□□□□ 0.14
CLCN2-209ENST00000491162 ARXQ96QS3 562 aa15.93■□□□□ 0.14
CLCN2-209ENST00000491162 FLT4P35916 1363 aa15.92■□□□□ 0.14
CLCN2-209ENST00000491162 SMG6Q86US8 1419 aaKnown RBP15.92■□□□□ 0.14
CLCN2-209ENST00000491162 SLC27A3Q5K4L6 730 aa15.91■□□□□ 0.14
CLCN2-209ENST00000491162 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
CLCN2-209ENST00000491162 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
CLCN2-209ENST00000491162 CYP27B1O15528 508 aa15.9■□□□□ 0.14
CLCN2-209ENST00000491162 RAPGEF4Q8WZA2 1011 aa15.9■□□□□ 0.14
CLCN2-209ENST00000491162 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
CLCN2-209ENST00000491162 TFCP2L1Q9NZI6 479 aa15.9■□□□□ 0.14
CLCN2-209ENST00000491162 CCNL1Q9UK58 526 aaPredicted RBP15.9■□□□□ 0.14
CLCN2-209ENST00000491162 PPM1GO15355 546 aaPredicted RBP15.89■□□□□ 0.13
CLCN2-209ENST00000491162 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
CLCN2-209ENST00000491162 TATP17735 454 aaPredicted RBP15.89■□□□□ 0.13
CLCN2-209ENST00000491162 POLR3GLQ9BT43 218 aa15.89■□□□□ 0.13
CLCN2-209ENST00000491162 SMIM5Q71RC9 77 aa15.88■□□□□ 0.13
CLCN2-209ENST00000491162 NLGN2Q8NFZ4 835 aa15.88■□□□□ 0.13
CLCN2-209ENST00000491162 UBR3Q6ZT12 1888 aa15.88■□□□□ 0.13
CLCN2-209ENST00000491162 C4BP0C0L5 1744 aa15.88■□□□□ 0.13
CLCN2-209ENST00000491162 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
CLCN2-209ENST00000491162 MSL1Q68DK7 614 aa15.87■□□□□ 0.13
CLCN2-209ENST00000491162 AMIGO3Q86WK7 504 aa15.87■□□□□ 0.13
CLCN2-209ENST00000491162 COL23A1Q86Y22 540 aaPredicted RBP15.87■□□□□ 0.13
CLCN2-209ENST00000491162 MAP3K5Q99683 1374 aa15.87■□□□□ 0.13
CLCN2-209ENST00000491162 CDCA8Q53HL2 280 aa15.86■□□□□ 0.13
CLCN2-209ENST00000491162 MPRIPQ6WCQ1 1025 aa15.86■□□□□ 0.13
CLCN2-209ENST00000491162 PCDH11XQ9BZA7 1347 aa15.86■□□□□ 0.13
CLCN2-209ENST00000491162 PCDH11YQ9BZA8 1340 aa15.86■□□□□ 0.13
CLCN2-209ENST00000491162 PALLDQ8WX93 1383 aa15.86■□□□□ 0.13
CLCN2-209ENST00000491162 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
CLCN2-209ENST00000491162 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
CLCN2-209ENST00000491162 CGNL1Q0VF96 1302 aa15.85■□□□□ 0.13
CLCN2-209ENST00000491162 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
CLCN2-209ENST00000491162 MSH5O43196 834 aa15.84■□□□□ 0.13
CLCN2-209ENST00000491162 PELP1Q8IZL8 1130 aaKnown RBP15.83■□□□□ 0.12
CLCN2-209ENST00000491162 SLC16A10Q8TF71 515 aa15.83■□□□□ 0.12
CLCN2-209ENST00000491162 EYA1Q99502 592 aa15.83■□□□□ 0.12
CLCN2-209ENST00000491162 POLKQ9UBT6 870 aa15.83■□□□□ 0.12
CLCN2-209ENST00000491162 PIGBQ92521 554 aa15.82■□□□□ 0.12
CLCN2-209ENST00000491162 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
CLCN2-209ENST00000491162 HSPA5P11021 654 aaKnown RBP15.81■□□□□ 0.12
CLCN2-209ENST00000491162 POLD1P28340 1107 aa15.81■□□□□ 0.12
CLCN2-209ENST00000491162 GPR162Q16538 588 aa15.81■□□□□ 0.12
CLCN2-209ENST00000491162 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
CLCN2-209ENST00000491162 CLSPNQ9HAW4 1339 aa15.79■□□□□ 0.12
CLCN2-209ENST00000491162 YBX3P16989 372 aaKnown RBP eCLIP15.79■□□□□ 0.12
CLCN2-209ENST00000491162 EIF4A2Q14240 407 aaKnown RBP15.79■□□□□ 0.12
CLCN2-209ENST00000491162 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
CLCN2-209ENST00000491162 PHF14O94880 888 aa15.78■□□□□ 0.12
CLCN2-209ENST00000491162 NKX1-1Q15270 411 aaPredicted RBP15.77■□□□□ 0.12
CLCN2-209ENST00000491162 LINC00116Q8NCU8 138 aa15.77■□□□□ 0.12
CLCN2-209ENST00000491162 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.12
CLCN2-209ENST00000491162 PHKG2P15735 406 aa15.76■□□□□ 0.11
CLCN2-209ENST00000491162 ITPK1Q13572 414 aa15.76■□□□□ 0.11
CLCN2-209ENST00000491162 PANK3Q9H999 370 aa15.76■□□□□ 0.11
CLCN2-209ENST00000491162 WWC3Q9ULE0 1092 aa15.76■□□□□ 0.11
CLCN2-209ENST00000491162 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
CLCN2-209ENST00000491162 VIRMAQ69YN4 1812 aaKnown RBP15.75■□□□□ 0.11
CLCN2-209ENST00000491162 SPG7Q9UQ90 795 aa15.75■□□□□ 0.11
CLCN2-209ENST00000491162 AK7Q96M32 723 aa15.74■□□□□ 0.11
CLCN2-209ENST00000491162 MYH14Q7Z406 1995 aaKnown RBP15.73■□□□□ 0.11
CLCN2-209ENST00000491162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
CLCN2-209ENST00000491162 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
CLCN2-209ENST00000491162 SIK1P57059 783 aa15.73■□□□□ 0.11
CLCN2-209ENST00000491162 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLCN2-209ENST00000491162 SMARCC1Q92922 1105 aaPredicted RBP15.73■□□□□ 0.11
CLCN2-209ENST00000491162 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
CLCN2-209ENST00000491162 KDM6AO15550 1401 aaPredicted RBP15.73■□□□□ 0.11
CLCN2-209ENST00000491162 C4AP0C0L4 1744 aa15.73■□□□□ 0.11
CLCN2-209ENST00000491162 KIAA1551Q9HCM1 1747 aa15.73■□□□□ 0.11
CLCN2-209ENST00000491162 N4BP2Q86UW6 1770 aaPredicted RBP15.72■□□□□ 0.11
CLCN2-209ENST00000491162 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
CLCN2-209ENST00000491162 AEBP1Q8IUX7 1158 aa15.72■□□□□ 0.11
CLCN2-209ENST00000491162 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
CLCN2-209ENST00000491162 ATG3Q9NT62 314 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms