RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 FANCIQ9NVI1 1328 aa12.25□□□□□ -0.45
USP34-218ENST00000490552 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
USP34-218ENST00000490552 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.25□□□□□ -0.45
USP34-218ENST00000490552 COL14A1Q05707 1796 aaKnown RBP12.24□□□□□ -0.45
USP34-218ENST00000490552 ZNF853P0CG23 659 aa12.24□□□□□ -0.45
USP34-218ENST00000490552 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
USP34-218ENST00000490552 EVA1CP58658 441 aa12.24□□□□□ -0.45
USP34-218ENST00000490552 BABAM1Q9NWV8 329 aa12.24□□□□□ -0.45
USP34-218ENST00000490552 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
USP34-218ENST00000490552 DLG5Q8TDM6 1919 aa12.24□□□□□ -0.45
USP34-218ENST00000490552 JCADQ9P266 1359 aa12.24□□□□□ -0.45
USP34-218ENST00000490552 FAM83GA6ND36 823 aa12.23□□□□□ -0.45
USP34-218ENST00000490552 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
USP34-218ENST00000490552 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
USP34-218ENST00000490552 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
USP34-218ENST00000490552 SPG7Q9UQ90 795 aa12.23□□□□□ -0.45
USP34-218ENST00000490552 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
USP34-218ENST00000490552 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
USP34-218ENST00000490552 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
USP34-218ENST00000490552 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.45
USP34-218ENST00000490552 CRB1P82279 1406 aa12.21□□□□□ -0.45
USP34-218ENST00000490552 ZNF530Q6P9A1 599 aaPredicted RBP12.21□□□□□ -0.45
USP34-218ENST00000490552 SPATA31A6Q5VVP1 1343 aa12.21□□□□□ -0.46
USP34-218ENST00000490552 CHL1O00533 1208 aa12.2□□□□□ -0.46
USP34-218ENST00000490552 FKBP8Q14318 412 aa12.2□□□□□ -0.46
USP34-218ENST00000490552 MCM10Q7L590 875 aa12.2□□□□□ -0.46
USP34-218ENST00000490552 BTG4Q9NY30 223 aa12.2□□□□□ -0.46
USP34-218ENST00000490552 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
USP34-218ENST00000490552 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
USP34-218ENST00000490552 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
USP34-218ENST00000490552 MBIPQ9NS73 344 aa12.2□□□□□ -0.46
USP34-218ENST00000490552 LAS1LQ9Y4W2 734 aaKnown RBP12.2□□□□□ -0.46
USP34-218ENST00000490552 CEMIPQ8WUJ3 1361 aa12.2□□□□□ -0.46
USP34-218ENST00000490552 EXOSC9Q06265 439 aaKnown RBP12.19□□□□□ -0.46
USP34-218ENST00000490552 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
USP34-218ENST00000490552 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
USP34-218ENST00000490552 IL2RBP14784 551 aa12.18□□□□□ -0.46
USP34-218ENST00000490552 ALDH1L2Q3SY69 923 aa12.18□□□□□ -0.46
USP34-218ENST00000490552 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
USP34-218ENST00000490552 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
USP34-218ENST00000490552 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
USP34-218ENST00000490552 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
USP34-218ENST00000490552 RARSP54136 660 aaKnown RBP12.18□□□□□ -0.46
USP34-218ENST00000490552 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
USP34-218ENST00000490552 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
USP34-218ENST00000490552 IL17REQ8NFR9 667 aa12.18□□□□□ -0.46
USP34-218ENST00000490552 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
USP34-218ENST00000490552 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
USP34-218ENST00000490552 MEGF6O75095 1541 aa12.17□□□□□ -0.46
USP34-218ENST00000490552 TEFQ10587 303 aa12.17□□□□□ -0.46
USP34-218ENST00000490552 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
USP34-218ENST00000490552 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
USP34-218ENST00000490552 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
USP34-218ENST00000490552 MS4A1P11836 297 aa12.16□□□□□ -0.46
USP34-218ENST00000490552 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
USP34-218ENST00000490552 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
USP34-218ENST00000490552 PKD1L3Q7Z443 1732 aa12.16□□□□□ -0.46
USP34-218ENST00000490552 PHKG2P15735 406 aa12.15□□□□□ -0.46
USP34-218ENST00000490552 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
USP34-218ENST00000490552 ZCRB1Q8TBF4 217 aaKnown RBP12.15□□□□□ -0.46
USP34-218ENST00000490552 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
USP34-218ENST00000490552 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
USP34-218ENST00000490552 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
USP34-218ENST00000490552 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
USP34-218ENST00000490552 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
USP34-218ENST00000490552 PDE3AQ14432 1141 aa12.15□□□□□ -0.46
USP34-218ENST00000490552 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
USP34-218ENST00000490552 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
USP34-218ENST00000490552 SLIT2O94813 1529 aa12.14□□□□□ -0.47
USP34-218ENST00000490552 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
USP34-218ENST00000490552 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
USP34-218ENST00000490552 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
USP34-218ENST00000490552 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
USP34-218ENST00000490552 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
USP34-218ENST00000490552 VAMP4O75379 141 aa12.13□□□□□ -0.47
USP34-218ENST00000490552 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
USP34-218ENST00000490552 SMC4Q9NTJ3 1288 aa12.13□□□□□ -0.47
USP34-218ENST00000490552 BCAR3O75815 825 aa12.13□□□□□ -0.47
USP34-218ENST00000490552 HOXB7P09629 217 aa12.12□□□□□ -0.47
USP34-218ENST00000490552 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
USP34-218ENST00000490552 LGR6Q9HBX8 967 aa12.12□□□□□ -0.47
USP34-218ENST00000490552 PPP4R2Q9NY27 417 aa12.12□□□□□ -0.47
USP34-218ENST00000490552 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 CYP27B1O15528 508 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 HSPA1LP34931 641 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 AAMPQ13685 434 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 ZKSCAN2Q63HK3 967 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 UNC5CLQ8IV45 518 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 SSH1Q8WYL5 1049 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 ARHGAP45Q92619 1136 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 NRAPQ86VF7 1730 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
USP34-218ENST00000490552 IRX6P78412 446 aaPredicted RBP12.1□□□□□ -0.47
USP34-218ENST00000490552 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 FNBP4Q8N3X1 1017 aaPredicted RBP12.1□□□□□ -0.47
USP34-218ENST00000490552 SLC52A2Q9HAB3 445 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms