RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ADAMTS8Q9UP79 889 aa14.48□□□□□ -0.09
VARS2-210ENST00000490699 THRAP3Q9Y2W1 955 aaKnown RBP14.48□□□□□ -0.09
VARS2-210ENST00000490699 PRKAR2BP31323 418 aa14.47□□□□□ -0.09
VARS2-210ENST00000490699 TCP11L2Q8N4U5 519 aa14.47□□□□□ -0.09
VARS2-210ENST00000490699 USHBP1Q8N6Y0 703 aa14.47□□□□□ -0.09
VARS2-210ENST00000490699 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
VARS2-210ENST00000490699 RGPD2P0DJD1 1756 aa14.47□□□□□ -0.09
VARS2-210ENST00000490699 PLEKHG2Q9H7P9 1386 aa14.47□□□□□ -0.09
VARS2-210ENST00000490699 PARP4Q9UKK3 1724 aaKnown RBP14.46□□□□□ -0.1
VARS2-210ENST00000490699 KDRP35968 1356 aa14.46□□□□□ -0.1
VARS2-210ENST00000490699 BCL9LQ86UU0 1499 aa14.45□□□□□ -0.1
VARS2-210ENST00000490699 A0A0G2JS52 829 aa14.45□□□□□ -0.1
VARS2-210ENST00000490699 IL2RBP14784 551 aa14.45□□□□□ -0.1
VARS2-210ENST00000490699 MYT1Q01538 1121 aa14.45□□□□□ -0.1
VARS2-210ENST00000490699 RSPH6AQ9H0K4 717 aa14.45□□□□□ -0.1
VARS2-210ENST00000490699 SPATA31A1Q5TZJ5 1347 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 SPATA31A5Q5VU36 1347 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 SPATA31A7Q8IWB4 1347 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 AMOTQ4VCS5 1084 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 PLEKHO1Q53GL0 409 aaPredicted RBP14.44□□□□□ -0.1
VARS2-210ENST00000490699 AEBP1Q8IUX7 1158 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 GAS2L2Q8NHY3 880 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 SPG7Q9UQ90 795 aa14.44□□□□□ -0.1
VARS2-210ENST00000490699 NCAPD2Q15021 1401 aa14.43□□□□□ -0.1
VARS2-210ENST00000490699 CCDC146Q8IYE0 955 aa14.43□□□□□ -0.1
VARS2-210ENST00000490699 NGEFQ8N5V2 710 aa14.43□□□□□ -0.1
VARS2-210ENST00000490699 QTRT2Q9H974 415 aaKnown RBP14.43□□□□□ -0.1
VARS2-210ENST00000490699 LMOD3Q0VAK6 560 aa14.42□□□□□ -0.1
VARS2-210ENST00000490699 C1orf141Q5JVX7 400 aa14.42□□□□□ -0.1
VARS2-210ENST00000490699 ATRNO75882 1429 aa14.41□□□□□ -0.1
VARS2-210ENST00000490699 BARGINQ6ZT62 677 aa14.41□□□□□ -0.1
VARS2-210ENST00000490699 GJD4Q96KN9 370 aaPredicted RBP14.41□□□□□ -0.1
VARS2-210ENST00000490699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.41□□□□□ -0.19e-9■□□□□ 10.6
VARS2-210ENST00000490699 WNK3Q9BYP7 1800 aa14.41□□□□□ -0.1
VARS2-210ENST00000490699 RTF1Q92541 710 aaKnown RBP14.4□□□□□ -0.1
VARS2-210ENST00000490699 OVOS2A0A0G2JMS6 1433 aa14.4□□□□□ -0.1
VARS2-210ENST00000490699 PCDH11XQ9BZA7 1347 aa14.4□□□□□ -0.1
VARS2-210ENST00000490699 PCDH11YQ9BZA8 1340 aa14.4□□□□□ -0.1
VARS2-210ENST00000490699 EXOC5O00471 708 aa14.39□□□□□ -0.11
VARS2-210ENST00000490699 HNRNPUQ00839 825 aaKnown RBP eCLIP14.39□□□□□ -0.11
VARS2-210ENST00000490699 ZCRB1Q8TBF4 217 aaKnown RBP14.39□□□□□ -0.11
VARS2-210ENST00000490699 MEGF6O75095 1541 aa14.38□□□□□ -0.11
VARS2-210ENST00000490699 APAF1O14727 1248 aa14.38□□□□□ -0.11
VARS2-210ENST00000490699 HSP90AB1P08238 724 aaKnown RBP14.38□□□□□ -0.11
VARS2-210ENST00000490699 RBM6P78332 1123 aaKnown RBP14.38□□□□□ -0.11
VARS2-210ENST00000490699 NFE2L2Q16236 605 aa14.38□□□□□ -0.11
VARS2-210ENST00000490699 DDB1Q16531 1140 aa14.38□□□□□ -0.11
VARS2-210ENST00000490699 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
VARS2-210ENST00000490699 ZNF530Q6P9A1 599 aaPredicted RBP14.38□□□□□ -0.11
VARS2-210ENST00000490699 PLEKHF1Q96S99 279 aa14.38□□□□□ -0.11
VARS2-210ENST00000490699 CALD1Q05682 793 aaKnown RBP14.37□□□□□ -0.11
VARS2-210ENST00000490699 NEUROD2Q15784 382 aa14.37□□□□□ -0.11
VARS2-210ENST00000490699 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
VARS2-210ENST00000490699 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
VARS2-210ENST00000490699 DISP2A7MBM2 1401 aa14.36□□□□□ -0.11
VARS2-210ENST00000490699 TNS2Q63HR2 1409 aa14.36□□□□□ -0.11
VARS2-210ENST00000490699 RXRBP28702 533 aa14.36□□□□□ -0.11
VARS2-210ENST00000490699 TMPOP42166 694 aaKnown RBP14.36□□□□□ -0.11
VARS2-210ENST00000490699 RIPK4P57078 832 aa14.36□□□□□ -0.11
VARS2-210ENST00000490699 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
VARS2-210ENST00000490699 IFNL2Q8IZJ0 200 aa14.36□□□□□ -0.11
VARS2-210ENST00000490699 MAP3K5Q99683 1374 aa14.35□□□□□ -0.11
VARS2-210ENST00000490699 GLI3P10071 1580 aa14.35□□□□□ -0.11
VARS2-210ENST00000490699 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
VARS2-210ENST00000490699 MTHFSDQ2M296 383 aaKnown RBP14.35□□□□□ -0.11
VARS2-210ENST00000490699 AKAP4Q5JQC9 854 aa14.35□□□□□ -0.11
VARS2-210ENST00000490699 PHACTR3Q96KR7 559 aa14.35□□□□□ -0.11
VARS2-210ENST00000490699 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
VARS2-210ENST00000490699 DDX54Q8TDD1 881 aaKnown RBP14.34□□□□□ -0.11
VARS2-210ENST00000490699 RRP7AQ9Y3A4 280 aaKnown RBP14.34□□□□□ -0.11
VARS2-210ENST00000490699 SALL2Q9Y467 1007 aaPredicted RBP14.33□□□□□ -0.12
VARS2-210ENST00000490699 LRRC37A3O60309 1634 aa14.33□□□□□ -0.12
VARS2-210ENST00000490699 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
VARS2-210ENST00000490699 THSD7AQ9UPZ6 1657 aa14.32□□□□□ -0.12
VARS2-210ENST00000490699 PHKG2P15735 406 aa14.31□□□□□ -0.12
VARS2-210ENST00000490699 SEPT12Q8IYM1 358 aa14.31□□□□□ -0.12
VARS2-210ENST00000490699 DCAF5Q96JK2 942 aa14.31□□□□□ -0.12
VARS2-210ENST00000490699 DLG5Q8TDM6 1919 aa14.31□□□□□ -0.12
VARS2-210ENST00000490699 TEFQ10587 303 aa14.3□□□□□ -0.12
VARS2-210ENST00000490699 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
VARS2-210ENST00000490699 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
VARS2-210ENST00000490699 WDR63Q8IWG1 891 aa14.28□□□□□ -0.12
VARS2-210ENST00000490699 SHANK3Q9BYB0 1731 aa14.27□□□□□ -0.12
VARS2-210ENST00000490699 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
VARS2-210ENST00000490699 CYP27B1O15528 508 aa14.27□□□□□ -0.13
VARS2-210ENST00000490699 CABP4P57796 275 aa14.27□□□□□ -0.13
VARS2-210ENST00000490699 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
VARS2-210ENST00000490699 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
VARS2-210ENST00000490699 KRT27Q7Z3Y8 459 aa14.27□□□□□ -0.13
VARS2-210ENST00000490699 WWC1Q8IX03 1113 aa14.27□□□□□ -0.13
VARS2-210ENST00000490699 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
VARS2-210ENST00000490699 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
VARS2-210ENST00000490699 MCM10Q7L590 875 aa14.26□□□□□ -0.13
VARS2-210ENST00000490699 MYH16Q9H6N6 1097 aa14.26□□□□□ -0.13
VARS2-210ENST00000490699 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
VARS2-210ENST00000490699 SCN11AQ9UI33 1791 aa14.25□□□□□ -0.13
VARS2-210ENST00000490699 IL16Q14005 1332 aa14.25□□□□□ -0.13
VARS2-210ENST00000490699 ERVV-2B6SEH9 535 aa14.25□□□□□ -0.13
VARS2-210ENST00000490699 RNMTO43148 476 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms